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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • nucleus 1
  • plastid 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:cytosol
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, mitochondrion, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG28235 Sorghum cytosol 85.03 86.65
Zm00001d049042_P001 Maize extracellular 84.22 85.83
TraesCS4D01G104900.1 Wheat cytosol 80.75 82.29
TraesCS4A01G204000.2 Wheat cytosol 84.22 78.55
GSMUA_Achr6P29170_001 Banana cytosol 76.47 74.29
HORVU4Hr1G016410.7 Barley cytosol 81.55 72.45
TraesCS4B01G107800.1 Wheat cytosol 83.16 68.65
Os11t0217300-01 Rice cytosol, plasma membrane 14.71 15.58
Protein Annotations
KEGG:00270+5.3.1.23Gene3D:1.20.120.1840Gene3D:3.40.50.10470MapMan:4.1.2.2.6.4.3EntrezGene:4350083ProteinID:ABA92066.2
EMBL:AK060549ProteinID:BAF27874.1ProteinID:BAT13224.1EMBL:BR000390ProteinID:EEE51856.1GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737
GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0008652GO:GO:0009058GO:GO:0009086
GO:GO:0009506GO:GO:0009719GO:GO:0009987GO:GO:0016853GO:GO:0019509GO:GO:0044237
GO:GO:0044249GO:GO:0046523GO:GO:0071281GO:GO:0071369GO:GO:0071732InterPro:IF-2B-related
InterPro:IF-M1PiInterPro:Initiation_fac_2B_a/b/dHAMAP:MF_01678InterPro:NagB/RpiA_transferase-likeEnsemblPlantsGene:Os11g0216900EnsemblPlants:Os11t0216900-02
PFAM:PF01008PANTHER:PTHR43475PANTHER:PTHR43475:SF1UniProt:Q0ITU1SUPFAM:SSF100950TIGRFAMs:TIGR00512
TIGRFAMs:TIGR00524UniParc:UPI000068241ARefSeq:XP_015617957.1RefSeq:XP_015617958.1SEG:seg:
Description
Fe-deficiency-induced protein 2Similar to IDI2. (Os11t0216900-01);Similar to IDI2. (Os11t0216900-02);Similar to IDI2. (Os11t0216900-03)
Coordinates
chr11:+:6102867..6106487
Molecular Weight (calculated)
39510.1 Da
IEP (calculated)
4.989
GRAVY (calculated)
0.112
Length
374 amino acids
Sequence
(BLAST)
001: MGELGALQSI VYHRGSLRLL DQRKLPLEVD YIDVKCSGDG WNAIRDMVVR GAPAIAIAAA LALAVEVSGL EDFTGTPAEA AVFVSEKLEY LVSSRPTAVN
101: LSDAATKLRS LVSRTAETEK DAKAIFQAYI DAAETMLVDD VSDNKAIGSH GAEFLKQKLE VSKDISVLTH CNTGSLATAG YGTALGVIRA LHSGGILEKA
201: FCTETRPFNQ GSRLTAFELV HDKVPATLIA DSAAAALMKS GCIQAVIVGA DRIAANGDTA NKIGTYNLAI SAKHHGVQFY VAAPITSIDL SLPSGEQIVI
301: EERSPNELLN SEGGLGKQVA ASGISVWNPA FDVTPANLIT AIITEKGVIT KSDADETFNI KDFIQSAKLY STMQ
Best Arabidopsis Sequence Match ( AT2G05830.1 )
(BLAST)
001: MSGEGDTTLK AICYKPGSLQ LLDQRKLPLE TIYLEIRDAS DGWSAIQEMV VRGAPAIAIA AALSLAVEVF NFHGFDGSAS DAVAFLENKL DYLVSSRPTA
101: VNLADAALKL KHVIAKALAT ATEAKSIFKA YIEASEDMLE DDVVSNKAIG NFGLSLLRQQ AKNPDKLSVL THCNTGSLAT AGYGTALGVI RALHTQGILE
201: RAYCTETRPF NQGSRLTAFE LVHEKIPATL IADSAAAALM KDGRVDGVIV GADRVASNGD TANKIGTYSL ALCAKHHGIP FYVAAPLTSV DLSLSSGKEI
301: VIEERSPKEL MHTHGGLGER IAAPGISVWN PAFDMTPAEL IAGIITEKGV ITKNGNDTFD ISSFAKKITG NSSR
Arabidopsis Description
Methylthioribose-1-phosphate isomerase [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.