Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d035567_P001 | Maize | nucleus | 79.39 | 83.2 |
Zm00001d037582_P001 | Maize | cytosol, extracellular | 79.01 | 44.14 |
VIT_15s0046g01350.t01 | Wine grape | cytosol | 76.72 | 42.41 |
AT5G05620.1 | Thale cress | cytosol | 75.57 | 41.77 |
AT3G61650.1 | Thale cress | cytosol | 75.57 | 41.77 |
CDY11370 | Canola | cytosol | 75.19 | 41.65 |
CDX71723 | Canola | cytosol | 75.19 | 41.65 |
Bra007622.1-P | Field mustard | cytosol | 75.19 | 41.65 |
Zm00001d009780_P003 | Maize | cytosol | 79.77 | 41.3 |
KRG97131 | Soybean | cytosol | 74.43 | 41.14 |
KRH68880 | Soybean | endoplasmic reticulum | 74.43 | 41.14 |
PGSC0003DMT400039263 | Potato | cytosol | 73.28 | 40.51 |
Solyc03g111380.2.1 | Tomato | cytosol | 73.28 | 40.51 |
Zm00001d033457_P001 | Maize | plasma membrane | 27.1 | 15.96 |
Zm00001d015348_P002 | Maize | plastid | 26.34 | 15.54 |
Zm00001d013612_P002 | Maize | plasma membrane | 26.34 | 15.44 |
Zm00001d012556_P001 | Maize | plastid | 26.34 | 15.4 |
Zm00001d027295_P002 | Maize | plasma membrane | 25.95 | 15.25 |
Zm00001d048065_P002 | Maize | cytosol, mitochondrion | 24.05 | 14.06 |
Zm00001d013367_P001 | Maize | plastid | 24.05 | 13.97 |
Zm00001d043158_P001 | Maize | plasma membrane | 26.34 | 13.91 |
Zm00001d033850_P003 | Maize | cytosol | 23.66 | 13.75 |
Zm00001d013159_P001 | Maize | cytosol | 23.28 | 13.56 |
Zm00001d021891_P001 | Maize | cytosol | 22.9 | 13.33 |
Zm00001d006651_P005 | Maize | plasma membrane | 22.9 | 13.33 |
Zm00001d026623_P001 | Maize | cytosol, plastid | 17.94 | 11.33 |
Zm00001d036626_P001 | Maize | cytosol | 9.16 | 10.57 |
Zm00001d046996_P001 | Maize | cytosol | 8.78 | 9.96 |
Zm00001d013139_P001 | Maize | cytosol | 11.07 | 9.9 |
Zm00001d040509_P001 | Maize | cytosol | 8.02 | 9.46 |
Zm00001d008216_P002 | Maize | cytosol | 8.02 | 8.79 |
Zm00001d034022_P001 | Maize | cytosol | 8.4 | 8.4 |
Zm00001d010275_P001 | Maize | cytosol | 8.4 | 7.38 |
Protein Annotations
Gene3D:1.10.287.600 | Gene3D:3.30.1330.20 | Gene3D:3.40.50.1440 | MapMan:35.1 | UniProt:A0A1D6GL69 | ProteinID:AQK64063.1 |
GO:GO:0000166 | GO:GO:0000930 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 |
GO:GO:0005874 | GO:GO:0007017 | GO:GO:0007020 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
GO:GO:0016787 | GO:GO:0031122 | InterPro:Gamma_tubulin | InterPro:IPR023123 | InterPro:IPR036525 | InterPro:IPR037103 |
PFAM:PF00091 | PFAM:PF03953 | PRINTS:PR01161 | PRINTS:PR01164 | PANTHER:PTHR11588 | PANTHER:PTHR11588:SF7 |
SMART:SM00865 | SUPFAM:SSF52490 | SUPFAM:SSF55307 | InterPro:Tub_FtsZ_C | InterPro:Tubulin | InterPro:Tubulin/FtsZ_2-layer-sand-dom |
InterPro:Tubulin/FtsZ_C_sf | InterPro:Tubulin/FtsZ_GTPase_sf | InterPro:Tubulin_C | InterPro:Tubulin_FtsZ_GTPase | UniParc:UPI00084438F6 | EnsemblPlantsGene:Zm00001d013636 |
EnsemblPlants:Zm00001d013636_P001 | EnsemblPlants:Zm00001d013636_T001 | : | : | : | : |
Description
Tubulin gamma-2 chain
Coordinates
chr5:-:15975118..15980598
Molecular Weight (calculated)
29648.5 Da
IEP (calculated)
10.392
GRAVY (calculated)
-0.030
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPAGGQQQP MKRPRPTEFS GRRVVVQPYN SLLTLKRLTL NADCVVVLDN TTLNSIAVER LHFSNPTFAQ TNSLVSTVIS ASTTTLRHPG YMNNDLVGLL
101: ASLIPTPRCH FLMTGYTPLT VERQVNMIRK TTVLDVMRRL LQTKNVMVSS YARTKEASQA KYISILNIIQ GEVDPTQVQF CQMTPSVDIY CLLFISKMDN
201: IVSSDVVLQV SGLMLANHTS IRHLFGKCLG QYEKLRKKQT FLDNYRKFPM FAVRTFFSKF QI
101: ASLIPTPRCH FLMTGYTPLT VERQVNMIRK TTVLDVMRRL LQTKNVMVSS YARTKEASQA KYISILNIIQ GEVDPTQVQF CQMTPSVDIY CLLFISKMDN
201: IVSSDVVLQV SGLMLANHTS IRHLFGKCLG QYEKLRKKQT FLDNYRKFPM FAVRTFFSKF QI
001: MPREIITLQV GQCGNQIGME FWKQLCLEHG ISKDGILEDF ATQGGDRKDV FFYQADDQHY IPRALLIDLE PRVINGIQNG DYRNLYNHEN IFVADHGGGA
101: GNNWASGYHQ GKGVEEEIMD MIDREADGSD SLEGFVLCHS IAGGTGSGMG SYLLETLNDR YSKKLVQTYS VFPNQMETSD VVVQPYNSLL TLKRLTLNAD
201: CVVVLDNTAL GRIAVERLHL TNPTFAQTNS LVSTVMSAST TTLRYPGYMN NDLVGLLASL IPTPRCHFLM TGYTPLTVER QANVIRKTTV LDVMRRLLQT
301: KNIMVSSYAR NKEASQAKYI SILNIIQGEV DPTQVHESLQ RIRERKLVNF IEWGPASIQV ALSKKSPYVQ TAHRVSGLML ASHTSIRHLF SKCLSQYDKL
401: RKKQAFLDNY RKFPMFADND LSEFDESRDI IESLVDEYKA CESPDYIKWG MEDPEQLMTG EGNASGVVDP KLAF
101: GNNWASGYHQ GKGVEEEIMD MIDREADGSD SLEGFVLCHS IAGGTGSGMG SYLLETLNDR YSKKLVQTYS VFPNQMETSD VVVQPYNSLL TLKRLTLNAD
201: CVVVLDNTAL GRIAVERLHL TNPTFAQTNS LVSTVMSAST TTLRYPGYMN NDLVGLLASL IPTPRCHFLM TGYTPLTVER QANVIRKTTV LDVMRRLLQT
301: KNIMVSSYAR NKEASQAKYI SILNIIQGEV DPTQVHESLQ RIRERKLVNF IEWGPASIQV ALSKKSPYVQ TAHRVSGLML ASHTSIRHLF SKCLSQYDKL
401: RKKQAFLDNY RKFPMFADND LSEFDESRDI IESLVDEYKA CESPDYIKWG MEDPEQLMTG EGNASGVVDP KLAF
Arabidopsis Description
TUBG1Tubulin gamma-1 chain [Source:UniProtKB/Swiss-Prot;Acc:P38557]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.