Factsheet for Os11t0217300-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g022210.2.1	Tomato	cytosol, plastid	16.71	15.78
PGSC0003DMT400064893	Potato	cytosol	16.15	15.24
Os11t0216900-02	Rice	cytosol	15.58	14.71
Bra015169.1-P	Field mustard	cytosol	14.73	13.98
CDY33397	Canola	cytosol	14.73	13.94
VIT_11s0016g00830.t01	Wine grape	cytosol	14.73	13.83
CDY70356	Canola	cytosol	14.45	13.67
AT2G05830.1	Thale cress	cytosol	14.16	13.37
KRH12557	Soybean	nucleus	7.08	12.76
KRH37507	Soybean	cytosol	12.75	12.03
CDY09484	Canola	cytosol	2.55	10.11
VIT_17s0053g00580.t01	Wine grape	cytosol	1.7	8.22
CDY04295	Canola	mitochondrion	5.38	7.98

Protein Annotations

MapMan:3.13.3.2.4	Gene3D:3.30.230.120	EntrezGene:4350084	ProteinID:ABA92068.1	ProteinID:BAF27875.1	ProteinID:BAT13226.1
ProteinID:EAZ17832.1	InterPro:GHMP_kinase_C_dom	InterPro:GHMP_kinase_C_sf	InterPro:GHMP_kinase_N_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0042546	GO:GO:0047940	InterPro:IPR036554	EnsemblPlantsGene:Os11g0217300
EnsemblPlants:Os11t0217300-01	PFAM:PF00288	PFAM:PF08544	PRINTS:PR00959	PANTHER:PTHR43290	PANTHER:PTHR43290:SF1
UniProt:Q2R8T7	InterPro:Ribosomal_S5_D2-typ_fold	SUPFAM:SSF54211	SUPFAM:SSF55060	UniParc:UPI0000682419	RefSeq:XP_015617202.1
RefSeq:XP_015617203.1	:	:	:	:	:

Description

Mevalonate and galactokinase family protein. (Os11t0217300-01)

Coordinates

chr11:+:6109578..6113725

Molecular Weight (calculated)

38811.9 Da

IEP (calculated)

6.582

GRAVY (calculated)

-0.034

Length

353 amino acids

Sequence
(BLAST)

001: MTEQEHRAYA RVGLLGNPSD MYGGKTLSFT ISNFWATVHL APSDDGGPLV IRPHPRHDLV DFASLPQLVT RLQNEGYNGG VRLLMAICKV FYSHCIQHGI
101: ALKEQNFTLS YDTNIPRQAG LSGSSAIICA ALSCLLDFYN VRHLIKVEIR PNIILDAEKE LGIVAGLQDR VAQVYGGLVY MDFGKEHMDT LGHGVYTPLD
201: INLLPPLHLI YADNPSDSGK VHSTVRQRWL DGEEFIISSM EEVARLALDG RKALLDKNYR ELARLMNRNF DLRRQMFGDD VIGTVNIKMV EAARSVGAAA
301: KFTGSGGAVV ALCPDGEAQV LLLEKACRDA GFLVQRIQVA PSPLPLTEGN PPF

Best Arabidopsis Sequence Match ( AT3G01640.2 )
(BLAST)

001: MDMLKKESKK RVREEKMDPN STVSGDGQAT AAIEHRSFAR IGFLGNPSDV YFGRTISLTI GNFWASVKLE PSEHLVIKPH PFHDLVQFTS LDHLLNRLQN
101: EGYYGGVRLL MAICKVFRNY CKENDIQLHQ ANFSLSYDTN IPRQTGLSGS SAIVSAALNC LLDFYNVRHL IKVQVRPNIV LSAEKELGIV AGLQDRVAQV
201: YGGLVHMDFS KEHMDKLGHG IYTPMDISLL PPLHLIYAEN PSDSGKVHSM VRQRWLDGDE FIISSMKEVG SLAEEGRTAL LNKDHSKLVE LMNLNFDIRR
301: RMFGDECLGA MNIEMVEVAR RVGAASKFTG SGGAVVVFCP EGPSQVKLLE EECRKAGFTL QPVKIAPSCL NDSDIQTL

Arabidopsis Description

ATGLCAKGlucuronokinase G [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.