Factsheet for AT3G61650.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007622.1-P	Field mustard	cytosol	98.31	98.52
CDX71723	Canola	cytosol	98.31	98.52
CDY11370	Canola	cytosol	98.31	98.52
AT5G05620.1	Thale cress	cytosol	98.1	98.1
VIT_15s0046g01350.t01	Wine grape	cytosol	96.62	96.62
KRH68880	Soybean	endoplasmic reticulum	94.09	94.09
KRG97131	Soybean	cytosol	93.67	93.67
PGSC0003DMT400039263	Potato	cytosol	93.46	93.46
Solyc03g111380.2.1	Tomato	cytosol	93.25	93.25
Os05t0156600-01	Rice	cytosol	91.98	92.96
EES19069	Sorghum	cytosol	91.35	92.32
TraesCS1A01G099400.1	Wheat	cytosol	89.45	90.41
HORVU1Hr1G023030.2	Barley	cytosol	89.45	90.41
TraesCS1B01G124800.1	Wheat	cytosol	89.45	90.41
TraesCS1D01G107300.1	Wheat	cytosol	89.45	90.41
GSMUA_Achr1P14750_001	Banana	cytosol	90.3	89.54
Zm00001d035567_P001	Maize	nucleus	44.51	84.4
Zm00001d013636_P001	Maize	nucleus, plastid	41.77	75.57
AT5G44340.1	Thale cress	cytosol	33.76	36.04
AT1G20010.1	Thale cress	cytosol	33.54	35.41
AT4G20890.1	Thale cress	cytosol	33.12	35.36
AT5G12250.1	Thale cress	cytosol	33.33	35.19
AT2G29550.1	Thale cress	cytosol	33.33	35.19
AT1G75780.1	Thale cress	cytosol	33.12	35.12
AT5G62700.1	Thale cress	cytosol	33.33	35.11
AT5G62690.1	Thale cress	cytosol	33.33	35.11
AT5G23860.1	Thale cress	cytosol	33.12	34.97
AT4G14960.2	Thale cress	cytosol	28.9	30.44
AT1G50010.1	Thale cress	cytosol	28.9	30.44
AT1G04820.1	Thale cress	cytosol	28.9	30.44
AT5G19780.1	Thale cress	cytosol	28.69	30.22
AT5G19770.1	Thale cress	cytosol	28.69	30.22
AT1G64740.1	Thale cress	cytosol	28.27	29.78

Protein Annotations

Gene3D:1.10.287.600	MapMan:20.1.2.1.1	Gene3D:3.30.1330.20	Gene3D:3.40.50.1440	EntrezGene:825338	UniProt:A0A178VJV9
ProteinID:AAA20653.1	ProteinID:AEE80236.1	ArrayExpress:AT3G61650	EnsemblPlantsGene:AT3G61650	RefSeq:AT3G61650	TAIR:AT3G61650
RefSeq:AT3G61650-TAIR-G	EnsemblPlants:AT3G61650.1	TAIR:AT3G61650.1	ProteinID:CAB71095.1	GO:GO:0000166	GO:GO:0000911
GO:GO:0000930	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005739
GO:GO:0005815	GO:GO:0005856	GO:GO:0005874	GO:GO:0005886	GO:GO:0005938	GO:GO:0007017
GO:GO:0007020	GO:GO:0007049	GO:GO:0007275	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607
GO:GO:0009624	GO:GO:0009653	GO:GO:0009791	GO:GO:0009987	GO:GO:0010103	GO:GO:0016020
GO:GO:0016043	GO:GO:0016049	GO:GO:0016787	GO:GO:0030154	GO:GO:0031122	GO:GO:0040007
GO:GO:0048366	GO:GO:0048768	GO:GO:0051641	InterPro:Gamma_tubulin	InterPro:IPR023123	InterPro:IPR036525
InterPro:IPR037103	RefSeq:NP_191724.1	ProteinID:OAP05751.1	UniProt:P38557	PFAM:PF00091	PFAM:PF03953
PO:PO:0000293	PRINTS:PR01161	PRINTS:PR01164	ScanProsite:PS00227	PANTHER:PTHR11588	PANTHER:PTHR11588:SF7
SMART:SM00864	SMART:SM00865	SUPFAM:SSF52490	SUPFAM:SSF55307	Symbol:TUBG1	InterPro:Tub_FtsZ_C
InterPro:Tubulin	InterPro:Tubulin/FtsZ_2-layer-sand-dom	InterPro:Tubulin/FtsZ_C_sf	InterPro:Tubulin/FtsZ_GTPase_sf	InterPro:Tubulin_C	InterPro:Tubulin_CS
InterPro:Tubulin_FtsZ_GTPase	UniParc:UPI0000136A52	:	:	:	:

Description

TUBG1Tubulin gamma-1 chain [Source:UniProtKB/Swiss-Prot;Acc:P38557]

Coordinates

chr3:-:22812082..22815216

Molecular Weight (calculated)

53249.5 Da

IEP (calculated)

5.786

GRAVY (calculated)

-0.304

Length

474 amino acids

Sequence
(BLAST)

001: MPREIITLQV GQCGNQIGME FWKQLCLEHG ISKDGILEDF ATQGGDRKDV FFYQADDQHY IPRALLIDLE PRVINGIQNG DYRNLYNHEN IFVADHGGGA
101: GNNWASGYHQ GKGVEEEIMD MIDREADGSD SLEGFVLCHS IAGGTGSGMG SYLLETLNDR YSKKLVQTYS VFPNQMETSD VVVQPYNSLL TLKRLTLNAD
201: CVVVLDNTAL GRIAVERLHL TNPTFAQTNS LVSTVMSAST TTLRYPGYMN NDLVGLLASL IPTPRCHFLM TGYTPLTVER QANVIRKTTV LDVMRRLLQT
301: KNIMVSSYAR NKEASQAKYI SILNIIQGEV DPTQVHESLQ RIRERKLVNF IEWGPASIQV ALSKKSPYVQ TAHRVSGLML ASHTSIRHLF SKCLSQYDKL
401: RKKQAFLDNY RKFPMFADND LSEFDESRDI IESLVDEYKA CESPDYIKWG MEDPEQLMTG EGNASGVVDP KLAF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.