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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 4
  • nucleus 4
  • mitochondrion 2
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr2P19220_001 Banana nucleus, plastid 80.8 80.48
Os05t0237100-01 Rice extracellular 28.2 71.57
Os12t0298950-00 Rice nucleus 59.2 66.22
Os01t0233500-01 Rice nucleus, plastid 66.0 64.96
Os01t0233100-00 Rice nucleus, plastid 63.6 64.77
TraesCS1B01G151800.3 Wheat nucleus 45.8 64.51
Zm00001d032128_P001 Maize cytosol 20.0 63.29
TraesCS3D01G164600.1 Wheat plastid 64.0 62.75
TraesCS3A01G157000.1 Wheat plastid 64.2 62.57
TraesCS3B01G183400.1 Wheat plastid 63.6 62.35
VIT_18s0001g02080.t01 Wine grape nucleus, plastid 46.0 62.16
Zm00001d040381_P001 Maize plastid 63.2 59.29
VIT_18s0001g02060.t01 Wine grape plastid 57.8 58.38
KRH53279 Soybean plastid 54.6 56.88
KRH64625 Soybean plastid 54.8 56.61
PGSC0003DMT400015424 Potato plastid 53.2 56.36
Solyc11g005090.1.1 Tomato plastid 55.2 56.33
AT1G44110.1 Thale cress plastid 51.6 56.09
Bra032202.1-P Field mustard plastid 47.2 55.92
CDY25649 Canola plastid 48.4 55.38
Zm00001d009011_P001 Maize nucleus, plastid 56.4 55.29
TraesCS1D01G134100.2 Wheat nucleus, plastid 52.4 54.93
Bra023606.1-P Field mustard plastid 45.6 54.42
CDX85466 Canola plastid 45.8 54.27
CDY65994 Canola plastid 48.0 54.18
CDY02719 Canola plastid 46.0 53.61
KRH17986 Soybean plastid 53.4 53.08
KRH16410 Soybean plastid 53.0 52.58
KXG21616 Sorghum nucleus, plastid 49.0 51.15
CDY41784 Canola plastid 34.6 50.88
CDY62408 Canola nucleus, plasma membrane, plastid 21.4 50.71
CDX87520 Canola nucleus 39.0 50.52
CDX88368 Canola plastid 38.2 50.26
Bra015671.1-P Field mustard plastid 38.8 50.26
GSMUA_Achr1P14000_001 Banana nucleus, plasma membrane, plastid 24.4 49.39
GSMUA_Achr2P21530_001 Banana cytosol, nucleus, plastid 28.0 48.95
Zm00001d021353_P002 Maize mitochondrion, nucleus 19.2 48.0
GSMUA_Achr10P... Banana nucleus 30.4 47.95
TraesCS1A01G138300.1 Wheat nucleus, plastid 50.0 47.62
AT1G77390.1 Thale cress plastid 41.4 46.83
GSMUA_Achr6P11130_001 Banana nucleus 34.4 43.99
CDX92090 Canola mitochondrion, nucleus 31.4 43.98
Bra022173.1-P Field mustard nucleus, plastid 32.8 43.5
GSMUA_Achr2P21520_001 Banana nucleus 30.6 42.5
Zm00001d010404_P001 Maize nucleus 40.0 41.24
GSMUA_Achr5P19270_001 Banana cytosol 15.2 35.02
GSMUA_AchrUn_... Banana nucleus 19.4 32.55
GSMUA_Achr3P25340_001 Banana nucleus 34.8 32.1
GSMUA_Achr3P24980_001 Banana nucleus 23.0 28.61
GSMUA_Achr4P10090_001 Banana nucleus 24.2 28.47
GSMUA_Achr11P... Banana nucleus 22.8 27.94
GSMUA_Achr5P19110_001 Banana nucleus 23.6 27.83
GSMUA_Achr8P23970_001 Banana nucleus 24.0 27.59
GSMUA_Achr8P13320_001 Banana nucleus 23.0 27.38
GSMUA_Achr10P... Banana nucleus 24.6 27.15
GSMUA_Achr7P21380_001 Banana nucleus 24.6 26.91
GSMUA_Achr11P... Banana endoplasmic reticulum, vacuole 24.0 17.96
Protein Annotations
Gene3D:1.10.472.10MapMan:13.1.1.1.1InterPro:Cyclin-likeInterPro:Cyclin-like_sfInterPro:Cyclin_C-domInterPro:Cyclin_N
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634EnsemblPlantsGene:GSMUA_Achr5G06960_001EnsemblPlants:GSMUA_Achr5P06960_001
EnsemblPlants:GSMUA_Achr5T06960_001UniProt:M0SWC5PFAM:PF00134PFAM:PF02984PIRSF:PIRSF001771ScanProsite:PS00292
PANTHER:PTHR10177PANTHER:PTHR10177:SF239SMART:SM00385SMART:SM01332SUPFAM:SSF47954UniParc:UPI00029565BB
SEG:seg:::::
Description
Cyclin-A1-1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G06960_001]
Coordinates
chr5:+:5049759..5054189
Molecular Weight (calculated)
54976.5 Da
IEP (calculated)
7.123
GRAVY (calculated)
-0.205
Length
500 amino acids
Sequence
(BLAST)
001: MNRRSSITSS TSAAASASAK RPAAMENAAK LATAMGEQAK KRVALGNISN QSNVARNPAR PLGAKSANVG ILGKAIPTSS ASTVKKGSLT GARDTRLSRS
101: SAVTSATIRP NTNKSSKRSS LPVNNGPKPA AAASLTSCII VESSNFSGDS VSLDETMSTC DLMKSPDVEY IDNGDSSVVA SLERRATENL HISEHVAAAG
201: STSNIDVPTP MEVDNVIDVD TNHNDPQFCT TLACDIYRHL RIAETKKIPS TNFMETIQKD INASMRSILI DWLVEVAEEY RLVPDTLYLT VNYIDRYLSG
301: NEINRQRLQL LGVACMLIAA KYEEICAPQV EEFCYITDNT YFKDEVLEME ADVLKYLKFE MTAPTSKCFL RRFIRAAQGS DEVPALQLEF LACYIAELSL
401: LEYNLLCYAP SIIAASAIFL ANFIMQPTKR PWNATLGHYT LYKPSDLSDC VKELHRLFCT SAGNNLPAIR EKYSQHKYKF VAKKYCPASI PLDYFQDEVH
Best Arabidopsis Sequence Match ( AT1G44110.1 )
(BLAST)
001: MSNILQNRRS SFSSSTKSSL AKRQAPSSSE NSVKLMPAMT KKRAPLSNIT NQKIASRLQN SDSVHCSNKS AKLKIAPSVC VNASFSSNLQ QSIVPHKVAS
101: SPSKSDDGSV SMDETRSSSD SYKSPQVEYI ENDDVSAVVS IERKALSNLF ITPNSETIDN YCSRDVLSDM KKMDKNQIVN IDSNNGDPQL CATFACDIYK
201: HLRASEAKKR PDVDYMERVQ KDVNSSMRGI LVDWLIEVSE EYRLVPETLY LTVNYIDRYL SGNVISRQKL QLLGVACMMI AAKYEEICAP QVEEFCYITD
301: NTYLKDEVLD MESDVLNYLK FEMTAPTTKC FLRRFVRAAH GVHEAPLMQL ECMANYIAEL SLLEYTMLSH SPSLVAASAI FLAKYILDPT RRPWNSTLQH
401: YTQYKAMELR GCVKDLQRLC STAHGSTLPA VREKYSQHKY KFVAKKFCPS VIPQEFFNNS
Arabidopsis Description
CYCA1-1CYCA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0H5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.