Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032202.1-P | Field mustard | plastid | 95.26 | 100.0 |
| CDY25649 | Canola | plastid | 95.94 | 97.25 |
| CDX85466 | Canola | plastid | 78.78 | 82.7 |
| CDY02719 | Canola | plastid | 79.68 | 82.28 |
| AT1G44110.1 | Thale cress | plastid | 79.01 | 76.09 |
| Os05t0237100-01 | Rice | extracellular | 27.77 | 62.44 |
| KRH64625 | Soybean | plastid | 61.63 | 56.41 |
| KRH53279 | Soybean | plastid | 60.72 | 56.04 |
| TraesCS1B01G151800.3 | Wheat | nucleus | 43.57 | 54.37 |
| VIT_18s0001g02060.t01 | Wine grape | plastid | 60.5 | 54.14 |
| CDX88368 | Canola | plastid | 46.05 | 53.68 |
| CDX87520 | Canola | nucleus | 46.73 | 53.63 |
| Zm00001d032128_P001 | Maize | cytosol | 18.96 | 53.16 |
| CDY41784 | Canola | plastid | 40.63 | 52.94 |
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 25.06 | 52.61 |
| Solyc11g005090.1.1 | Tomato | plastid | 57.34 | 51.84 |
| Os12t0298950-00 | Rice | nucleus | 52.14 | 51.68 |
| PGSC0003DMT400015424 | Potato | plastid | 54.63 | 51.27 |
| KRH17986 | Soybean | plastid | 57.79 | 50.89 |
| KRH16410 | Soybean | plastid | 56.88 | 50.0 |
| Os01t0233100-00 | Rice | nucleus, plastid | 54.85 | 49.49 |
| CDX92090 | Canola | mitochondrion, nucleus | 39.5 | 49.02 |
| Os01t0233500-01 | Rice | nucleus, plastid | 55.53 | 48.43 |
| GSMUA_Achr5P06960_001 | Banana | nucleus, plastid | 54.18 | 48.0 |
| TraesCS3B01G183400.1 | Wheat | plastid | 55.08 | 47.84 |
| GSMUA_Achr2P19220_001 | Banana | nucleus, plastid | 54.18 | 47.81 |
| TraesCS3D01G164600.1 | Wheat | plastid | 54.85 | 47.65 |
| TraesCS3A01G157000.1 | Wheat | plastid | 55.08 | 47.56 |
| Zm00001d040381_P001 | Maize | plastid | 55.98 | 46.53 |
| CDY06752 | Canola | nucleus | 29.8 | 46.32 |
| TraesCS1D01G134100.2 | Wheat | nucleus, plastid | 49.44 | 45.91 |
| KXG21616 | Sorghum | nucleus, plastid | 47.18 | 43.63 |
| Zm00001d009011_P001 | Maize | nucleus, plastid | 48.98 | 42.55 |
| CDY48212 | Canola | nucleus | 35.67 | 41.91 |
| CDY61993 | Canola | nucleus | 35.67 | 41.91 |
| CDY22369 | Canola | nucleus | 33.18 | 41.88 |
| CDY17091 | Canola | nucleus | 33.18 | 41.06 |
| CDY66770 | Canola | nucleus | 33.18 | 40.61 |
| CDY17037 | Canola | nucleus, plastid | 33.18 | 40.38 |
| CDY23653 | Canola | nucleus | 32.51 | 40.34 |
| CDY06757 | Canola | nucleus, plastid | 32.96 | 40.22 |
| Zm00001d021353_P002 | Maize | mitochondrion, nucleus | 18.06 | 40.0 |
| CDY47596 | Canola | nucleus | 32.73 | 39.94 |
| CDY17039 | Canola | nucleus | 32.51 | 39.67 |
| CDY47595 | Canola | nucleus, plastid | 33.18 | 39.62 |
| TraesCS1A01G138300.1 | Wheat | nucleus, plastid | 46.73 | 39.43 |
| CDY31481 | Canola | nucleus | 18.96 | 38.71 |
| CDX81722 | Canola | nucleus, plastid | 35.21 | 38.71 |
| CDY53304 | Canola | plastid | 35.67 | 38.63 |
| CDX96836 | Canola | nucleus, plastid | 37.02 | 37.27 |
| CDX87087 | Canola | plastid | 34.99 | 37.17 |
| CDX79389 | Canola | plastid | 36.12 | 36.95 |
| CDY39984 | Canola | plastid | 37.25 | 36.83 |
| CDX67944 | Canola | plastid | 35.89 | 36.81 |
| CDX69768 | Canola | nucleus, plastid | 36.12 | 36.61 |
| CDY38664 | Canola | nucleus, plastid | 37.47 | 36.48 |
| CDX97090 | Canola | nucleus | 35.89 | 36.47 |
| CDY66415 | Canola | nucleus | 35.67 | 36.41 |
| CDY37592 | Canola | mitochondrion, plastid | 37.47 | 36.32 |
| CDY36574 | Canola | mitochondrion, nucleus | 35.44 | 36.01 |
| CDX87305 | Canola | plastid | 37.25 | 35.71 |
| Zm00001d010404_P001 | Maize | nucleus | 38.37 | 35.05 |
| CDY62475 | Canola | nucleus | 24.61 | 31.05 |
| CDY69551 | Canola | nucleus | 24.83 | 30.99 |
| CDX96631 | Canola | nucleus | 27.99 | 30.24 |
| CDY33634 | Canola | nucleus | 27.54 | 29.9 |
| CDY29520 | Canola | nucleus | 27.54 | 29.76 |
| CDX72551 | Canola | nucleus | 26.86 | 29.68 |
| CDX85942 | Canola | nucleus | 27.09 | 29.41 |
| CDY67210 | Canola | nucleus | 26.64 | 29.06 |
| CDX69311 | Canola | nucleus | 27.31 | 28.88 |
| CDX75659 | Canola | nucleus | 27.54 | 28.5 |
| CDX68105 | Canola | nucleus | 25.28 | 28.35 |
| CDX88261 | Canola | nucleus | 27.31 | 28.14 |
| CDX87612 | Canola | nucleus | 27.31 | 28.07 |
| CDY29184 | Canola | nucleus | 26.41 | 27.92 |
| CDY07838 | Canola | nucleus | 26.19 | 27.75 |
| CDY11354 | Canola | plastid | 27.09 | 27.71 |
| CDX80988 | Canola | plastid | 26.64 | 27.57 |
| CDY26816 | Canola | nucleus | 25.28 | 27.52 |
| CDY30357 | Canola | nucleus | 25.28 | 27.38 |
| CDY33338 | Canola | nucleus | 24.15 | 18.32 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 24.15 | 17.57 |
| CDY14091 | Canola | plastid | 25.73 | 17.38 |
| CDX96819 | Canola | nucleus | 23.93 | 16.43 |
| CDX83953 | Canola | nucleus | 23.48 | 15.88 |
| CDY04980 | Canola | nucleus | 25.51 | 15.74 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 34.99 | 15.67 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.1 | GO:A0A078JGZ7 | UniProt:A0A078JGZ7 | EnsemblPlants:CDY65994 | ProteinID:CDY65994 |
| ProteinID:CDY65994.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00051133001 | PFAM:PF00134 | PFAM:PF02984 |
| PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF239 | SMART:SM00385 | SMART:SM01332 |
| SUPFAM:SSF47954 | UniParc:UPI0004EE993E | SEG:seg | : | : | : |
Description
BnaA05g35600DBnaA05g35600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGZ7]
Coordinates
chrLK035033:+:699..3416
Molecular Weight (calculated)
50142.7 Da
IEP (calculated)
6.395
GRAVY (calculated)
-0.357
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNTNQNRRP SSVKPISNTA VMAKKRAPLG NITNQKKESQ IPNSSVDFAH CSNKSAKLKQ APTQPVCVNA TSLLCEQTQA SSSSKSDDES MSIDETKSTC
101: DSYKSPGVEY IDSEDVSIER KAFSNLYITP SSETTNVNYC RRYVLSEMEN KDKFINIDNN DADPQLCPPF ACDIYNHLRA AEAKKRPAVD YMETVQKDVN
201: SSMRGILVDW LVEVSEEYRL VPETLYLTVN YIDRYLSGNV ISRHKLQLLG VACMMVAAKY EEICAPQVEE FCYITDNTYL KDEVLDMESA VLNYLKFEMS
301: APTAKCFLRR FFRAAHGVNE APCMQLECMA NYIAELSLLE YTMLSHSPSL VAASAIFLAM YILDPTRRPW NSTLQLYTQY GAMELRGCVK DLQRFCSNAH
401: VSTLPAVRDK YSQHKYKFVA KKFCPSIIPP EFFNNSCIDQ FSN
101: DSYKSPGVEY IDSEDVSIER KAFSNLYITP SSETTNVNYC RRYVLSEMEN KDKFINIDNN DADPQLCPPF ACDIYNHLRA AEAKKRPAVD YMETVQKDVN
201: SSMRGILVDW LVEVSEEYRL VPETLYLTVN YIDRYLSGNV ISRHKLQLLG VACMMVAAKY EEICAPQVEE FCYITDNTYL KDEVLDMESA VLNYLKFEMS
301: APTAKCFLRR FFRAAHGVNE APCMQLECMA NYIAELSLLE YTMLSHSPSL VAASAIFLAM YILDPTRRPW NSTLQLYTQY GAMELRGCVK DLQRFCSNAH
401: VSTLPAVRDK YSQHKYKFVA KKFCPSIIPP EFFNNSCIDQ FSN
001: MSNILQNRRS SFSSSTKSSL AKRQAPSSSE NSVKLMPAMT KKRAPLSNIT NQKIASRLQN SDSVHCSNKS AKLKIAPSVC VNASFSSNLQ QSIVPHKVAS
101: SPSKSDDGSV SMDETRSSSD SYKSPQVEYI ENDDVSAVVS IERKALSNLF ITPNSETIDN YCSRDVLSDM KKMDKNQIVN IDSNNGDPQL CATFACDIYK
201: HLRASEAKKR PDVDYMERVQ KDVNSSMRGI LVDWLIEVSE EYRLVPETLY LTVNYIDRYL SGNVISRQKL QLLGVACMMI AAKYEEICAP QVEEFCYITD
301: NTYLKDEVLD MESDVLNYLK FEMTAPTTKC FLRRFVRAAH GVHEAPLMQL ECMANYIAEL SLLEYTMLSH SPSLVAASAI FLAKYILDPT RRPWNSTLQH
401: YTQYKAMELR GCVKDLQRLC STAHGSTLPA VREKYSQHKY KFVAKKFCPS VIPQEFFNNS
101: SPSKSDDGSV SMDETRSSSD SYKSPQVEYI ENDDVSAVVS IERKALSNLF ITPNSETIDN YCSRDVLSDM KKMDKNQIVN IDSNNGDPQL CATFACDIYK
201: HLRASEAKKR PDVDYMERVQ KDVNSSMRGI LVDWLIEVSE EYRLVPETLY LTVNYIDRYL SGNVISRQKL QLLGVACMMI AAKYEEICAP QVEEFCYITD
301: NTYLKDEVLD MESDVLNYLK FEMTAPTTKC FLRRFVRAAH GVHEAPLMQL ECMANYIAEL SLLEYTMLSH SPSLVAASAI FLAKYILDPT RRPWNSTLQH
401: YTQYKAMELR GCVKDLQRLC STAHGSTLPA VREKYSQHKY KFVAKKFCPS VIPQEFFNNS
Arabidopsis Description
CYCA1-1CYCA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0H5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.