Factsheet for Bra015671.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 5
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87520	Canola	nucleus	99.48	99.48
AT1G77390.1	Thale cress	plastid	80.31	70.14
Bra022173.1-P	Field mustard	nucleus, plastid	67.62	69.23
Os05t0237100-01	Rice	extracellular	27.98	54.82
Bra023606.1-P	Field mustard	plastid	54.15	49.88
Bra032202.1-P	Field mustard	plastid	52.59	48.1
Zm00001d032128_P001	Maize	cytosol	18.39	44.94
TraesCS1B01G151800.3	Wheat	nucleus	40.93	44.51
VIT_18s0001g02060.t01	Wine grape	plastid	56.48	44.04
KRH64625	Soybean	plastid	54.66	43.59
KRH53279	Soybean	plastid	54.15	43.54
Solyc11g005090.1.1	Tomato	plastid	54.4	42.86
PGSC0003DMT400015424	Potato	plastid	52.07	42.58
Os12t0298950-00	Rice	nucleus	47.93	41.39
KRH17986	Soybean	plastid	53.63	41.15
KRH16410	Soybean	plastid	53.63	41.07
Bra033658.1-P	Field mustard	nucleus	37.82	41.01
Bra032220.1-P	Field mustard	nucleus	37.31	40.34
Bra000822.1-P	Field mustard	nucleus	39.12	40.05
Os01t0233100-00	Rice	nucleus, plastid	50.78	39.92
Bra031463.1-P	Field mustard	nucleus	38.08	39.84
Bra040792.1-P	Field mustard	nucleus, plastid	37.56	39.84
Bra040710.1-P	Field mustard	nucleus	37.56	39.08
Bra026756.1-P	Field mustard	plastid	41.19	38.88
GSMUA_Achr5P06960_001	Banana	nucleus, plastid	50.26	38.8
Os01t0233500-01	Rice	nucleus, plastid	51.04	38.78
Bra040753.1-P	Field mustard	nucleus, plastid	36.27	38.57
Bra040793.1-P	Field mustard	nucleus	36.27	38.57
GSMUA_Achr2P19220_001	Banana	nucleus, plastid	50.0	38.45
TraesCS3D01G164600.1	Wheat	plastid	50.78	38.43
TraesCS3A01G157000.1	Wheat	plastid	51.04	38.4
TraesCS3B01G183400.1	Wheat	plastid	50.52	38.24
Zm00001d040381_P001	Maize	plastid	52.33	37.9
KXG21616	Sorghum	nucleus, plastid	46.63	37.58
TraesCS1D01G134100.2	Wheat	nucleus, plastid	46.37	37.53
Zm00001d021353_P002	Maize	mitochondrion, nucleus	19.17	37.0
Bra003563.1-P	Field mustard	plastid	39.38	35.19
Bra016654.1-P	Field mustard	nucleus, plastid	40.16	34.83
Bra008973.1-P	Field mustard	nucleus, plastid	39.12	34.55
Zm00001d009011_P001	Maize	nucleus, plastid	44.56	33.73
Bra008477.1-P	Field mustard	plastid	39.9	33.7
Bra026120.1-P	Field mustard	nucleus	40.16	33.26
Bra035186.1-P	Field mustard	plastid	39.38	32.9
TraesCS1A01G138300.1	Wheat	nucleus, plastid	43.26	31.81
Bra017726.1-P	Field mustard	nucleus	32.12	30.54
Zm00001d010404_P001	Maize	nucleus	37.82	30.1
Bra024504.1-P	Field mustard	nucleus	30.57	28.16
Bra002046.1-P	Field mustard	nucleus	28.5	27.99
Bra016460.1-P	Field mustard	nucleus	29.53	27.8
Bra003727.1-P	Field mustard	nucleus	27.46	27.68
Bra037265.1-P	Field mustard	nucleus	29.27	27.63
Bra011769.1-P	Field mustard	nucleus	30.57	27.57
Bra015762.1-P	Field mustard	nucleus	30.57	27.38
Bra025831.1-P	Field mustard	nucleus	28.76	27.07
Bra005880.1-P	Field mustard	nucleus, plastid	28.76	26.81
Bra028741.1-P	Field mustard	nucleus	28.76	26.75
Bra026065.1-P	Field mustard	nucleus	24.61	18.77
Bra036544.1-P	Field mustard	nucleus	39.9	15.6
Bra016640.1-P	Field mustard	nucleus	25.39	14.96

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.1	EnsemblPlantsGene:Bra015671	EnsemblPlants:Bra015671.1	EnsemblPlants:Bra015671.1-P	InterPro:Cyclin-like
InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom	InterPro:Cyclin_N	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	UniProt:M4DGP6	PFAM:PF00134	PFAM:PF02984	PIRSF:PIRSF001771	ScanProsite:PS00292
PANTHER:PTHR10177	PANTHER:PTHR10177:SF239	SMART:SM00385	SMART:SM01332	SUPFAM:SSF47954	UniParc:UPI0002541AF9
SEG:seg	:	:	:	:	:

Description

AT1G77390 (E=2e-134) CYCA1;2, CYCA1 | CYCA1;2 (CYCLIN A1;2); cyclin-dependent protein kinase regulator

Coordinates

chrA07:-:21436056..21437955

Molecular Weight (calculated)

43400.9 Da

IEP (calculated)

7.633

GRAVY (calculated)

-0.288

Length

386 amino acids

Sequence
(BLAST)

001: MSSSSSSRNQ PKENPLSRPS VAKTRPPLGD VVNRRNPLGD ITNQKTGSRI SAPSSTLVHC SNKIGKSKKA SKPPKAIAKS NLLVPYEDIE LNQGSDLGND
101: DDDEVVDDID SNLVDPQLCG AFACDIYEHL RSSEVKKRPA FDYMERVQSN INASMRTILI DWLVEVAEEY RLLPETLYLA VHCLDRYLSG NVITKQNLQL
201: LGVSCMMIAA KYEEVCVPQV ESFCYITDNT YSRNELLEME SSVLNYLKFE LTTPTAKCFL RRFVRAAQGR KEVSSLLFES LASYFSELSL LDYAMLRYAP
301: SLVAASAVFL AQYILHPSTK PWSSTLEHYT SYRAKHLEAC VKNLLQLCHE SPSADVVAVR KKYSQDKYKF AAKKFCPTSL PQELFL

Best Arabidopsis Sequence Match ( AT1G77390.1 )
(BLAST)

001: MSSSSRNLSQ ENPIPRPNLA KTRTSLRDVG NRRAPLGDIT NQKNGSRNPS PSSTLVNCSN KIGQSKKAPK PALSRNWNLG ILDSGLPPKP NAKSNIIVPY
101: EDTELLQSDD SLLCSSPALS LDASPTQSDP SISTHDSLTN HVVDYMVEST TDDGNDDDDD EIVNIDSDLM DPQLCASFAC DIYEHLRVSE VNKRPALDYM
201: ERTQSSINAS MRSILIDWLV EVAEEYRLSP ETLYLAVNYV DRYLTGNAIN KQNLQLLGVT CMMIAAKYEE VCVPQVEDFC YITDNTYLRN ELLEMESSVL
301: NYLKFELTTP TAKCFLRRFL RAAQGRKEVP SLLSECLACY LTELSLLDYA MLRYAPSLVA ASAVFLAQYT LHPSRKPWNA TLEHYTSYRA KHMEACVKNL
401: LQLCNEKLSS DVVAIRKKYS QHKYKFAAKK LCPTSLPQEL FL

Arabidopsis Description

CYCA1-2TAM [Source:UniProtKB/TrEMBL;Acc:A0A178WDV8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.