Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023606.1-P | Field mustard | plastid | 96.45 | 97.14 |
| CDY02719 | Canola | plastid | 95.73 | 94.17 |
| CDY65994 | Canola | plastid | 82.7 | 78.78 |
| CDY25649 | Canola | plastid | 81.52 | 78.72 |
| AT1G44110.1 | Thale cress | plastid | 76.78 | 70.43 |
| Os05t0237100-01 | Rice | extracellular | 29.15 | 62.44 |
| CDY41784 | Canola | plastid | 43.6 | 54.12 |
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 27.01 | 54.03 |
| KRH53279 | Soybean | plastid | 61.14 | 53.75 |
| KRH64625 | Soybean | plastid | 61.61 | 53.72 |
| CDX88368 | Canola | plastid | 48.34 | 53.68 |
| CDX87520 | Canola | nucleus | 49.05 | 53.63 |
| TraesCS1B01G151800.3 | Wheat | nucleus | 44.31 | 52.68 |
| VIT_18s0001g02060.t01 | Wine grape | plastid | 59.72 | 50.91 |
| Solyc11g005090.1.1 | Tomato | plastid | 57.35 | 49.39 |
| CDX92090 | Canola | mitochondrion, nucleus | 41.71 | 49.3 |
| PGSC0003DMT400015424 | Potato | plastid | 54.98 | 49.15 |
| KRH17986 | Soybean | plastid | 58.29 | 48.91 |
| KRH16410 | Soybean | plastid | 58.29 | 48.81 |
| Os12t0298950-00 | Rice | nucleus | 50.24 | 47.43 |
| Zm00001d032128_P001 | Maize | cytosol | 17.54 | 46.84 |
| CDY06752 | Canola | nucleus | 31.04 | 45.96 |
| GSMUA_Achr5P06960_001 | Banana | nucleus, plastid | 54.27 | 45.8 |
| Os01t0233100-00 | Rice | nucleus, plastid | 53.08 | 45.62 |
| Os01t0233500-01 | Rice | nucleus, plastid | 54.5 | 45.28 |
| GSMUA_Achr2P19220_001 | Banana | nucleus, plastid | 53.79 | 45.22 |
| TraesCS3B01G183400.1 | Wheat | plastid | 54.5 | 45.1 |
| TraesCS3D01G164600.1 | Wheat | plastid | 54.27 | 44.9 |
| TraesCS3A01G157000.1 | Wheat | plastid | 53.79 | 44.25 |
| Zm00001d040381_P001 | Maize | plastid | 55.45 | 43.9 |
| TraesCS1D01G134100.2 | Wheat | nucleus, plastid | 49.29 | 43.61 |
| CDY61993 | Canola | nucleus | 38.86 | 43.5 |
| CDY22369 | Canola | nucleus | 35.55 | 42.73 |
| CDY48212 | Canola | nucleus | 38.15 | 42.71 |
| CDY66770 | Canola | nucleus | 35.78 | 41.71 |
| KXG21616 | Sorghum | nucleus, plastid | 47.16 | 41.54 |
| CDY06757 | Canola | nucleus, plastid | 35.55 | 41.32 |
| CDY17091 | Canola | nucleus | 34.83 | 41.06 |
| CDY23653 | Canola | nucleus | 34.6 | 40.9 |
| CDY47596 | Canola | nucleus | 35.07 | 40.77 |
| CDY17039 | Canola | nucleus | 34.83 | 40.5 |
| CDX81722 | Canola | nucleus, plastid | 38.63 | 40.45 |
| CDY17037 | Canola | nucleus, plastid | 34.83 | 40.38 |
| CDY53304 | Canola | plastid | 39.1 | 40.34 |
| CDY31481 | Canola | nucleus | 20.38 | 39.63 |
| CDY47595 | Canola | nucleus, plastid | 34.83 | 39.62 |
| Zm00001d021353_P002 | Maize | mitochondrion, nucleus | 18.72 | 39.5 |
| Zm00001d009011_P001 | Maize | nucleus, plastid | 47.16 | 39.02 |
| CDX79389 | Canola | plastid | 39.81 | 38.8 |
| CDX67944 | Canola | plastid | 39.57 | 38.66 |
| CDY66415 | Canola | nucleus | 39.57 | 38.48 |
| CDY36574 | Canola | mitochondrion, nucleus | 39.34 | 38.07 |
| CDY39984 | Canola | plastid | 40.28 | 37.95 |
| CDX87087 | Canola | plastid | 37.44 | 37.89 |
| CDY38664 | Canola | nucleus, plastid | 40.52 | 37.58 |
| TraesCS1A01G138300.1 | Wheat | nucleus, plastid | 46.45 | 37.33 |
| CDX69768 | Canola | nucleus, plastid | 38.63 | 37.3 |
| CDX96836 | Canola | nucleus, plastid | 38.86 | 37.27 |
| CDY37592 | Canola | mitochondrion, plastid | 40.28 | 37.2 |
| CDX97090 | Canola | nucleus | 38.39 | 37.16 |
| CDX87305 | Canola | plastid | 39.81 | 36.36 |
| Zm00001d010404_P001 | Maize | nucleus | 37.68 | 32.78 |
| CDY62475 | Canola | nucleus | 25.59 | 30.77 |
| CDY69551 | Canola | nucleus | 25.83 | 30.7 |
| CDX72551 | Canola | nucleus | 28.91 | 30.42 |
| CDX85942 | Canola | nucleus | 29.38 | 30.39 |
| CDX96631 | Canola | nucleus | 29.38 | 30.24 |
| CDY33634 | Canola | nucleus | 29.15 | 30.15 |
| CDY67210 | Canola | nucleus | 28.67 | 29.8 |
| CDY07838 | Canola | nucleus | 29.38 | 29.67 |
| CDY29184 | Canola | nucleus | 29.38 | 29.59 |
| CDX88261 | Canola | nucleus | 29.86 | 29.3 |
| CDY29520 | Canola | nucleus | 28.44 | 29.27 |
| CDX87612 | Canola | nucleus | 29.86 | 29.23 |
| CDX68105 | Canola | nucleus | 27.25 | 29.11 |
| CDY30357 | Canola | nucleus | 27.96 | 28.85 |
| CDY26816 | Canola | nucleus | 27.73 | 28.75 |
| CDY11354 | Canola | plastid | 28.2 | 27.48 |
| CDX80988 | Canola | plastid | 27.73 | 27.34 |
| CDX69311 | Canola | nucleus | 26.54 | 26.73 |
| CDX75659 | Canola | nucleus | 26.78 | 26.4 |
| CDY33338 | Canola | nucleus | 24.88 | 17.98 |
| CDY14091 | Canola | plastid | 27.73 | 17.84 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 24.64 | 17.08 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 37.91 | 16.18 |
| CDY04980 | Canola | nucleus | 27.49 | 16.16 |
| CDX96819 | Canola | nucleus | 24.41 | 15.97 |
| CDX83953 | Canola | nucleus | 23.7 | 15.27 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.1 | GO:A0A078D857 | EnsemblPlants:CDX85466 | ProteinID:CDX85466 | ProteinID:CDX85466.1 |
| InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00143164001 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF239 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI0004EDB1AA | SEG:seg | : | : | : | : |
Description
BnaA02g03470D
Coordinates
chrLK031842:-:232204..234189
Molecular Weight (calculated)
47655.0 Da
IEP (calculated)
7.933
GRAVY (calculated)
-0.372
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKTTNQNRR PSFTSSTESS MRKRHGPSSS SSSVKPISNT AVMVAKKRAP LGNITNQRKD SRIFPNSSSA DSAHKSAKLK LAAPTQPVCV NACETKSTCE
101: EEVVPIERKA FSNLHITPSS DTTTNVMSET ENKEEKFMNI DNKDDADPQL CATFACDIYN HLRAAEAKKQ PAVDYMETVQ KDVNSTMRGI LVDWLVEVSE
201: EYRLVPETLY LTVNYIDRYL SGNVISRQKL QLLGVACMMI AAKYEEVCAP QVEEFCYITD NTYLKDEVLD MESAVLNYLK FEMSAPTVKC FLRRFSRAAQ
301: GVHEAPCMQL ECMASYIAEL SLLEYTMLSH PPSLVAASAI FLAKYTLDPT RRPWNSTLRH YTQYEAMELR GCVMDLQRLC SNAHVSTLPA VRDKYSQHKY
401: KFVAKKFCPS IIPPDFFKNS LY
101: EEVVPIERKA FSNLHITPSS DTTTNVMSET ENKEEKFMNI DNKDDADPQL CATFACDIYN HLRAAEAKKQ PAVDYMETVQ KDVNSTMRGI LVDWLVEVSE
201: EYRLVPETLY LTVNYIDRYL SGNVISRQKL QLLGVACMMI AAKYEEVCAP QVEEFCYITD NTYLKDEVLD MESAVLNYLK FEMSAPTVKC FLRRFSRAAQ
301: GVHEAPCMQL ECMASYIAEL SLLEYTMLSH PPSLVAASAI FLAKYTLDPT RRPWNSTLRH YTQYEAMELR GCVMDLQRLC SNAHVSTLPA VRDKYSQHKY
401: KFVAKKFCPS IIPPDFFKNS LY
001: MSNILQNRRS SFSSSTKSSL AKRQAPSSSE NSVKLMPAMT KKRAPLSNIT NQKIASRLQN SDSVHCSNKS AKLKIAPSVC VNASFSSNLQ QSIVPHKVAS
101: SPSKSDDGSV SMDETRSSSD SYKSPQVEYI ENDDVSAVVS IERKALSNLF ITPNSETIDN YCSRDVLSDM KKMDKNQIVN IDSNNGDPQL CATFACDIYK
201: HLRASEAKKR PDVDYMERVQ KDVNSSMRGI LVDWLIEVSE EYRLVPETLY LTVNYIDRYL SGNVISRQKL QLLGVACMMI AAKYEEICAP QVEEFCYITD
301: NTYLKDEVLD MESDVLNYLK FEMTAPTTKC FLRRFVRAAH GVHEAPLMQL ECMANYIAEL SLLEYTMLSH SPSLVAASAI FLAKYILDPT RRPWNSTLQH
401: YTQYKAMELR GCVKDLQRLC STAHGSTLPA VREKYSQHKY KFVAKKFCPS VIPQEFFNNS
101: SPSKSDDGSV SMDETRSSSD SYKSPQVEYI ENDDVSAVVS IERKALSNLF ITPNSETIDN YCSRDVLSDM KKMDKNQIVN IDSNNGDPQL CATFACDIYK
201: HLRASEAKKR PDVDYMERVQ KDVNSSMRGI LVDWLIEVSE EYRLVPETLY LTVNYIDRYL SGNVISRQKL QLLGVACMMI AAKYEEICAP QVEEFCYITD
301: NTYLKDEVLD MESDVLNYLK FEMTAPTTKC FLRRFVRAAH GVHEAPLMQL ECMANYIAEL SLLEYTMLSH SPSLVAASAI FLAKYILDPT RRPWNSTLQH
401: YTQYKAMELR GCVKDLQRLC STAHGSTLPA VREKYSQHKY KFVAKKFCPS VIPQEFFNNS
Arabidopsis Description
CYCA1-1CYCA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0H5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.