Factsheet for Bra012258.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra005880.1-P	cytoskeleton, cytosol
Bra006369.1-P
Bra006595.1-P
Bra008973.1-P
Bra011769.1-P	cytosol
Bra014096.1-P
Bra015169.1-P
Bra016640.1-P	nucleus
Bra017408.1-P
Bra018296.1-P
Bra023896.1-P
Bra026065.1-P	nucleus
Bra028741.1-P	cytoskeleton, cytosol
Bra031349.1-P
Bra032422.1-P
Bra033467.1-P
Bra034380.1-P
Bra039723.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G20930.1	Bra016640.1-P	AT1G16330.1	20407024
AT1G20930.1	Bra026065.1-P	AT1G16330.1	20407024
AT1G20930.1	Bra014096.1-P	AT1G47870.1	20407024
AT1G20930.1	Bra023896.1-P	AT1G51650.1	20706207
AT1G20930.1	Bra015169.1-P	AT2G05830.1	20706207
AT1G20930.1	Bra034380.1-P	AT2G27970.1	20407024
AT1G20930.1	Bra000214.1-P	AT2G41090.1	17360592
AT1G20930.1	Bra000214.1-P	AT2G41100.1	17360592
AT1G20930.1	Bra006369.1-P	AT3G11270.1	20706207
AT1G20930.1	Bra017408.1-P	AT3G11270.1	20706207
AT1G20930.1	Bra032422.1-P	AT3G11270.1	20706207
AT1G20930.1	Bra031349.1-P	AT3G22310.1	20706207
AT1G20930.1	Bra018296.1-P	AT3G51920.1	17360592
AT1G20930.1	Bra033467.1-P	AT3G51920.1	17360592
AT1G20930.1	Bra039723.1-P	AT4G14640.1	17360592
AT1G20930.1	Bra011769.1-P	AT4G37490.1	20407024
AT1G20930.1	Bra005880.1-P	AT5G06150.1	20407024
AT1G20930.1	Bra028741.1-P	AT5G06150.1	20407024
AT1G20930.1	Bra005880.1-P	AT5G06150.1	20407024
AT1G20930.1	Bra028741.1-P	AT5G06150.1	20407024
AT1G20930.1	Bra008973.1-P	AT5G11300.1	20407024
AT1G20930.1	Bra002368.1-P	AT5G21274.1	17360592
AT1G20930.1	Bra006595.1-P	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31856	Canola	cytosol	100.0	100.0
CDY01345	Canola	cytosol	100.0	100.0
AT1G20930.1	Thale cress	cytosol	94.94	95.24
Bra015735.1-P	Field mustard	cytosol	86.39	87.22
KRH37522	Soybean	cytosol	85.76	85.49
KRH06014	Soybean	cytosol	84.18	84.71
KRH48128	Soybean	cytosol	83.86	84.13
GSMUA_Achr3P03700_001	Banana	cytosol	77.85	81.46
Solyc04g082840.2.1	Tomato	cytosol	80.7	80.95
PGSC0003DMT400025910	Potato	cytosol	80.7	80.95
VIT_18s0122g00550.t01	Wine grape	cytosol	82.59	80.81
KRH17547	Soybean	cytosol	84.18	78.93
GSMUA_Achr9P12350_001	Banana	cytosol	74.37	72.98
TraesCS7A01G248700.1	Wheat	cytosol	75.0	72.7
TraesCS7B01G142600.1	Wheat	cytosol	75.0	72.7
TraesCS7D01G247700.1	Wheat	cytosol	75.0	72.7
Os08t0512600-01	Rice	cytosol, plasma membrane	74.37	72.09
GSMUA_Achr11P...	Banana	cytosol	75.95	71.86
EER90152	Sorghum	cytosol, mitochondrion, peroxisome	73.42	71.38
Zm00001d031485_P001	Maize	mitochondrion	73.73	70.82
Zm00001d046912_P001	Maize	cytosol, mitochondrion, peroxisome	72.78	70.77
Bra014835.1-P	Field mustard	cytosol	63.92	66.45
HORVU7Hr1G051180.3	Barley	cytosol	68.67	64.97
Bra000077.1-P	Field mustard	cytosol, nucleus, plasma membrane	63.29	64.1
OQU80908	Sorghum	mitochondrion	73.42	54.98
Bra018036.1-P	Field mustard	cytosol	50.63	54.42
Bra029917.1-P	Field mustard	cytosol	51.27	51.92
Bra029230.1-P	Field mustard	cytosol, mitochondrion	42.09	40.55
Bra031013.1-P	Field mustard	cytosol	39.87	33.42
Bra016572.1-P	Field mustard	cytosol	40.19	32.32
Bra015974.1-P	Field mustard	cytosol	40.51	32.24
Bra037748.1-P	Field mustard	cytosol	40.51	27.35
Bra025077.1-P	Field mustard	cytosol	31.65	23.15
Bra038825.1-P	Field mustard	cytosol	31.65	23.09
Bra020977.1-P	Field mustard	cytosol	32.91	22.56
Bra019550.1-P	Field mustard	nucleus	38.61	21.9
Bra004236.1-P	Field mustard	nucleus	45.25	20.17
Bra021977.1-P	Field mustard	cytosol	19.94	17.75
Bra017602.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	31.01	17.28

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.2	MapMan:18.4.3.1.2	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra012258	EnsemblPlants:Bra012258.1
EnsemblPlants:Bra012258.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009653	GO:GO:0009719	GO:GO:0009755
GO:GO:0009934	GO:GO:0009987	GO:GO:0010389	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0046777	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4D6Z8	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF322	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000254157F	:	:

Description

AT1G20930 (E=4e-174) CDKB2;2 | CDKB2;2 (CYCLIN-DEPENDENT KINASE B2;2); cyclin-dependent protein kinase/ kinase

Coordinates

chrA07:+:9032972..9034479

Molecular Weight (calculated)

35877.8 Da

IEP (calculated)

9.158

GRAVY (calculated)

-0.290

Length

316 amino acids

Sequence
(BLAST)

001: MENNGVKSAA SSAMEAFEKL EKVGEGTYGK VYRAREKATG LIVALKKTRL HEDEEGVPPT TLREISILRM LARDPHIVRL MDVKQGLNKE GKTVLYLVFE
101: YVDTDLKKFI RSFKQAGQNI PQNTVKSLMY QLCKGMAFCH GHGVLHRDLK PHNLLMDRQK MTLKIADLGL ARAFTLPMKK YTHEILTLWY RAPEVLLGAT
201: HYSTAVDMWS VGCIFAELVN KQAIFAGDSE LQQLLSIFRL LGTPNEQVWP GVSKLKDWHE YPQWKPLSLS TAVPNLDESG LDLLSKMLEY EPVKRISAKK
301: AMEHPYFDDL PDKSSL

Best Arabidopsis Sequence Match ( AT1G20930.1 )
(BLAST)

001: MDNNGVKPAV SAMEAFEKLE KVGEGTYGKV YRAREKATGM IVALKKTRLH EDEEGVPPTT LREISILRML ARDPHIVRLM DVKQGINKEG KTVLYLVFEY
101: VDTDLKKFIR SFRQAGQNIP QNTVKCLMYQ LCKGMAFCHG HGVLHRDLKP HNLLMDRKTM TLKIADLGLA RAFTLPMKKY THEILTLWYR APEVLLGATH
201: YSTGVDMWSV GCIFAELVTK QAIFAGDSEL QQLLRIFRLL GTPNEEVWPG VSKLKDWHEY PQWKPLSLST AVPNLDEAGL DLLSKMLEYE PAKRISAKKA
301: MEHPYFDDLP DKSSL

Arabidopsis Description

CDKB2-2Cyclin-dependent kinase B2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG64]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.