Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- nucleus 1
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09484 | Canola | cytosol | 27.4 | 22.47 |
| KRH12557 | Soybean | nucleus | 38.36 | 14.29 |
| VIT_11s0016g00830.t01 | Wine grape | cytosol | 63.01 | 12.23 |
| Bra015169.1-P | Field mustard | cytosol | 49.32 | 9.68 |
| CDY33397 | Canola | cytosol | 49.32 | 9.65 |
| CDY70356 | Canola | cytosol | 49.32 | 9.65 |
| AT2G05830.1 | Thale cress | cytosol | 47.95 | 9.36 |
| Zm00001d049042_P001 | Maize | extracellular | 46.58 | 9.26 |
| KRH37507 | Soybean | cytosol | 46.58 | 9.09 |
| PGSC0003DMT400064893 | Potato | cytosol | 46.58 | 9.09 |
| Solyc08g022210.2.1 | Tomato | cytosol, plastid | 46.58 | 9.09 |
| KXG28235 | Sorghum | cytosol | 45.21 | 8.99 |
| TraesCS4D01G104900.1 | Wheat | cytosol | 45.21 | 8.99 |
| CDY04295 | Canola | mitochondrion | 28.77 | 8.82 |
| TraesCS4A01G204000.2 | Wheat | cytosol | 46.58 | 8.48 |
| HORVU4Hr1G016410.7 | Barley | cytosol | 47.95 | 8.31 |
| GSMUA_Achr6P29170_001 | Banana | cytosol | 42.47 | 8.05 |
| TraesCS4B01G107800.1 | Wheat | cytosol | 45.21 | 7.28 |
| Os11t0217300-01 | Rice | cytosol, plasma membrane | 8.22 | 1.7 |
Protein Annotations
| Gene3D:1.20.120.1840 | MapMan:35.1 | ProteinID:CCB58800 | ProteinID:CCB58800.1 | UniProt:F6HVT7 | EMBL:FN596258 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019509 | GO:GO:0046523 | InterPro:NagB/RpiA_transferase-like | PANTHER:PTHR43475 | PANTHER:PTHR43475:SF1 | SUPFAM:SSF100950 |
| UniParc:UPI000210A1B0 | ArrayExpress:VIT_17s0053g00580 | EnsemblPlantsGene:VIT_17s0053g00580 | EnsemblPlants:VIT_17s0053g00580.t01 | : | : |
Description
No Description!
Coordinates
chr17:+:15528854..15532168
Molecular Weight (calculated)
7534.0 Da
IEP (calculated)
6.786
GRAVY (calculated)
0.047
Length
73 amino acids
Sequence
(BLAST)
(BLAST)
1: MLREDVAANR ATGLYGASFL RGHIKNSKGL SILTHCNTGS LAIAGYGTAL DVDITPEDPH VGLGGLQDAL RAA
001: MVVRGAPAIA IAAALSLAVE VFNFHGFDGS ASDAVAFLEN KLDYLVSSRP TAVNLADAAL KLKHVIAKAL ATATEAKSIF KAYIEASEDM LEDDVVSNKA
101: IGNFGLSLLR QQAKNPDKLS VLTHCNTGSL ATAGYGTALG VIRALHTQGI LERAYCTETR PFNQGSRLTA FELVHEKIPA TLIADSAAAA LMKDGRVDGV
201: IVGADRVASN GDTANKIGTY SLALCAKHHG IPFYVAAPLT SVDLSLSSGK EIVIEERSPK ELMHTHGGLG ERIAAPGISV WNPAFDMTPA ELIAGIITEK
301: GVITKNGNDT FDISSFAKKI TGNSSR
101: IGNFGLSLLR QQAKNPDKLS VLTHCNTGSL ATAGYGTALG VIRALHTQGI LERAYCTETR PFNQGSRLTA FELVHEKIPA TLIADSAAAA LMKDGRVDGV
201: IVGADRVASN GDTANKIGTY SLALCAKHHG IPFYVAAPLT SVDLSLSSGK EIVIEERSPK ELMHTHGGLG ERIAAPGISV WNPAFDMTPA ELIAGIITEK
301: GVITKNGNDT FDISSFAKKI TGNSSR
Arabidopsis Description
Methylthioribose-1-phosphate isomerase [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.