Factsheet for Bra036544.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19803	Canola	golgi, nucleus, plasma membrane, plastid	98.48	98.28
CDX87087	Canola	plastid	40.12	94.96
AT5G25380.4	Thale cress	plastid	33.03	73.59
Bra008973.1-P	Field mustard	nucleus, plastid	26.95	60.87
VIT_04s0008g04260.t01	Wine grape	nucleus, plastid	21.58	53.12
Bra000822.1-P	Field mustard	nucleus	20.16	52.79
Bra031463.1-P	Field mustard	nucleus	19.35	51.76
KRH16044	Soybean	nucleus	22.49	48.16
Bra026756.1-P	Field mustard	plastid	19.86	47.92
Solyc06g065680.2.1	Tomato	nucleus, plastid	23.0	47.79
KRH52524	Soybean	nucleus	22.49	47.33
KRH05060	Soybean	nucleus	21.88	47.06
KRH61850	Soybean	nucleus	23.0	46.52
Bra003563.1-P	Field mustard	plastid	20.26	46.3
Bra016654.1-P	Field mustard	nucleus, plastid	20.16	44.72
PGSC0003DMT400067117	Potato	plastid	22.39	44.47
Bra008477.1-P	Field mustard	plastid	20.57	44.42
Bra033658.1-P	Field mustard	nucleus	15.7	43.54
Bra035186.1-P	Field mustard	plastid	20.26	43.29
Bra026120.1-P	Field mustard	nucleus	20.36	43.13
Bra040792.1-P	Field mustard	nucleus, plastid	15.6	42.31
Bra040710.1-P	Field mustard	nucleus	15.6	41.51
Bra032220.1-P	Field mustard	nucleus	14.99	41.46
Bra040793.1-P	Field mustard	nucleus	14.79	40.22
Bra015671.1-P	Field mustard	plastid	15.6	39.9
Bra040753.1-P	Field mustard	nucleus, plastid	14.59	39.67
Bra023606.1-P	Field mustard	plastid	16.11	37.95
Bra022173.1-P	Field mustard	nucleus, plastid	13.78	36.07
Bra032202.1-P	Field mustard	plastid	15.4	36.02
Bra002046.1-P	Field mustard	nucleus	11.45	28.75
Bra017726.1-P	Field mustard	nucleus	11.55	28.08
Bra005880.1-P	Field mustard	nucleus, plastid	11.65	27.78
Bra024504.1-P	Field mustard	nucleus	11.75	27.68
Bra003727.1-P	Field mustard	nucleus	10.74	27.68
Bra016460.1-P	Field mustard	nucleus	11.45	27.56
Bra028741.1-P	Field mustard	nucleus	11.55	27.47
Bra025831.1-P	Field mustard	nucleus	11.25	27.07
Bra037265.1-P	Field mustard	nucleus	11.14	26.89
Bra015762.1-P	Field mustard	nucleus	11.65	26.68
Bra011769.1-P	Field mustard	nucleus	11.35	26.17
Bra026065.1-P	Field mustard	nucleus	10.44	20.36
Bra016640.1-P	Field mustard	nucleus	10.54	15.88

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.1	MapMan:24.2.3.3.2	EnsemblPlantsGene:Bra036544	EnsemblPlants:Bra036544.1	EnsemblPlants:Bra036544.1-P
InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom	InterPro:Cyclin_N	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	UniProt:M4F635	PFAM:PF00134
PFAM:PF00860	PFAM:PF02984	ScanProsite:PS00292	PANTHER:PTHR11119	PANTHER:PTHR11119:SF52	SMART:SM00385
SMART:SM01332	SUPFAM:SSF47954	TMHMM:TMhelix	UniParc:UPI0002541C8B	InterPro:Xant/urac/vitC	SEG:seg

Description

AT1G65550 (E=2e-209) | xanthine/uracil permease family protein

Coordinates

chrA09:-:1679960..1686462

Molecular Weight (calculated)

109097.0 Da

IEP (calculated)

9.164

GRAVY (calculated)

0.002

Length

987 amino acids

Sequence
(BLAST)

001: MANGGGNGGG GNNNNSGGGN GGGGNNNSGG GNGGGGNNNN RGGGNGGGGN SNNSGGGNRT VELQPHPVKE QLPGIQYCVN SPPPWYEALV LGFQHYLLSL
101: GITVLIPSLL VPHMGGGDAE KARVIQTMLF VSGLTTLFQS FFGTRLPVIA APSYAYIIPI TSIISSTRFA YYTDPFERFV ETLRSIQGAL IIAGCFQVLV
201: CFLGLWRNIA RFLSPLSIAP LTTFAGLGLY QIGFPWLARC VEVGLPGLIL LVLVTQYLPR FLKMKVIWDG SRCDRYGMMM CIPLAWLLAL LLTSSGVYNH
301: KSQTTQISCR TDRNGLITNT PWIYLPYPFQ WGSPTFHFTD SFAMMAASFV TLFESTGLFY ASARYGSATP IPPSVISRGT GWLGVGVLLN GMLGGVSGIT
401: TSTENVGLLA MTKIGSRRVI QISAAFMIFF SIFGKFGAFF ASIPLPIMAS VYCIVLCFVC SAGISFLQFC NLNSFNTKFI LGFSFFMAIS IPQYFREYYN
501: GGWRSDHHSS WFVDVIRVIF MSHTTVAGMI AIVLDCTLSR ESDEAKKDCG LKWLGKPVES FFNYKTMNRG SSRQPKANKE TISTAKTRQG NVRVTRSRAK
601: ALGTSISPSK PVFKQQPKLK KRMASDDTRV CQHKRRAVLK DVTNTLACLD GNNVKASKSE QDVDAEKSKL AEDLSKIRMV ESATNSKDGD QKENGYDVTG
701: YLKPVDIDSS DQDPKFCSLY AVNMYDSFHV AELDQRPSTS YMVQVQRDIS PSMRGILIDW LVEVSEEYKL ASDTLYLAVN LIDRFLSNNY IEKRRLQLLG
801: VTCMLIASKY EEICAPRLEE FCFITDNTYT RLEVVAMETQ VLNFLHFRLS VPTTKTFLRR FIQAAQASDQ VLHTEMESMK SLANYLAELT LVEYSFLRFL
901: PSLIAASAVF LARWTLDQSK HPWNSTLQHY TRYETPALKN TVLAMEDLQL NTSGSILVAI RNKYNQEKFK RVATLTSPES VTTLFSR

Best Arabidopsis Sequence Match ( AT1G65550.1 )
(BLAST)

001: MTNGGGGNNG AANRTEELQP HPVKEQLPGI QYCVNSPPPW LEAVVLGFQH YLLSLGITVL IPSVLVPLMG GGYAEKVKVI QTLLFVSGLT TLFQSFFGTR
101: LPVIAVASYA YIIPITSIIY STRFTYYTDP FERFVRTMRS IQGALIITGC FQVLICILGV WRNIVRFLSP LSIAPLATFT GLGLYHIGFP LLARCVEVGL
201: PGLILLIFVT QYLPRFLKMK KGVMILDGSR CDRYGMILCI PLVWLFAQLL TSSGVYDHKS HTTQTSCRTD RTGLITNTPW IYIPYPFQWG SPTFDITDSF
301: AMMAASFVTL FESTGLFYAS ARYGSATPIP PSVVSRGTCW LGVGVLLNGM LGGITGITTS TENVGLLAMT KIGSRRVIQI SAAFMIFFSI FGKFGAFFAS
401: IPLPIMASLY CIVLCFVSSV GLSYLQFCNL NSFNIKFILG FSFFMAISIP QYFREYYNGG WRSDHHSNWL EDMIRVIFMS HTTVAAIIAI VLDCTLCRDS
501: DEAKKDCGMK WWDKFRLYNL DVRNDEFYGL PCRLNKFFPS H

Arabidopsis Description

NAT10Putative nucleobase-ascorbate transporter 10 [Source:UniProtKB/Swiss-Prot;Acc:O04472]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.