Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011769.1-P | Field mustard | nucleus | 96.18 | 94.16 |
| CDX75659 | Canola | nucleus | 95.94 | 93.93 |
| AT4G37490.1 | Thale cress | nucleus | 84.73 | 82.94 |
| CDY69551 | Canola | nucleus | 46.3 | 54.65 |
| CDY62475 | Canola | nucleus | 45.35 | 54.13 |
| TraesCSU01G217300.1 | Wheat | cytosol | 27.68 | 53.7 |
| KRH66720 | Soybean | endoplasmic reticulum, vacuole | 25.06 | 52.76 |
| KRH66715 | Soybean | nucleus | 47.73 | 51.02 |
| PGSC0003DMT400018480 | Potato | nucleus | 51.55 | 50.82 |
| VIT_08s0040g00930.t01 | Wine grape | nucleus | 54.65 | 50.55 |
| Solyc10g078330.1.1 | Tomato | nucleus | 50.84 | 50.35 |
| CDX80988 | Canola | plastid | 51.31 | 50.23 |
| CDY11354 | Canola | plastid | 51.31 | 49.65 |
| Zm00001d019469_P001 | Maize | extracellular | 16.71 | 48.95 |
| KRG95055 | Soybean | nucleus | 52.98 | 48.79 |
| KRH66713 | Soybean | nucleus | 52.27 | 48.24 |
| HORVU0Hr1G001680.1 | Barley | nucleus | 36.75 | 48.12 |
| VIT_13s0067g01420.t01 | Wine grape | nucleus | 52.98 | 48.05 |
| KXG24389 | Sorghum | nucleus | 28.88 | 48.02 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.65 | 47.32 |
| GSMUA_Achr7P21380_001 | Banana | nucleus | 51.31 | 47.05 |
| GSMUA_Achr4P10090_001 | Banana | nucleus | 47.49 | 46.82 |
| PGSC0003DMT400072211 | Potato | nucleus | 51.79 | 46.77 |
| Solyc10g080950.1.1 | Tomato | nucleus | 51.31 | 46.54 |
| KRH66718 | Soybean | plastid | 41.29 | 46.38 |
| HORVU1Hr1G068080.1 | Barley | plastid | 36.99 | 45.32 |
| KRG95056 | Soybean | cytosol | 41.53 | 44.96 |
| GSMUA_Achr10P... | Banana | nucleus | 47.97 | 44.37 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 42.0 | 43.78 |
| HORVU1Hr1G068010.7 | Barley | mitochondrion, nucleus | 43.44 | 43.33 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 44.63 | 42.99 |
| HORVU3Hr1G078880.2 | Barley | nucleus | 46.06 | 42.6 |
| TraesCS1D01G309400.1 | Wheat | nucleus | 44.39 | 42.56 |
| TraesCS3D01G326600.1 | Wheat | nucleus | 46.06 | 42.42 |
| EES03772 | Sorghum | nucleus, plastid | 45.35 | 42.32 |
| Zm00001d012560_P002 | Maize | nucleus, plastid | 45.35 | 42.32 |
| HORVU0Hr1G001690.16 | Barley | nucleus, peroxisome | 44.15 | 42.24 |
| TraesCS1B01G320900.1 | Wheat | nucleus, plastid | 43.91 | 42.2 |
| TraesCS1B01G321000.1 | Wheat | nucleus | 43.91 | 42.2 |
| TraesCS1D01G309300.1 | Wheat | nucleus, plastid | 43.91 | 42.2 |
| TraesCS3A01G333000.2 | Wheat | nucleus | 46.06 | 41.96 |
| TraesCS1A01G309800.1 | Wheat | nucleus | 43.44 | 41.74 |
| TraesCS3B01G363200.3 | Wheat | nucleus | 45.82 | 41.65 |
| CDY31481 | Canola | nucleus | 21.48 | 41.47 |
| TraesCS3D01G195200.1 | Wheat | plastid | 40.57 | 41.16 |
| HORVU0Hr1G026010.1 | Barley | nucleus, plastid | 42.96 | 40.63 |
| HORVU1Hr1G068160.2 | Barley | nucleus, plastid | 42.96 | 40.63 |
| TraesCS3A01G192100.1 | Wheat | nucleus, plastid | 40.1 | 40.58 |
| Os01t0281200-01 | Rice | nucleus | 40.57 | 40.19 |
| Zm00001d010656_P001 | Maize | nucleus | 42.48 | 39.91 |
| Zm00001d043164_P002 | Maize | nucleus | 46.06 | 39.88 |
| EES18429 | Sorghum | mitochondrion | 42.48 | 38.7 |
| Os05t0493500-00 | Rice | nucleus | 43.44 | 37.37 |
| EES02793 | Sorghum | nucleus | 40.81 | 36.93 |
| Zm00001d008221_P001 | Maize | nucleus | 41.53 | 36.33 |
| CDY26816 | Canola | nucleus | 34.37 | 35.38 |
| TraesCS7A01G229300.1 | Wheat | endoplasmic reticulum | 27.45 | 34.95 |
| Os02t0627800-00 | Rice | cytosol, mitochondrion, peroxisome | 32.94 | 34.85 |
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 17.42 | 34.6 |
| CDY30357 | Canola | nucleus | 33.65 | 34.47 |
| CDY07838 | Canola | nucleus | 34.37 | 34.45 |
| CDY06752 | Canola | nucleus | 23.39 | 34.39 |
| CDY29184 | Canola | nucleus | 34.37 | 34.37 |
| HORVU3Hr1G040990.2 | Barley | nucleus, plastid | 40.1 | 34.15 |
| CDY14091 | Canola | plastid | 52.51 | 33.54 |
| CDX72551 | Canola | nucleus | 31.98 | 33.42 |
| CDX85942 | Canola | nucleus | 32.46 | 33.33 |
| CDY67210 | Canola | nucleus | 31.74 | 32.76 |
| CDX88368 | Canola | plastid | 29.36 | 32.37 |
| CDX68105 | Canola | nucleus | 30.31 | 32.15 |
| CDY29520 | Canola | nucleus | 31.26 | 31.95 |
| CDY33634 | Canola | nucleus | 31.03 | 31.86 |
| CDX96631 | Canola | nucleus | 31.03 | 31.71 |
| CDX87612 | Canola | nucleus | 32.46 | 31.55 |
| CDX88261 | Canola | nucleus | 32.22 | 31.4 |
| Zm00001d020033_P001 | Maize | nucleus | 39.86 | 30.7 |
| CDY41784 | Canola | plastid | 24.82 | 30.59 |
| CDX87520 | Canola | nucleus | 28.16 | 30.57 |
| CDX92090 | Canola | mitochondrion, nucleus | 26.01 | 30.53 |
| CDY04980 | Canola | nucleus | 52.27 | 30.5 |
| CDY22369 | Canola | nucleus | 25.54 | 30.48 |
| CDY17091 | Canola | nucleus | 25.78 | 30.17 |
| Zm00001d020996_P001 | Maize | nucleus | 39.14 | 30.15 |
| CDY17037 | Canola | nucleus, plastid | 25.78 | 29.67 |
| CDY06757 | Canola | nucleus, plastid | 25.3 | 29.2 |
| CDY17039 | Canola | nucleus | 25.3 | 29.2 |
| CDY47596 | Canola | nucleus | 25.3 | 29.2 |
| CDY47595 | Canola | nucleus, plastid | 25.78 | 29.11 |
| CDY61993 | Canola | nucleus | 26.01 | 28.91 |
| CDY23653 | Canola | nucleus | 24.58 | 28.85 |
| CDY66770 | Canola | nucleus | 24.58 | 28.45 |
| CDY48212 | Canola | nucleus | 25.54 | 28.38 |
| CDY65994 | Canola | plastid | 28.88 | 27.31 |
| CDY53304 | Canola | plastid | 26.49 | 27.14 |
| CDY25649 | Canola | plastid | 27.92 | 26.77 |
| CDY02719 | Canola | plastid | 27.21 | 26.57 |
| CDX85466 | Canola | plastid | 26.73 | 26.54 |
| CDX87087 | Canola | plastid | 26.25 | 26.38 |
| CDX81722 | Canola | nucleus, plastid | 25.3 | 26.3 |
| CDX69768 | Canola | nucleus, plastid | 26.73 | 25.63 |
| CDX97090 | Canola | nucleus | 26.49 | 25.46 |
| CDX79389 | Canola | plastid | 26.25 | 25.4 |
| CDX67944 | Canola | plastid | 26.01 | 25.23 |
| CDY36574 | Canola | mitochondrion, nucleus | 26.01 | 25.0 |
| CDY66415 | Canola | nucleus | 25.3 | 24.42 |
| CDX96836 | Canola | nucleus, plastid | 25.54 | 24.32 |
| CDY37592 | Canola | mitochondrion, plastid | 26.01 | 23.85 |
| CDY38664 | Canola | nucleus, plastid | 25.78 | 23.74 |
| CDY39984 | Canola | plastid | 25.3 | 23.66 |
| CDY33338 | Canola | nucleus | 31.5 | 22.6 |
| CDX87305 | Canola | plastid | 24.82 | 22.51 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 30.79 | 21.18 |
| CDX96819 | Canola | nucleus | 32.46 | 21.09 |
| CDX83953 | Canola | nucleus | 32.46 | 20.76 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 26.49 | 11.22 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | GO:A0A078BWX3 | EnsemblPlants:CDX69311 | ProteinID:CDX69311 | ProteinID:CDX69311.1 |
| InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00131142001 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF267 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI0004EE6E90 | SEG:seg | : | : | : | : |
Description
BnaC01g01420D
Coordinates
chrLK031789:-:4068418..4070295
Molecular Weight (calculated)
47492.2 Da
IEP (calculated)
7.379
GRAVY (calculated)
-0.356
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MMASRSIVPQ QTTGDVVVIV EDDDDKKAAK GRNRQVLRDI GNVVRRNHPK NNDPAKINHP RTRSQHAPLV ELVKPVAVPK PKKRAEKPKD VEVIEISSDS
101: DEELGLVAVQ EKKKTTVSYT SVLTARSKAA CGGLKKKEEI VDIDSVDAKS DLAAVEYVED IYSFYKSVES EWRPTDYMRS QPEINEKMRL ILVEWLIDVC
201: VRFELNPETF YLTVNIMDRF LSAKPIPRKE LQLVGLSALL MSSKYEEIWP PQVEDLADIA DHAYSHKQIL VMEKTILSTL EWYLTVPTHY VFLARFIKAS
301: IADQRMENMV HYLAELGVMH YDTTIMFSPS LVAAAAIYAA RSALHQVPIW TNTLKHHTGY SETQLMDCAK LLAFQQWKQQ EEGSESKKGA LRKKYSKEER
401: FGVAMIPPAK SLLTGTDSA
101: DEELGLVAVQ EKKKTTVSYT SVLTARSKAA CGGLKKKEEI VDIDSVDAKS DLAAVEYVED IYSFYKSVES EWRPTDYMRS QPEINEKMRL ILVEWLIDVC
201: VRFELNPETF YLTVNIMDRF LSAKPIPRKE LQLVGLSALL MSSKYEEIWP PQVEDLADIA DHAYSHKQIL VMEKTILSTL EWYLTVPTHY VFLARFIKAS
301: IADQRMENMV HYLAELGVMH YDTTIMFSPS LVAAAAIYAA RSALHQVPIW TNTLKHHTGY SETQLMDCAK LLAFQQWKQQ EEGSESKKGA LRKKYSKEER
401: FGVAMIPPAK SLLTGTDSA
001: MMTSRSIVPQ QSTDDVVVVD GKNVAKGRNR QVLGDIGNVV RGNYPKNNEP EKINHRPRTR SQNPTLLVED NLKKPVVKRN AVPKPKKVAG KPKVVDVIEI
101: SSDSDEELGL VAAREKKATK KKATTYTSVL TARSKAACGL EKKQKEKIVD IDSADVENDL AAVEYVEDIY SFYKSVESEW RPRDYMASQP DINEKMRLIL
201: VEWLIDVHVR FELNPETFYL TVNILDRFLS VKPVPRKELQ LVGLSALLMS AKYEEIWPPQ VEDLVDIADH AYSHKQILVM EKTILSTLEW YLTVPTHYVF
301: LARFIKASIA DEKMENMVHY LAELGVMHYD TMIMFSPSMV AASAIYAARS SLRQVPIWTS TLKHHTGYSE TQLMDCAKLL AYQQWKQQEE GSESSTKGAL
401: RKKYSKDERF AVALIPPAKA LLTGTESA
101: SSDSDEELGL VAAREKKATK KKATTYTSVL TARSKAACGL EKKQKEKIVD IDSADVENDL AAVEYVEDIY SFYKSVESEW RPRDYMASQP DINEKMRLIL
201: VEWLIDVHVR FELNPETFYL TVNILDRFLS VKPVPRKELQ LVGLSALLMS AKYEEIWPPQ VEDLVDIADH AYSHKQILVM EKTILSTLEW YLTVPTHYVF
301: LARFIKASIA DEKMENMVHY LAELGVMHYD TMIMFSPSMV AASAIYAARS SLRQVPIWTS TLKHHTGYSE TQLMDCAKLL AYQQWKQQEE GSESSTKGAL
401: RKKYSKDERF AVALIPPAKA LLTGTESA
Arabidopsis Description
CYCB1-1Cyclin-B1-1 [Source:UniProtKB/Swiss-Prot;Acc:P30183]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.