Factsheet for Bra026065.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003493.1-P
Bra026481.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G16330.1	Bra003493.1-P	AT3G62240.1	20706207
AT1G16330.1	Bra026481.1-P	AT5G23810.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33338	Canola	nucleus	90.91	78.77
CDY35083	Canola	cytosol, endoplasmic reticulum, nucleus	94.07	78.16
Bra016640.1-P	Field mustard	nucleus	85.57	66.11
AT1G16330.1	Thale cress	nucleus	83.0	64.81
VIT_19s0085g00690.t01	Wine grape	nucleus	48.42	40.56
Bra016460.1-P	Field mustard	nucleus	28.06	34.63
Bra002046.1-P	Field mustard	nucleus	26.88	34.61
KRH44849	Soybean	nucleus	50.59	34.55
Bra017726.1-P	Field mustard	nucleus	27.67	34.48
Bra025831.1-P	Field mustard	nucleus	27.87	34.39
Bra028741.1-P	Field mustard	nucleus	27.08	33.01
Bra037265.1-P	Field mustard	nucleus	26.28	32.52
Bra003727.1-P	Field mustard	nucleus	24.51	32.38
Bra005880.1-P	Field mustard	nucleus, plastid	26.09	31.88
Bra015762.1-P	Field mustard	nucleus	26.68	31.32
Bra024504.1-P	Field mustard	nucleus	25.89	31.26
Solyc07g066660.2.1	Tomato	nucleus	44.27	30.31
Bra011769.1-P	Field mustard	nucleus	25.3	29.91
Bra040753.1-P	Field mustard	nucleus, plastid	20.75	28.93
Bra032220.1-P	Field mustard	nucleus	19.76	28.01
Bra040793.1-P	Field mustard	nucleus	19.76	27.55
Bra033658.1-P	Field mustard	nucleus	19.37	27.53
Bra000822.1-P	Field mustard	nucleus	20.36	27.32
Bra040792.1-P	Field mustard	nucleus, plastid	18.58	25.82
Bra031463.1-P	Field mustard	nucleus	18.58	25.47
Bra003563.1-P	Field mustard	plastid	21.74	25.46
Bra040710.1-P	Field mustard	nucleus	18.58	25.34
Bra026756.1-P	Field mustard	plastid	20.36	25.18
Bra032202.1-P	Field mustard	plastid	20.95	25.12
Bra015671.1-P	Field mustard	plastid	18.77	24.61
Bra022173.1-P	Field mustard	nucleus, plastid	18.18	24.4
Bra008477.1-P	Field mustard	plastid	21.94	24.29
Bra023606.1-P	Field mustard	plastid	19.96	24.11
Bra008973.1-P	Field mustard	nucleus, plastid	20.75	24.03
Bra016654.1-P	Field mustard	nucleus, plastid	20.95	23.82
Bra026120.1-P	Field mustard	nucleus	20.95	22.75
Bra035186.1-P	Field mustard	plastid	20.55	22.51
Bra036544.1-P	Field mustard	nucleus	20.36	10.44

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.2	EnsemblPlantsGene:Bra026065	EnsemblPlants:Bra026065.1	EnsemblPlants:Bra026065.1-P	InterPro:Cyclin-like
InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom	InterPro:Cyclin_N	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	UniProt:M4EBA6	PFAM:PF00134	PFAM:PF02984	PIRSF:PIRSF001771	ScanProsite:PS00292
PANTHER:PTHR10177	PANTHER:PTHR10177:SF222	SMART:SM00385	SMART:SM01332	SUPFAM:SSF47954	UniParc:UPI000253F18F

Description

AT1G16330 (E=4e-185) CYCB3;1 | CYCB3;1 (cyclin b3;1); cyclin-dependent protein kinase

Coordinates

chrA06:-:6269715..6273857

Molecular Weight (calculated)

56837.7 Da

IEP (calculated)

10.190

GRAVY (calculated)

-0.425

Length

506 amino acids

Sequence
(BLAST)

001: MAFAKAPRLG KDDTLGNREK YTKVTRKALA DLSNLGGNTL RPALSGSSTI KLPSLKRTSL TDKNTKKDNV SSLDSKQLGQ GPASKVSNKV LPQISSARSF
101: TSKTRTSIGS IPSDRTNQSK NNVRIARKSI KIQTSVKTSL QNRSPLKKPP VGRSKSQSIL SVPSPVEAAS ELSIPEQVET EGLKEDTHGE SSSDVKTDSA
201: TKVLDVTARP KSKRRKSFTS LLVTGSKKND ETAQQEKLPN IDDESNQLEV AEYVDDIYQF YWTAEALNPA LGYYLSTQTK VSPVTRGILI NWLIEVHSKF
301: DLMHETLYLT MNLLDRYLSQ VPVQKNEMQL IGLTALLLAS KYEDYWHPRI KDLISISAET YTREQILGME RIMLKQLKFR LNEATPYVFM LRFLKAAQSN
401: KKLQQLSFYL IELCLVEYEA LKFKPSLLCA SAIYVARCTL HMTPVWTALL NSHTHYNVSQ MKDCSDMILK FHKAAKTGKL RVTYDKYMKS ELSNVAVLKP
501: LDKLPL

Best Arabidopsis Sequence Match ( AT1G16330.1 )
(BLAST)

001: MAFAKAPRLS RDDILGNRVS TRSFKIFSDN QKTDPASTIG TSQKKTRIPL RRKSVTISNG LGATSNTNNM KKENSRITGK GKSSIENWEE YTKVTRKALA
101: DLSNLGGNTL RIPTLCGSST MKWKGVKMAN PKRVSVGPTR ANNISVKKST KENVSKRTTE LGNNNLYKTG QKFIKNKTLS LGSTAGGTRK SLPTLKRTSL
201: TDKSLKKFNV SGLNSKQLGQ GLASKASNQA VPQLSSAGTY TWKTRTSVGS IQSDGNKQSK NNVRFVRKSI KIQTTVKTSL QNRSSLKKPP VGRSKSRSIS
301: SIPSSAVAST LSLPEKVETK CLEEDTQGES SSSGNKDPTT KVLDVTAKPK SKRRKSFTSL LVNGSKFDEK NGETTEPEKL PSIDDESNQL EVAEYVDDIY
401: QFYWTAEALN PALGHYLSAH AEVSPVTRGI LINWLIEVHF KFDLMHETLY LTMDLLDRYL SQVPIHKNEM QLIGLTALLL ASKYEDYWHP RIKDLISISA
501: ESYTREQILG MERSMLKQLK FRLNAPTPYV FMLRFLKAAQ SNKKLEQLAF YLIELCLVEY EALKYKPSLL CASAIYVARC TLHMTPVWTS LLNNHTHYNV
601: SQMKDCSDMI LRFHKAAKTG NLRVTYEKYI NPDRSNVAVL KPLDKLPL

Arabidopsis Description

CYCB3;1CYCB3 [Source:UniProtKB/TrEMBL;Acc:A0A178W969]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.