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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 3
  • nucleus 2
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d035567_P001 Maize nucleus 79.39 83.2
Zm00001d037582_P001 Maize cytosol, extracellular 79.01 44.14
VIT_15s0046g01350.t01 Wine grape cytosol 76.72 42.41
AT5G05620.1 Thale cress cytosol 75.57 41.77
AT3G61650.1 Thale cress cytosol 75.57 41.77
CDY11370 Canola cytosol 75.19 41.65
CDX71723 Canola cytosol 75.19 41.65
Bra007622.1-P Field mustard cytosol 75.19 41.65
Zm00001d009780_P003 Maize cytosol 79.77 41.3
KRG97131 Soybean cytosol 74.43 41.14
KRH68880 Soybean endoplasmic reticulum 74.43 41.14
PGSC0003DMT400039263 Potato cytosol 73.28 40.51
Solyc03g111380.2.1 Tomato cytosol 73.28 40.51
Zm00001d033457_P001 Maize plasma membrane 27.1 15.96
Zm00001d015348_P002 Maize plastid 26.34 15.54
Zm00001d013612_P002 Maize plasma membrane 26.34 15.44
Zm00001d012556_P001 Maize plastid 26.34 15.4
Zm00001d027295_P002 Maize plasma membrane 25.95 15.25
Zm00001d048065_P002 Maize cytosol, mitochondrion 24.05 14.06
Zm00001d013367_P001 Maize plastid 24.05 13.97
Zm00001d043158_P001 Maize plasma membrane 26.34 13.91
Zm00001d033850_P003 Maize cytosol 23.66 13.75
Zm00001d013159_P001 Maize cytosol 23.28 13.56
Zm00001d021891_P001 Maize cytosol 22.9 13.33
Zm00001d006651_P005 Maize plasma membrane 22.9 13.33
Zm00001d026623_P001 Maize cytosol, plastid 17.94 11.33
Zm00001d036626_P001 Maize cytosol 9.16 10.57
Zm00001d046996_P001 Maize cytosol 8.78 9.96
Zm00001d013139_P001 Maize cytosol 11.07 9.9
Zm00001d040509_P001 Maize cytosol 8.02 9.46
Zm00001d008216_P002 Maize cytosol 8.02 8.79
Zm00001d034022_P001 Maize cytosol 8.4 8.4
Zm00001d010275_P001 Maize cytosol 8.4 7.38
Protein Annotations
Gene3D:1.10.287.600Gene3D:3.30.1330.20Gene3D:3.40.50.1440MapMan:35.1UniProt:A0A1D6GL69ProteinID:AQK64063.1
GO:GO:0000166GO:GO:0000930GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005488
GO:GO:0005525GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005856
GO:GO:0005874GO:GO:0007017GO:GO:0007020GO:GO:0008150GO:GO:0009987GO:GO:0016043
GO:GO:0016787GO:GO:0031122InterPro:Gamma_tubulinInterPro:IPR023123InterPro:IPR036525InterPro:IPR037103
PFAM:PF00091PFAM:PF03953PRINTS:PR01161PRINTS:PR01164PANTHER:PTHR11588PANTHER:PTHR11588:SF7
SMART:SM00865SUPFAM:SSF52490SUPFAM:SSF55307InterPro:Tub_FtsZ_CInterPro:TubulinInterPro:Tubulin/FtsZ_2-layer-sand-dom
InterPro:Tubulin/FtsZ_C_sfInterPro:Tubulin/FtsZ_GTPase_sfInterPro:Tubulin_CInterPro:Tubulin_FtsZ_GTPaseUniParc:UPI00084438F6EnsemblPlantsGene:Zm00001d013636
EnsemblPlants:Zm00001d013636_P001EnsemblPlants:Zm00001d013636_T001::::
Description
Tubulin gamma-2 chain
Coordinates
chr5:-:15975118..15980598
Molecular Weight (calculated)
29648.5 Da
IEP (calculated)
10.392
GRAVY (calculated)
-0.030
Length
262 amino acids
Sequence
(BLAST)
001: MAPAGGQQQP MKRPRPTEFS GRRVVVQPYN SLLTLKRLTL NADCVVVLDN TTLNSIAVER LHFSNPTFAQ TNSLVSTVIS ASTTTLRHPG YMNNDLVGLL
101: ASLIPTPRCH FLMTGYTPLT VERQVNMIRK TTVLDVMRRL LQTKNVMVSS YARTKEASQA KYISILNIIQ GEVDPTQVQF CQMTPSVDIY CLLFISKMDN
201: IVSSDVVLQV SGLMLANHTS IRHLFGKCLG QYEKLRKKQT FLDNYRKFPM FAVRTFFSKF QI
Best Arabidopsis Sequence Match ( AT3G61650.1 )
(BLAST)
001: MPREIITLQV GQCGNQIGME FWKQLCLEHG ISKDGILEDF ATQGGDRKDV FFYQADDQHY IPRALLIDLE PRVINGIQNG DYRNLYNHEN IFVADHGGGA
101: GNNWASGYHQ GKGVEEEIMD MIDREADGSD SLEGFVLCHS IAGGTGSGMG SYLLETLNDR YSKKLVQTYS VFPNQMETSD VVVQPYNSLL TLKRLTLNAD
201: CVVVLDNTAL GRIAVERLHL TNPTFAQTNS LVSTVMSAST TTLRYPGYMN NDLVGLLASL IPTPRCHFLM TGYTPLTVER QANVIRKTTV LDVMRRLLQT
301: KNIMVSSYAR NKEASQAKYI SILNIIQGEV DPTQVHESLQ RIRERKLVNF IEWGPASIQV ALSKKSPYVQ TAHRVSGLML ASHTSIRHLF SKCLSQYDKL
401: RKKQAFLDNY RKFPMFADND LSEFDESRDI IESLVDEYKA CESPDYIKWG MEDPEQLMTG EGNASGVVDP KLAF
Arabidopsis Description
TUBG1Tubulin gamma-1 chain [Source:UniProtKB/Swiss-Prot;Acc:P38557]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.