Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 3
  • plastid 5
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035186.1-P Field mustard plastid 99.13 99.13
CDY39984 Canola plastid 90.48 93.3
CDY38664 Canola nucleus, plastid 81.39 82.64
CDX67944 Canola plastid 77.06 82.41
CDY37592 Canola mitochondrion, plastid 80.95 81.84
CDX79389 Canola plastid 75.32 80.37
AT1G80370.1 Thale cress plastid 78.14 78.31
CDY48212 Canola nucleus 59.96 73.47
CDY61993 Canola nucleus 59.52 72.94
CDY66415 Canola nucleus 64.94 69.12
CDY53304 Canola plastid 60.82 68.7
CDY36574 Canola mitochondrion, nucleus 64.72 68.58
CDX81722 Canola nucleus, plastid 59.74 68.49
CDX96836 Canola nucleus, plastid 64.07 67.27
GSMUA_Achr1P14000_001 Banana nucleus, plasma membrane, plastid 33.33 62.35
VIT_09s0002g05240.t01 Wine grape nucleus 56.06 52.86
KRH47513 Soybean nucleus 51.95 50.42
KRH44391 Soybean nucleus 49.78 48.83
CDY06752 Canola nucleus 29.65 48.07
PGSC0003DMT400006576 Potato nucleus 47.4 47.3
CDX87087 Canola plastid 42.64 47.24
Solyc03g120440.1.1 Tomato nucleus, plastid 46.54 46.94
CDX97090 Canola nucleus 42.86 45.41
CDY22369 Canola nucleus 33.98 44.73
CDX69768 Canola nucleus, plastid 42.21 44.62
Os12t0502300-01 Rice nucleus, plastid 46.97 44.29
OQU77084 Sorghum nucleus 45.67 43.24
CDY17091 Canola nucleus 32.47 41.9
CDY17037 Canola nucleus, plastid 32.9 41.76
TraesCS5D01G121100.2 Wheat plastid 45.45 41.34
TraesCSU01G054300.1 Wheat nucleus 44.81 41.32
CDY47595 Canola nucleus, plastid 33.12 41.24
TraesCS5B01G114300.2 Wheat plastid 45.24 41.22
Zm00001d014756_P006 Maize nucleus, plastid 46.32 41.07
CDX88368 Canola plastid 33.77 41.05
TraesCS3A01G523600.1 Wheat plastid 45.02 41.03
CDY66770 Canola nucleus 32.03 40.88
TraesCS3D01G529100.1 Wheat plastid 44.59 40.79
TraesCS5A01G108500.2 Wheat plastid 44.81 40.75
CDY23653 Canola nucleus 31.39 40.62
GSMUA_Achr3P25340_001 Banana nucleus 47.4 40.41
KXG23504 Sorghum mitochondrion, nucleus 42.21 40.37
HORVU3Hr1G114440.21 Barley nucleus, plastid 44.16 40.24
CDY47596 Canola nucleus 31.6 40.22
CDY17039 Canola nucleus 31.39 39.94
CDY06757 Canola nucleus, plastid 31.39 39.94
CDX87520 Canola nucleus 33.33 39.9
CDX85466 Canola plastid 36.36 39.81
CDY62408 Canola nucleus, plasma membrane, plastid 18.18 39.81
Zm00001d023732_P002 Maize mitochondrion, nucleus, plastid 41.56 39.59
CDY02719 Canola plastid 35.93 38.69
CDY41784 Canola plastid 28.36 38.53
CDY65994 Canola plastid 35.71 37.25
CDY25649 Canola plastid 34.85 36.84
CDY31481 Canola nucleus 16.88 35.94
CDX92090 Canola mitochondrion, nucleus 27.71 35.85
CDX72551 Canola nucleus 25.54 29.43
CDY67210 Canola nucleus 25.32 28.82
CDX85942 Canola nucleus 25.32 28.68
CDY33634 Canola nucleus 25.32 28.68
CDX96631 Canola nucleus 25.32 28.54
CDY62475 Canola nucleus 21.43 28.21
CDY69551 Canola nucleus 21.64 28.17
CDY30357 Canola nucleus 24.24 27.38
CDY26816 Canola nucleus 24.03 27.27
CDY29184 Canola nucleus 24.46 26.97
CDX68105 Canola nucleus 22.94 26.84
CDY29520 Canola nucleus 23.81 26.83
CDX88261 Canola nucleus 24.89 26.74
CDX87612 Canola nucleus 24.89 26.68
CDY07838 Canola nucleus 24.03 26.55
CDX80988 Canola plastid 23.81 25.7
CDY11354 Canola plastid 23.81 25.4
CDX69311 Canola nucleus 22.51 24.82
CDX75659 Canola nucleus 22.29 24.07
CDY19803 Canola golgi, nucleus, plasma membrane, plastid 43.72 20.42
CDY33338 Canola nucleus 24.24 19.18
CDY35083 Canola cytosol, endoplasmic reticulum, nucleus 23.81 18.06
CDY14091 Canola plastid 24.03 16.92
CDX96819 Canola nucleus 23.59 16.9
CDX83953 Canola nucleus 22.51 15.88
CDY04980 Canola nucleus 24.24 15.6
Protein Annotations
Gene3D:1.10.472.10MapMan:13.1.1.1.1GO:A0A078DDK2EnsemblPlants:CDX87305ProteinID:CDX87305ProteinID:CDX87305.1
InterPro:Cyclin-likeInterPro:Cyclin-like_sfInterPro:Cyclin_C-domInterPro:Cyclin_NGO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634EnsemblPlantsGene:GSBRNA2T00146269001PFAM:PF00134PFAM:PF02984PIRSF:PIRSF001771
PANTHER:PTHR10177PANTHER:PTHR10177:SF346SMART:SM00385SMART:SM01332SUPFAM:SSF47954UniParc:UPI0004EE99D9
SEG:seg:::::
Description
BnaA07g35680D
Coordinates
chrLK031850:+:93652..95847
Molecular Weight (calculated)
51819.4 Da
IEP (calculated)
9.304
GRAVY (calculated)
-0.269
Length
462 amino acids
Sequence
(BLAST)
001: MKEIAVSGNT VPLHARPVTR ALASALRASK LLITSSSPNQ GRVLRANSKR RALDDDKKNA SPPKKKKKRA LLKDITNVTS HNNSYTTSCF SAAKLQVQIK
101: KGRACSSKVA SSSATSQVTD DVKLQVVSDS EGVSLSGCTG TNEASSSSKP SSRLPPRPLG RLTSTVERSC VGGSSTVASI PKFIDIDSDV KDPLLCSLYA
201: PDIHYNLRVS ELKRRPCPDC MGRTQRDVTQ TMRGILVDWL VEVSEEYTLA SDTLYLTVYL IDWFLHGNCM ERQRLQLLGI TCMLIASKYE EIYAPRIEEF
301: CFITDNTYTR DEVLEMESQV LKHFSFQIYT PTSKTFLRRF LRAAQPSHLM MPSVEMEFLA NYLTELTLIE CQFLKYLPSV IAASAVFLAK WTMNQSSHPW
401: NATLEHYTTY KASDLKECVQ ALQDLQLNTK GCPLNSIRIK YRQDKFKCVA VFTSPKVPER LF
Best Arabidopsis Sequence Match ( AT1G15570.1 )
(BLAST)
001: MGKENAVSRP FTRSLASALR ASEVTSTTQN QQRVNTKRPA LEDTRATGPN KRKKRAVLGE ITNVNSNTAI LEAKNSKQIK KGRGHGLAST SQLATSVTSE
101: VTDLQSRTDA KVEVASNTAG NLSVSKGTDN TADNCIEIWN SRLPPRPLGR SASTAEKSAV IGSSTVPDIP KFVDIDSDDK DPLLCCLYAP EIHYNLRVSE
201: LKRRPLPDFM ERIQKDVTQS MRGILVDWLV EVSEEYTLAS DTLYLTVYLI DWFLHGNYVQ RQQLQLLGIT CMLIASKYEE ISAPRIEEFC FITDNTYTRD
301: QVLEMENQVL KHFSFQIYTP TPKTFLRRFL RAAQASRLSP SLEVEFLASY LTELTLIDYH FLKFLPSVVA ASAVFLAKWT MDQSNHPWNP TLEHYTTYKA
401: SDLKASVHAL QDLQLNTKGC PLSAIRMKYR QEKYKSVAVL TSPKLLDTLF
Arabidopsis Description
CYCA2-3CYCA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WNJ4]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.