Factsheet for Bra012894.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000413.1-P
Bra000837.1-P
Bra003438.1-P
Bra004140.1-P
Bra004566.1-P
Bra007220.1-P
Bra007576.1-P
Bra009031.1-P	nucleus
Bra010457.1-P
Bra010722.1-P
Bra011500.1-P
Bra011501.1-P	nucleus
Bra012909.1-P	nucleus
Bra013838.1-P
Bra013899.1-P
Bra015169.1-P
Bra017628.1-P
Bra017629.1-P	nucleus
Bra017840.1-P	nucleus
Bra018036.1-P
Bra019155.1-P
Bra022520.1-P
Bra023783.1-P
Bra023896.1-P
Bra028145.1-P
Bra028703.1-P
Bra029917.1-P
Bra029992.1-P	nucleus
Bra030777.1-P
Bra032191.1-P
Bra033582.1-P
Bra034198.1-P	nucleus
Bra034200.1-P
Bra034380.1-P
Bra034611.1-P
Bra034612.1-P	nucleus
Bra034916.1-P
Bra037096.1-P
Bra039289.1-P
Bra040033.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50630.1	Bra030777.1-P	AT1G09430.1	20706207
AT3G50630.1	Bra000413.1-P	AT1G14620.1	20706207
AT3G50630.1	Bra004566.1-P	AT1G14620.1	20706207
AT3G50630.1	Bra039289.1-P	AT1G14620.1	20706207
AT3G50630.1	Bra032191.1-P	AT1G43700.1	20706207
AT3G50630.1	Bra034916.1-P	AT1G43700.1	20706207
AT3G50630.1	Bra023896.1-P	AT1G51650.1	20706207
AT3G50630.1	Bra037096.1-P	AT1G55890.1	20706207
AT3G50630.1	Bra004140.1-P	AT2G03820.1	20706207
AT3G50630.1	Bra040033.1-P	AT2G03820.1	20706207
AT3G50630.1	Bra015169.1-P	AT2G05830.1	20706207
AT3G50630.1	Bra034380.1-P	AT2G27970.1	20706207
AT3G50630.1	Bra018036.1-P	AT3G48750.1	10758489
AT3G50630.1	Bra029917.1-P	AT3G48750.1	10758489
AT3G50630.1	Bra018036.1-P	AT3G48750.1	11449057
AT3G50630.1	Bra029917.1-P	AT3G48750.1	11449057
AT3G50630.1	Bra018036.1-P	AT3G48750.1	20706207
AT3G50630.1	Bra029917.1-P	AT3G48750.1	20706207
AT3G50630.1	Bra018036.1-P	AT3G48750.1	21798944
AT3G50630.1	Bra029917.1-P	AT3G48750.1	21798944
AT3G50630.1	Bra018036.1-P	AT3G48750.1	9753775
AT3G50630.1	Bra029917.1-P	AT3G48750.1	9753775
AT3G50630.1	Bra012909.1-P	AT3G50070.1	20407024
AT3G50630.1	Bra029992.1-P	AT3G50070.1	20407024
AT3G50630.1	Bra023783.1-P	AT3G55760.1	20706207
AT3G50630.1	Bra007220.1-P	AT3G56150.1	20706207
AT3G50630.1	Bra022520.1-P	AT3G56150.1	20706207
AT3G50630.1	Bra003438.1-P	AT3G61140.1	20706207
AT3G50630.1	Bra007576.1-P	AT3G61140.1	20706207
AT3G50630.1	Bra034198.1-P	AT4G03270.1	20407024
AT3G50630.1	Bra000837.1-P	AT4G03280.1	20706207
AT3G50630.1	Bra034200.1-P	AT4G03280.1	20706207
AT3G50630.1	Bra013838.1-P	AT4G24820.1	20706207
AT3G50630.1	Bra010457.1-P	AT4G25550.1	20706207
AT3G50630.1	Bra013899.1-P	AT4G25550.1	20706207
AT3G50630.1	Bra019155.1-P	AT4G25550.1	20706207
AT3G50630.1	Bra011500.1-P	AT4G34150.1	20706207
AT3G50630.1	Bra017628.1-P	AT4G34150.1	20706207
AT3G50630.1	Bra034611.1-P	AT4G34150.1	20706207
AT3G50630.1	Bra011501.1-P	AT4G34160.1	20407024
AT3G50630.1	Bra017629.1-P	AT4G34160.1	20407024
AT3G50630.1	Bra034612.1-P	AT4G34160.1	20407024
AT3G50630.1	Bra017840.1-P	AT4G37630.1	20407024
AT3G50630.1	Bra017840.1-P	AT4G37630.1	20706207
AT3G50630.1	Bra010722.1-P	AT4G38900.1	20706207
AT3G50630.1	Bra033582.1-P	AT4G38900.1	20706207
AT3G50630.1	Bra028703.1-P	AT5G07310.1	20706207
AT3G50630.1	Bra009031.1-P	AT5G10440.1	20407024
AT3G50630.1	Bra009031.1-P	AT5G10440.1	20706207
AT3G50630.1	Bra028145.1-P	AT5G37720.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02078	Canola	nucleus	98.11	98.11
AT3G50630.1	Thale cress	nucleus	67.92	68.9
Bra036095.1-P	Field mustard	nucleus	50.0	64.24

Protein Annotations

MapMan:13.1.1.3.1	Gene3D:4.10.365.10	EnsemblPlantsGene:Bra012894	EnsemblPlants:Bra012894.1	EnsemblPlants:Bra012894.1-P	InterPro:CDI
GO:GO:0003674	GO:GO:0004860	GO:GO:0004861	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0006469	GO:GO:0007049	GO:GO:0007050	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0030234	GO:GO:0071901	UniProt:M4D8T4
PFAM:PF02234	PIRSF:PIRSF017811	PANTHER:PTHR10265	PANTHER:PTHR10265:SF39	UniParc:UPI0002540658	SEG:seg

Description

AT3G50630 (E=2e-063) KRP2, ICK2 | KRP2 (KIP-RELATED PROTEIN 2); cyclin-dependent protein kinase inhibitor/ kinase inhibitor/ protein binding

Coordinates

chrA03:+:21676692..21677580

Molecular Weight (calculated)

24460.3 Da

IEP (calculated)

4.817

GRAVY (calculated)

-0.982

Length

212 amino acids

Sequence
(BLAST)

001: MAGGNVSVRG RRRELDVSEE NEANTTPKRR KLEVDVESRI VFSPCVQSTS RGGTVARNSA GASETSVVIV RRRESPVDEQ CQIPSSVSCC SSNVSEEKTK
101: RRIEFVDLEE DDDGNLDQTV TSWIYDNFNN TRRDMQHEDS TAMEVQEVEC RRRLKMKKSR ETVKEAELED FFQAAEKDVR NNKMLECSWK YNFDFEKDEP
201: LGGRYEWVKL NP

Best Arabidopsis Sequence Match ( AT3G50630.1 )
(BLAST)

001: MAAVRRRERD VVEENGVTTT TVKRRKMEEE VDLVESRIIL SPCVQATNRG GIVARNSAGA SETSVVIVRR RDSPPVEEQC QIEEEDSSVS CCSTSEEKSK
101: RRIEFVDLEE NNGDDRETET SWIYDDLNKS EESMNMDSSS VAVEDVESRR RLRKSLHETV KEAELEDFFQ VAEKDLRNKL LECSMKYNFD FEKDEPLGGG
201: RYEWVKLNP

Arabidopsis Description

KRP2Cyclin-dependent kinase inhibitor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCR2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.