Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 5
- mitochondrion 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra035186.1-P | Field mustard | plastid | 99.13 | 99.13 |
CDY39984 | Canola | plastid | 90.48 | 93.3 |
CDY38664 | Canola | nucleus, plastid | 81.39 | 82.64 |
CDX67944 | Canola | plastid | 77.06 | 82.41 |
CDY37592 | Canola | mitochondrion, plastid | 80.95 | 81.84 |
CDX79389 | Canola | plastid | 75.32 | 80.37 |
AT1G80370.1 | Thale cress | plastid | 78.14 | 78.31 |
CDY48212 | Canola | nucleus | 59.96 | 73.47 |
CDY61993 | Canola | nucleus | 59.52 | 72.94 |
CDY66415 | Canola | nucleus | 64.94 | 69.12 |
CDY53304 | Canola | plastid | 60.82 | 68.7 |
CDY36574 | Canola | mitochondrion, nucleus | 64.72 | 68.58 |
CDX81722 | Canola | nucleus, plastid | 59.74 | 68.49 |
CDX96836 | Canola | nucleus, plastid | 64.07 | 67.27 |
GSMUA_Achr1P14000_001 | Banana | nucleus, plasma membrane, plastid | 33.33 | 62.35 |
VIT_09s0002g05240.t01 | Wine grape | nucleus | 56.06 | 52.86 |
KRH47513 | Soybean | nucleus | 51.95 | 50.42 |
KRH44391 | Soybean | nucleus | 49.78 | 48.83 |
CDY06752 | Canola | nucleus | 29.65 | 48.07 |
PGSC0003DMT400006576 | Potato | nucleus | 47.4 | 47.3 |
CDX87087 | Canola | plastid | 42.64 | 47.24 |
Solyc03g120440.1.1 | Tomato | nucleus, plastid | 46.54 | 46.94 |
CDX97090 | Canola | nucleus | 42.86 | 45.41 |
CDY22369 | Canola | nucleus | 33.98 | 44.73 |
CDX69768 | Canola | nucleus, plastid | 42.21 | 44.62 |
Os12t0502300-01 | Rice | nucleus, plastid | 46.97 | 44.29 |
OQU77084 | Sorghum | nucleus | 45.67 | 43.24 |
CDY17091 | Canola | nucleus | 32.47 | 41.9 |
CDY17037 | Canola | nucleus, plastid | 32.9 | 41.76 |
TraesCS5D01G121100.2 | Wheat | plastid | 45.45 | 41.34 |
TraesCSU01G054300.1 | Wheat | nucleus | 44.81 | 41.32 |
CDY47595 | Canola | nucleus, plastid | 33.12 | 41.24 |
TraesCS5B01G114300.2 | Wheat | plastid | 45.24 | 41.22 |
Zm00001d014756_P006 | Maize | nucleus, plastid | 46.32 | 41.07 |
CDX88368 | Canola | plastid | 33.77 | 41.05 |
TraesCS3A01G523600.1 | Wheat | plastid | 45.02 | 41.03 |
CDY66770 | Canola | nucleus | 32.03 | 40.88 |
TraesCS3D01G529100.1 | Wheat | plastid | 44.59 | 40.79 |
TraesCS5A01G108500.2 | Wheat | plastid | 44.81 | 40.75 |
CDY23653 | Canola | nucleus | 31.39 | 40.62 |
GSMUA_Achr3P25340_001 | Banana | nucleus | 47.4 | 40.41 |
KXG23504 | Sorghum | mitochondrion, nucleus | 42.21 | 40.37 |
HORVU3Hr1G114440.21 | Barley | nucleus, plastid | 44.16 | 40.24 |
CDY47596 | Canola | nucleus | 31.6 | 40.22 |
CDY17039 | Canola | nucleus | 31.39 | 39.94 |
CDY06757 | Canola | nucleus, plastid | 31.39 | 39.94 |
CDX87520 | Canola | nucleus | 33.33 | 39.9 |
CDX85466 | Canola | plastid | 36.36 | 39.81 |
CDY62408 | Canola | nucleus, plasma membrane, plastid | 18.18 | 39.81 |
Zm00001d023732_P002 | Maize | mitochondrion, nucleus, plastid | 41.56 | 39.59 |
CDY02719 | Canola | plastid | 35.93 | 38.69 |
CDY41784 | Canola | plastid | 28.36 | 38.53 |
CDY65994 | Canola | plastid | 35.71 | 37.25 |
CDY25649 | Canola | plastid | 34.85 | 36.84 |
CDY31481 | Canola | nucleus | 16.88 | 35.94 |
CDX92090 | Canola | mitochondrion, nucleus | 27.71 | 35.85 |
CDX72551 | Canola | nucleus | 25.54 | 29.43 |
CDY67210 | Canola | nucleus | 25.32 | 28.82 |
CDX85942 | Canola | nucleus | 25.32 | 28.68 |
CDY33634 | Canola | nucleus | 25.32 | 28.68 |
CDX96631 | Canola | nucleus | 25.32 | 28.54 |
CDY62475 | Canola | nucleus | 21.43 | 28.21 |
CDY69551 | Canola | nucleus | 21.64 | 28.17 |
CDY30357 | Canola | nucleus | 24.24 | 27.38 |
CDY26816 | Canola | nucleus | 24.03 | 27.27 |
CDY29184 | Canola | nucleus | 24.46 | 26.97 |
CDX68105 | Canola | nucleus | 22.94 | 26.84 |
CDY29520 | Canola | nucleus | 23.81 | 26.83 |
CDX88261 | Canola | nucleus | 24.89 | 26.74 |
CDX87612 | Canola | nucleus | 24.89 | 26.68 |
CDY07838 | Canola | nucleus | 24.03 | 26.55 |
CDX80988 | Canola | plastid | 23.81 | 25.7 |
CDY11354 | Canola | plastid | 23.81 | 25.4 |
CDX69311 | Canola | nucleus | 22.51 | 24.82 |
CDX75659 | Canola | nucleus | 22.29 | 24.07 |
CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 43.72 | 20.42 |
CDY33338 | Canola | nucleus | 24.24 | 19.18 |
CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 23.81 | 18.06 |
CDY14091 | Canola | plastid | 24.03 | 16.92 |
CDX96819 | Canola | nucleus | 23.59 | 16.9 |
CDX83953 | Canola | nucleus | 22.51 | 15.88 |
CDY04980 | Canola | nucleus | 24.24 | 15.6 |
Protein Annotations
Gene3D:1.10.472.10 | MapMan:13.1.1.1.1 | GO:A0A078DDK2 | EnsemblPlants:CDX87305 | ProteinID:CDX87305 | ProteinID:CDX87305.1 |
InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00146269001 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
PANTHER:PTHR10177 | PANTHER:PTHR10177:SF346 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0004EE99D9 |
SEG:seg | : | : | : | : | : |
Description
BnaA07g35680D
Coordinates
chrLK031850:+:93652..95847
Molecular Weight (calculated)
51819.4 Da
IEP (calculated)
9.304
GRAVY (calculated)
-0.269
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEIAVSGNT VPLHARPVTR ALASALRASK LLITSSSPNQ GRVLRANSKR RALDDDKKNA SPPKKKKKRA LLKDITNVTS HNNSYTTSCF SAAKLQVQIK
101: KGRACSSKVA SSSATSQVTD DVKLQVVSDS EGVSLSGCTG TNEASSSSKP SSRLPPRPLG RLTSTVERSC VGGSSTVASI PKFIDIDSDV KDPLLCSLYA
201: PDIHYNLRVS ELKRRPCPDC MGRTQRDVTQ TMRGILVDWL VEVSEEYTLA SDTLYLTVYL IDWFLHGNCM ERQRLQLLGI TCMLIASKYE EIYAPRIEEF
301: CFITDNTYTR DEVLEMESQV LKHFSFQIYT PTSKTFLRRF LRAAQPSHLM MPSVEMEFLA NYLTELTLIE CQFLKYLPSV IAASAVFLAK WTMNQSSHPW
401: NATLEHYTTY KASDLKECVQ ALQDLQLNTK GCPLNSIRIK YRQDKFKCVA VFTSPKVPER LF
101: KGRACSSKVA SSSATSQVTD DVKLQVVSDS EGVSLSGCTG TNEASSSSKP SSRLPPRPLG RLTSTVERSC VGGSSTVASI PKFIDIDSDV KDPLLCSLYA
201: PDIHYNLRVS ELKRRPCPDC MGRTQRDVTQ TMRGILVDWL VEVSEEYTLA SDTLYLTVYL IDWFLHGNCM ERQRLQLLGI TCMLIASKYE EIYAPRIEEF
301: CFITDNTYTR DEVLEMESQV LKHFSFQIYT PTSKTFLRRF LRAAQPSHLM MPSVEMEFLA NYLTELTLIE CQFLKYLPSV IAASAVFLAK WTMNQSSHPW
401: NATLEHYTTY KASDLKECVQ ALQDLQLNTK GCPLNSIRIK YRQDKFKCVA VFTSPKVPER LF
001: MGKENAVSRP FTRSLASALR ASEVTSTTQN QQRVNTKRPA LEDTRATGPN KRKKRAVLGE ITNVNSNTAI LEAKNSKQIK KGRGHGLAST SQLATSVTSE
101: VTDLQSRTDA KVEVASNTAG NLSVSKGTDN TADNCIEIWN SRLPPRPLGR SASTAEKSAV IGSSTVPDIP KFVDIDSDDK DPLLCCLYAP EIHYNLRVSE
201: LKRRPLPDFM ERIQKDVTQS MRGILVDWLV EVSEEYTLAS DTLYLTVYLI DWFLHGNYVQ RQQLQLLGIT CMLIASKYEE ISAPRIEEFC FITDNTYTRD
301: QVLEMENQVL KHFSFQIYTP TPKTFLRRFL RAAQASRLSP SLEVEFLASY LTELTLIDYH FLKFLPSVVA ASAVFLAKWT MDQSNHPWNP TLEHYTTYKA
401: SDLKASVHAL QDLQLNTKGC PLSAIRMKYR QEKYKSVAVL TSPKLLDTLF
101: VTDLQSRTDA KVEVASNTAG NLSVSKGTDN TADNCIEIWN SRLPPRPLGR SASTAEKSAV IGSSTVPDIP KFVDIDSDDK DPLLCCLYAP EIHYNLRVSE
201: LKRRPLPDFM ERIQKDVTQS MRGILVDWLV EVSEEYTLAS DTLYLTVYLI DWFLHGNYVQ RQQLQLLGIT CMLIASKYEE ISAPRIEEFC FITDNTYTRD
301: QVLEMENQVL KHFSFQIYTP TPKTFLRRFL RAAQASRLSP SLEVEFLASY LTELTLIDYH FLKFLPSVVA ASAVFLAKWT MDQSNHPWNP TLEHYTTYKA
401: SDLKASVHAL QDLQLNTKGC PLSAIRMKYR QEKYKSVAVL TSPKLLDTLF
Arabidopsis Description
CYCA2-3CYCA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WNJ4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.