CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12557	Soybean	nucleus	38.24	72.96
CDY70356	Canola	cytosol	68.98	69.17
VIT_11s0016g00830.t01	Wine grape	cytosol	69.52	69.15
Bra015169.1-P	Field mustard	cytosol	68.72	69.09
CDY33397	Canola	cytosol	68.72	68.9
AT2G05830.1	Thale cress	cytosol	68.18	68.18
PGSC0003DMT400064893	Potato	cytosol	68.18	68.18
Solyc08g022210.2.1	Tomato	cytosol, plastid	66.84	66.84
Zm00001d049042_P001	Maize	extracellular	64.44	65.67
KXG28235	Sorghum	cytosol	64.17	65.4
GSMUA_Achr6P29170_001	Banana	cytosol	63.64	61.82
TraesCS4D01G104900.1	Wheat	cytosol	59.63	60.76
TraesCS4A01G204000.2	Wheat	cytosol	62.3	58.1
HORVU4Hr1G016410.7	Barley	cytosol	60.43	53.68
TraesCS4B01G107800.1	Wheat	cytosol	61.76	50.99
VIT_17s0053g00580.t01	Wine grape	cytosol	9.09	46.58
CDY09484	Canola	cytosol	10.16	42.7
CDY04295	Canola	mitochondrion	21.12	33.19
Os11t0217300-01	Rice	cytosol, plasma membrane	12.03	12.75

Protein Annotations

KEGG:00270+5.3.1.23	Gene3D:1.20.120.1840	Gene3D:3.40.50.10470	MapMan:4.1.2.2.6.4.3	UniProt:A0A0R0IB61	EMBL:ACUP02005457
EnsemblPlantsGene:GLYMA_09G070700	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009086	GO:GO:0009987	GO:GO:0016853	GO:GO:0019284	GO:GO:0019509
GO:GO:0044237	GO:GO:0044249	GO:GO:0046523	InterPro:IF-2B-related	InterPro:IF-M1Pi	InterPro:Initiation_fac_2B_a/b/d
EnsemblPlants:KRH37507	ProteinID:KRH37507	ProteinID:KRH37507.1	HAMAP:MF_01678	InterPro:NagB/RpiA_transferase-like	PFAM:PF01008
PANTHER:PTHR43475	PANTHER:PTHR43475:SF1	MetaCyc:PWY-4361	MetaCyc:PWY-7174	SUPFAM:SSF100950	TIGRFAMs:TIGR00512
TIGRFAMs:TIGR00524	UniParc:UPI0006EDF72B	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:7215234..7218883

Molecular Weight (calculated)

40045.6 Da

IEP (calculated)

6.790

GRAVY (calculated)

-0.009

Length

374 amino acids

Sequence
(BLAST)

001: MAFESNEVAA TTLQAICYKR GSLQLLDQRK LPLETVYLEI RDSTDGWNAI REMVVRGAPA IAIAAALSLA VEVFNLDFNG SATDAVSLLQ KKLEYLVTSR
101: PTAVNLSDAA TKLKEVISNA AATTSEGRSV FQVYIDAAEV MLEDDVASNR AIGSYGASII QQQTEKQKLS VLTHCNTGSL ATAGYGTALG VIRALHSAGV
201: LKRAYCTETR PFNQVVSLVI CRSFKKGKDE EKKWGPLNQN TNFHYQRHVD AVVVGADRVA SNGDTANKIG TYSVALSAKF HNVPFYVAAP LTSIDLSLSS
301: GQEIVIEERS PKELLNTHGG LGEQIAASGI SVWNPAFDVT PANLISGIIT EKGVITKTSA GDAFDIKAFV QKTG

Best Arabidopsis Sequence Match ( AT2G05830.1 )
(BLAST)

001: MSGEGDTTLK AICYKPGSLQ LLDQRKLPLE TIYLEIRDAS DGWSAIQEMV VRGAPAIAIA AALSLAVEVF NFHGFDGSAS DAVAFLENKL DYLVSSRPTA
101: VNLADAALKL KHVIAKALAT ATEAKSIFKA YIEASEDMLE DDVVSNKAIG NFGLSLLRQQ AKNPDKLSVL THCNTGSLAT AGYGTALGVI RALHTQGILE
201: RAYCTETRPF NQGSRLTAFE LVHEKIPATL IADSAAAALM KDGRVDGVIV GADRVASNGD TANKIGTYSL ALCAKHHGIP FYVAAPLTSV DLSLSSGKEI
301: VIEERSPKEL MHTHGGLGER IAAPGISVWN PAFDMTPAEL IAGIITEKGV ITKNGNDTFD ISSFAKKITG NSSR

Arabidopsis Description

Methylthioribose-1-phosphate isomerase [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.