Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES18429 | Sorghum | mitochondrion | 80.04 | 77.61 |
| HORVU0Hr1G001680.1 | Barley | nucleus | 45.74 | 63.75 |
| TraesCS1D01G309300.1 | Wheat | nucleus, plastid | 60.76 | 62.16 |
| TraesCS1B01G320900.1 | Wheat | nucleus, plastid | 60.31 | 61.7 |
| TraesCS1A01G309800.1 | Wheat | nucleus | 59.19 | 60.55 |
| HORVU1Hr1G068010.7 | Barley | mitochondrion, nucleus | 56.95 | 60.48 |
| TraesCS1D01G309400.1 | Wheat | nucleus | 59.19 | 60.41 |
| HORVU1Hr1G068160.2 | Barley | nucleus, plastid | 59.42 | 59.82 |
| HORVU0Hr1G026010.1 | Barley | nucleus, plastid | 59.42 | 59.82 |
| HORVU1Hr1G068080.1 | Barley | plastid | 45.74 | 59.65 |
| TraesCS1B01G321000.1 | Wheat | nucleus | 58.3 | 59.63 |
| HORVU0Hr1G001690.16 | Barley | nucleus, peroxisome | 57.85 | 58.9 |
| Zm00001d012560_P002 | Maize | nucleus, plastid | 55.16 | 54.79 |
| Zm00001d019469_P001 | Maize | extracellular | 17.26 | 53.85 |
| Os05t0493500-00 | Rice | nucleus | 55.16 | 50.51 |
| Zm00001d043164_P002 | Maize | nucleus | 53.14 | 48.97 |
| PGSC0003DMT400058457 | Potato | nucleus | 45.74 | 48.8 |
| CDY69551 | Canola | nucleus | 38.79 | 48.73 |
| CDY62475 | Canola | nucleus | 37.67 | 47.86 |
| Solyc01g009040.2.1 | Tomato | nucleus | 46.64 | 47.82 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.39 | 46.98 |
| Bra028741.1-P | Field mustard | nucleus | 43.05 | 46.27 |
| KRH66720 | Soybean | endoplasmic reticulum, vacuole | 20.63 | 46.23 |
| KRG95055 | Soybean | nucleus | 46.86 | 45.93 |
| VIT_08s0040g00930.t01 | Wine grape | nucleus | 46.64 | 45.92 |
| PGSC0003DMT400015245 | Potato | nucleus | 45.07 | 45.79 |
| Solyc06g073610.2.1 | Tomato | nucleus | 45.07 | 45.68 |
| Bra002046.1-P | Field mustard | nucleus | 40.13 | 45.55 |
| VIT_06s0009g02090.t01 | Wine grape | nucleus | 42.38 | 45.22 |
| Solyc10g080950.1.1 | Tomato | nucleus | 46.64 | 45.02 |
| KRH66713 | Soybean | nucleus | 45.52 | 44.71 |
| AT3G11520.1 | Thale cress | nucleus | 41.48 | 44.69 |
| PGSC0003DMT400072211 | Potato | nucleus | 46.41 | 44.61 |
| PGSC0003DMT400018480 | Potato | nucleus | 42.38 | 44.47 |
| AT2G26760.1 | Thale cress | nucleus | 38.56 | 44.44 |
| Bra005880.1-P | Field mustard | nucleus, plastid | 41.26 | 44.44 |
| KRH66715 | Soybean | nucleus | 39.01 | 44.39 |
| Solyc10g078330.1.1 | Tomato | nucleus | 41.7 | 43.97 |
| CDY11354 | Canola | plastid | 42.38 | 43.65 |
| VIT_13s0067g01420.t01 | Wine grape | nucleus | 45.07 | 43.51 |
| KRH73516 | Soybean | nucleus | 42.83 | 43.41 |
| KRH14611 | Soybean | nucleus | 42.6 | 43.28 |
| AT4G37490.1 | Thale cress | nucleus | 41.48 | 43.22 |
| CDX80988 | Canola | plastid | 41.26 | 42.99 |
| CDX69311 | Canola | nucleus | 39.91 | 42.48 |
| CDX75659 | Canola | nucleus | 40.36 | 42.06 |
| AT5G06150.1 | Thale cress | nucleus | 41.93 | 42.02 |
| Bra011769.1-P | Field mustard | nucleus | 40.13 | 41.82 |
| KRH66718 | Soybean | plastid | 34.75 | 41.55 |
| KRG95056 | Soybean | cytosol | 34.98 | 40.31 |
| Zm00001d008221_P001 | Maize | nucleus | 39.69 | 36.95 |
| Zm00001d026129_P001 | Maize | nucleus | 30.49 | 31.92 |
| Zm00001d036360_P002 | Maize | nucleus | 30.27 | 31.84 |
| Zm00001d020033_P001 | Maize | nucleus | 38.56 | 31.62 |
| Zm00001d020996_P001 | Maize | nucleus | 37.44 | 30.7 |
| Zm00001d002662_P010 | Maize | nucleus | 30.27 | 29.67 |
| CDY14091 | Canola | plastid | 43.05 | 29.27 |
| Zm00001d032128_P001 | Maize | cytosol | 10.31 | 29.11 |
| Zm00001d033365_P002 | Maize | nucleus | 23.54 | 28.23 |
| CDY04980 | Canola | nucleus | 42.83 | 26.6 |
| Zm00001d013744_P001 | Maize | nucleus | 21.08 | 26.33 |
| AT1G34460.5 | Thale cress | cytosol | 28.7 | 25.7 |
| Zm00001d030849_P001 | Maize | nucleus | 23.32 | 24.59 |
| Zm00001d041334_P001 | Maize | nucleus, plastid | 23.09 | 23.57 |
| Zm00001d014756_P006 | Maize | nucleus, plastid | 26.91 | 23.03 |
| Zm00001d040381_P001 | Maize | plastid | 26.68 | 22.33 |
| Zm00001d021353_P002 | Maize | mitochondrion, nucleus | 9.87 | 22.0 |
| Zm00001d023732_P002 | Maize | mitochondrion, nucleus, plastid | 22.42 | 20.62 |
| Zm00001d009011_P001 | Maize | nucleus, plastid | 23.09 | 20.2 |
| Zm00001d010404_P001 | Maize | nucleus | 20.85 | 19.18 |
| Zm00001d048127_P001 | Maize | plastid | 19.73 | 18.37 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | EntrezGene:542307 | ProteinID:AQK94555.1 | ncoils:Coil | InterPro:Cyclin-like |
| InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | UniProt:K7V0X7 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 |
| PANTHER:PTHR10177 | PANTHER:PTHR10177:SF267 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0001ED312E |
| EnsemblPlantsGene:Zm00001d010656 | EnsemblPlants:Zm00001d010656_P001 | EnsemblPlants:Zm00001d010656_T001 | SEG:seg | : | : |
Description
cyclin1Cyclin1
Coordinates
chr8:-:123103586..123106431
Molecular Weight (calculated)
48336.0 Da
IEP (calculated)
9.922
GRAVY (calculated)
-0.275
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRNHRAAA APQPANRGAA RVAGKQNAAA AAAGTRRALG DIGNVVSDAL DRAIKLPEGI HRPITRSFGA QLMKAALANK NADAAVAPAQ PVAARAVTKP
101: ARKVTTKNVP RPGAGQAPKE NKKPSAEGAA AGSGRSVQKN RRKKPACTLS TVLSARSKAA CGLTEKPKEP IEDIDKFDGD NQLALVDYVE DIYTFYKTAQ
201: HESRPIDYMG NQPELSPRMR SILADWLIES HRRFQLMPET LYLTIYIVDR YLSLQPTPRR ELQLVGVAAL LIACKYEEIW APEVNDLIHI ADGAFNRSQI
301: LAAEKAILNS MEWNLTVPTP YHFLLRFAKA AGSADEQLQH TINFFGELAL MDYGMVMTNP STAAACAVYA ARLTLGRSPL WTETLKHHTG LNEQQIMEGA
401: KTLVGSHAAS ASPDARLKAV YQKYATEQFG RVALHPPAPA ALPDLV
101: ARKVTTKNVP RPGAGQAPKE NKKPSAEGAA AGSGRSVQKN RRKKPACTLS TVLSARSKAA CGLTEKPKEP IEDIDKFDGD NQLALVDYVE DIYTFYKTAQ
201: HESRPIDYMG NQPELSPRMR SILADWLIES HRRFQLMPET LYLTIYIVDR YLSLQPTPRR ELQLVGVAAL LIACKYEEIW APEVNDLIHI ADGAFNRSQI
301: LAAEKAILNS MEWNLTVPTP YHFLLRFAKA AGSADEQLQH TINFFGELAL MDYGMVMTNP STAAACAVYA ARLTLGRSPL WTETLKHHTG LNEQQIMEGA
401: KTLVGSHAAS ASPDARLKAV YQKYATEQFG RVALHPPAPA ALPDLV
001: MATRANVPEQ VRGAPLVDGL KIQNKNGAVK SRRALGDIGN LVSVPGVQGG KAQPPINRPI TRSFRAQLLA NAQLERKPIN GDNKVPALGP KRQPLAARNP
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS
Arabidopsis Description
CYCB1-2Cyclin-B1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39067]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.