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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000413.1-P
Bra000837.1-P
Bra003438.1-P
Bra004140.1-P
Bra004566.1-P
Bra007220.1-P
Bra007576.1-P
Bra009031.1-P nucleus
Bra010457.1-P
Bra010722.1-P
Bra011500.1-P
Bra011501.1-P nucleus
Bra012909.1-P nucleus
Bra013838.1-P
Bra013899.1-P
Bra015169.1-P
Bra017628.1-P
Bra017629.1-P nucleus
Bra017840.1-P nucleus
Bra018036.1-P
Bra019155.1-P
Bra022520.1-P
Bra023783.1-P
Bra023896.1-P
Bra028145.1-P
Bra028703.1-P
Bra029917.1-P
Bra029992.1-P nucleus
Bra030777.1-P
Bra032191.1-P
Bra033582.1-P
Bra034198.1-P nucleus
Bra034200.1-P
Bra034380.1-P
Bra034611.1-P
Bra034612.1-P nucleus
Bra034916.1-P
Bra037096.1-P
Bra039289.1-P
Bra040033.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G50630.1 Bra030777.1-P AT1G09430.1 20706207
AT3G50630.1 Bra000413.1-P AT1G14620.1 20706207
AT3G50630.1 Bra004566.1-P AT1G14620.1 20706207
AT3G50630.1 Bra039289.1-P AT1G14620.1 20706207
AT3G50630.1 Bra032191.1-P AT1G43700.1 20706207
AT3G50630.1 Bra034916.1-P AT1G43700.1 20706207
AT3G50630.1 Bra023896.1-P AT1G51650.1 20706207
AT3G50630.1 Bra037096.1-P AT1G55890.1 20706207
AT3G50630.1 Bra004140.1-P AT2G03820.1 20706207
AT3G50630.1 Bra040033.1-P AT2G03820.1 20706207
AT3G50630.1 Bra015169.1-P AT2G05830.1 20706207
AT3G50630.1 Bra034380.1-P AT2G27970.1 20706207
AT3G50630.1 Bra018036.1-P AT3G48750.1 10758489
AT3G50630.1 Bra029917.1-P AT3G48750.1 10758489
AT3G50630.1 Bra018036.1-P AT3G48750.1 11449057
AT3G50630.1 Bra029917.1-P AT3G48750.1 11449057
AT3G50630.1 Bra018036.1-P AT3G48750.1 20706207
AT3G50630.1 Bra029917.1-P AT3G48750.1 20706207
AT3G50630.1 Bra018036.1-P AT3G48750.1 21798944
AT3G50630.1 Bra029917.1-P AT3G48750.1 21798944
AT3G50630.1 Bra018036.1-P AT3G48750.1 9753775
AT3G50630.1 Bra029917.1-P AT3G48750.1 9753775
AT3G50630.1 Bra012909.1-P AT3G50070.1 20407024
AT3G50630.1 Bra029992.1-P AT3G50070.1 20407024
AT3G50630.1 Bra023783.1-P AT3G55760.1 20706207
AT3G50630.1 Bra007220.1-P AT3G56150.1 20706207
AT3G50630.1 Bra022520.1-P AT3G56150.1 20706207
AT3G50630.1 Bra003438.1-P AT3G61140.1 20706207
AT3G50630.1 Bra007576.1-P AT3G61140.1 20706207
AT3G50630.1 Bra034198.1-P AT4G03270.1 20407024
AT3G50630.1 Bra000837.1-P AT4G03280.1 20706207
AT3G50630.1 Bra034200.1-P AT4G03280.1 20706207
AT3G50630.1 Bra013838.1-P AT4G24820.1 20706207
AT3G50630.1 Bra010457.1-P AT4G25550.1 20706207
AT3G50630.1 Bra013899.1-P AT4G25550.1 20706207
AT3G50630.1 Bra019155.1-P AT4G25550.1 20706207
AT3G50630.1 Bra011500.1-P AT4G34150.1 20706207
AT3G50630.1 Bra017628.1-P AT4G34150.1 20706207
AT3G50630.1 Bra034611.1-P AT4G34150.1 20706207
AT3G50630.1 Bra011501.1-P AT4G34160.1 20407024
AT3G50630.1 Bra017629.1-P AT4G34160.1 20407024
AT3G50630.1 Bra034612.1-P AT4G34160.1 20407024
AT3G50630.1 Bra017840.1-P AT4G37630.1 20407024
AT3G50630.1 Bra017840.1-P AT4G37630.1 20706207
AT3G50630.1 Bra010722.1-P AT4G38900.1 20706207
AT3G50630.1 Bra033582.1-P AT4G38900.1 20706207
AT3G50630.1 Bra028703.1-P AT5G07310.1 20706207
AT3G50630.1 Bra009031.1-P AT5G10440.1 20407024
AT3G50630.1 Bra009031.1-P AT5G10440.1 20706207
AT3G50630.1 Bra028145.1-P AT5G37720.1 20706207
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY17793 Canola nucleus 93.94 92.81
Bra012894.1-P Field mustard nucleus 64.24 50.0
AT3G50630.1 Thale cress nucleus 58.18 45.93
Protein Annotations
MapMan:13.1.1.3.1Gene3D:4.10.365.10EnsemblPlantsGene:Bra036095EnsemblPlants:Bra036095.1EnsemblPlants:Bra036095.1-PInterPro:CDI
GO:GO:0003674GO:GO:0004861GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006464GO:GO:0007049GO:GO:0007050GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0019538GO:GO:0030234GO:GO:0071901UniProt:M4F4U1PFAM:PF02234PIRSF:PIRSF017811
UniParc:UPI0002542BE8SEG:seg::::
Description
AT3G50630 (E=5e-022) KRP2, ICK2 | KRP2 (KIP-RELATED PROTEIN 2); cyclin-dependent protein kinase inhibitor/ kinase inhibitor/ protein binding
Coordinates
chrA09:+:25273276..25273930
Molecular Weight (calculated)
19238.9 Da
IEP (calculated)
4.390
GRAVY (calculated)
-1.228
Length
165 amino acids
Sequence
(BLAST)
001: MAAGEVGRRR EGETADENEK TNVKRRKLEE EEESRILILS HNPSSEYDLL DSASSSSSVS CCSSSEEKSK RRTDGGEFDQ TETFWIYYDN RRVPEEEESV
101: NEVESCRVKK QKRCETVKEA EMEDFFQAAE KDVRNNMLEC SSKYSFDFEK DEPLDGRYEW VKLNP
Best Arabidopsis Sequence Match ( AT3G50630.1 )
(BLAST)
001: MAAVRRRERD VVEENGVTTT TVKRRKMEEE VDLVESRIIL SPCVQATNRG GIVARNSAGA SETSVVIVRR RDSPPVEEQC QIEEEDSSVS CCSTSEEKSK
101: RRIEFVDLEE NNGDDRETET SWIYDDLNKS EESMNMDSSS VAVEDVESRR RLRKSLHETV KEAELEDFFQ VAEKDLRNKL LECSMKYNFD FEKDEPLGGG
201: RYEWVKLNP
Arabidopsis Description
KRP2Cyclin-dependent kinase inhibitor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCR2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.