Factsheet for Bra015735.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000822.1-P	nucleus
Bra001736.1-P	nucleus
Bra003563.1-P	nucleus
Bra005763.1-P	cytosol, nucleus
Bra005880.1-P	cytoskeleton, cytosol
Bra007901.1-P
Bra008477.1-P	nucleus
Bra008973.1-P	nucleus
Bra009031.1-P	cytosol, nucleus
Bra011501.1-P
Bra011769.1-P	cytosol
Bra012894.1-P	nucleus
Bra015735.1-P	cytosol, nucleus
Bra016640.1-P	nucleus
Bra016654.1-P	nucleus
Bra017629.1-P
Bra017840.1-P	nucleus
Bra018036.1-P
Bra018376.1-P
Bra022391.1-P	nucleus
Bra023606.1-P	nucleus
Bra024504.1-P
Bra026065.1-P	nucleus
Bra026120.1-P	nucleus
Bra026756.1-P	nucleus
Bra028741.1-P	cytoskeleton, cytosol
Bra029917.1-P
Bra031463.1-P	nucleus
Bra032202.1-P	nucleus
Bra033658.1-P	nucleus
Bra034198.1-P	nucleus
Bra034380.1-P	cytosol, nucleus
Bra034612.1-P
Bra035186.1-P	nucleus
Bra036095.1-P	nucleus
Bra037265.1-P
Bra039199.1-P	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G76540.1	Bra016654.1-P	AT1G15570.1	20407024
AT1G76540.1	Bra026120.1-P	AT1G15570.1	20407024
AT1G76540.1	Bra026756.1-P	AT1G15570.1	20407024
AT1G76540.1	Bra016640.1-P	AT1G16330.1	20407024
AT1G76540.1	Bra026065.1-P	AT1G16330.1	20407024
AT1G76540.1	Bra023606.1-P	AT1G44110.1	20407024
AT1G76540.1	Bra032202.1-P	AT1G44110.1	20407024
AT1G76540.1	Bra007901.1-P	AT1G70210.1	12857813
AT1G76540.1	Bra015735.1-P	AT1G76540.1	20407024
AT1G76540.1	Bra015735.1-P	AT1G76540.1	20407024
AT1G76540.1	Bra000822.1-P	AT1G80370.1	20407024
AT1G76540.1	Bra003563.1-P	AT1G80370.1	20407024
AT1G76540.1	Bra008477.1-P	AT1G80370.1	20407024
AT1G76540.1	Bra031463.1-P	AT1G80370.1	20407024
AT1G76540.1	Bra035186.1-P	AT1G80370.1	20407024
AT1G76540.1	Bra024504.1-P	AT2G17620.1	12857813
AT1G76540.1	Bra037265.1-P	AT2G17620.1	12857813
AT1G76540.1	Bra039199.1-P	AT2G23430.1	20407024
AT1G76540.1	Bra034380.1-P	AT2G27970.1	20407024
AT1G76540.1	Bra034380.1-P	AT2G27970.1	20407024
AT1G76540.1	Bra001736.1-P	AT3G19150.1	20407024
AT1G76540.1	Bra022391.1-P	AT3G19150.1	20407024
AT1G76540.1	Bra018036.1-P	AT3G48750.1	10420643
AT1G76540.1	Bra029917.1-P	AT3G48750.1	10420643
AT1G76540.1	Bra018376.1-P	AT3G49520.1	20706207
AT1G76540.1	Bra012894.1-P	AT3G50630.1	20407024
AT1G76540.1	Bra036095.1-P	AT3G50630.1	20407024
AT1G76540.1	Bra034198.1-P	AT4G03270.1	20407024
AT1G76540.1	Bra011501.1-P	AT4G34160.1	12857813
AT1G76540.1	Bra017629.1-P	AT4G34160.1	12857813
AT1G76540.1	Bra034612.1-P	AT4G34160.1	12857813
AT1G76540.1	Bra011769.1-P	AT4G37490.1	20407024
AT1G76540.1	Bra017840.1-P	AT4G37630.1	20407024
AT1G76540.1	Bra005763.1-P	AT5G03415.1	20407024
AT1G76540.1	Bra005763.1-P	AT5G03415.1	20407024
AT1G76540.1	Bra005880.1-P	AT5G06150.1	20407024
AT1G76540.1	Bra028741.1-P	AT5G06150.1	20407024
AT1G76540.1	Bra005880.1-P	AT5G06150.1	20407024
AT1G76540.1	Bra028741.1-P	AT5G06150.1	20407024
AT1G76540.1	Bra009031.1-P	AT5G10440.1	20407024
AT1G76540.1	Bra009031.1-P	AT5G10440.1	20407024
AT1G76540.1	Bra008973.1-P	AT5G11300.1	12857813
AT1G76540.1	Bra008973.1-P	AT5G11300.1	20407024
AT1G76540.1	Bra033658.1-P	AT5G43080.1	20407024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87588	Canola	cytosol	99.68	99.68
CDX88294	Canola	cytosol	98.72	98.72
AT1G76540.1	Thale cress	cytosol	92.33	92.33
Bra012258.1-P	Field mustard	cytosol	87.22	86.39
KRH06014	Soybean	cytosol	84.03	83.76
KRH37522	Soybean	cytosol	84.34	83.28
GSMUA_Achr3P03700_001	Banana	cytosol	79.23	82.12
Solyc04g082840.2.1	Tomato	cytosol	82.11	81.59
PGSC0003DMT400025910	Potato	cytosol	82.11	81.59
KRH48128	Soybean	cytosol	81.79	81.27
VIT_18s0122g00550.t01	Wine grape	cytosol	82.43	79.88
KRH17547	Soybean	cytosol	84.03	78.04
GSMUA_Achr9P12350_001	Banana	cytosol	76.68	74.53
GSMUA_Achr11P...	Banana	cytosol	77.96	73.05
TraesCS7D01G247700.1	Wheat	cytosol	75.08	72.09
TraesCS7B01G142600.1	Wheat	cytosol	75.08	72.09
TraesCS7A01G248700.1	Wheat	cytosol	75.08	72.09
EER90152	Sorghum	cytosol, mitochondrion, peroxisome	74.44	71.69
Zm00001d046912_P001	Maize	cytosol, mitochondrion, peroxisome	74.12	71.38
Os08t0512600-01	Rice	cytosol, plasma membrane	73.8	70.86
Zm00001d031485_P001	Maize	mitochondrion	73.16	69.6
Bra014835.1-P	Field mustard	cytosol	62.94	64.8
HORVU7Hr1G051180.3	Barley	cytosol	68.37	64.07
Bra000077.1-P	Field mustard	cytosol, nucleus, plasma membrane	63.58	63.78
OQU80908	Sorghum	mitochondrion	73.48	54.5
Bra018036.1-P	Field mustard	cytosol	50.48	53.74
Bra029917.1-P	Field mustard	cytosol	51.44	51.6
Bra029230.1-P	Field mustard	cytosol, mitochondrion	41.53	39.63
Bra031013.1-P	Field mustard	cytosol	40.89	33.95
Bra016572.1-P	Field mustard	cytosol	40.58	32.32
Bra015974.1-P	Field mustard	cytosol	40.89	32.24
Bra037748.1-P	Field mustard	cytosol	39.62	26.5
Bra025077.1-P	Field mustard	cytosol	31.31	22.69
Bra020977.1-P	Field mustard	cytosol	33.23	22.56
Bra038825.1-P	Field mustard	cytosol	30.67	22.17
Bra019550.1-P	Field mustard	nucleus	37.7	21.18
Bra004236.1-P	Field mustard	nucleus	45.05	19.89
Bra017602.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	31.31	17.28
Bra021977.1-P	Field mustard	cytosol	19.49	17.18

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.2	MapMan:18.4.3.1.2	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra015735	EnsemblPlants:Bra015735.1
EnsemblPlants:Bra015735.1-P	GO:GO:0000166	GO:GO:0000307	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004693	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009653	GO:GO:0009719	GO:GO:0009755	GO:GO:0009934
GO:GO:0009987	GO:GO:0010389	GO:GO:0016043	GO:GO:0016301	GO:GO:0016572	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4DGV9	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF322	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00025420DB	:	:

Description

AT1G76540 (E=5e-171) CDKB2;1 | CDKB2;1 (cyclin-dependent kinase B2;1); cyclin-dependent protein kinase/ kinase/ protein binding

Coordinates

chrA07:-:21097893..21099552

Molecular Weight (calculated)

35699.7 Da

IEP (calculated)

8.941

GRAVY (calculated)

-0.259

Length

313 amino acids

Sequence
(BLAST)

001: MDKEVIAVSA MDAFEKLEKV GEGTYGKVYR AREKATGKIV ALKKTRLHED EEGVPSTTLR EISILRMLAR DPHIVRLMDV KQGLSKDGKT VLYLVFEYMD
101: TDVKKYIRSF RQTGDNIPPQ IVKSLMYQLC KGMAFCHGHG VLHRDLKPHN LLMDPKTMRL KIADLGLARA FTLPMKKYTH EILTLWYRAP EVLLGATHYS
201: TAVDMWSVGC VFAELVTNQA IFAGDSELQQ LLHIFRLLGT PNEEMWPGVS TLKNWHEYPQ WKPLSLSTSV PKLDQAGLDL LSKMLQYEPA KRISAKMAME
301: HPYFDDLQDK SSL

Best Arabidopsis Sequence Match ( AT1G76540.1 )
(BLAST)

001: MDEGVIAVSA MDAFEKLEKV GEGTYGKVYR AREKATGKIV ALKKTRLHED EEGVPSTTLR EISILRMLAR DPHVVRLMDV KQGLSKEGKT VLYLVFEYMD
101: TDVKKFIRSF RSTGKNIPTQ TIKSLMYQLC KGMAFCHGHG ILHRDLKPHN LLMDPKTMRL KIADLGLARA FTLPMKKYTH EILTLWYRAP EVLLGATHYS
201: TAVDMWSVGC IFAELVTNQA IFQGDSELQQ LLHIFKLFGT PNEEMWPGVS TLKNWHEYPQ WKPSTLSSAV PNLDEAGVDL LSKMLQYEPA KRISAKMAME
301: HPYFDDLPEK SSL

Arabidopsis Description

CDKB2-1CDKB2 [Source:UniProtKB/TrEMBL;Acc:A0A178WJF2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.