Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90152 | Sorghum | cytosol, mitochondrion, peroxisome | 97.23 | 97.23 |
| Zm00001d031485_P001 | Maize | mitochondrion | 91.08 | 89.97 |
| TraesCS7D01G247700.1 | Wheat | cytosol | 87.08 | 86.81 |
| TraesCS7A01G248700.1 | Wheat | cytosol | 87.08 | 86.81 |
| TraesCS7B01G142600.1 | Wheat | cytosol | 86.77 | 86.5 |
| Os08t0512600-01 | Rice | cytosol, plasma membrane | 85.85 | 85.58 |
| GSMUA_Achr3P03700_001 | Banana | cytosol | 77.54 | 83.44 |
| HORVU7Hr1G051180.3 | Barley | cytosol | 80.31 | 78.14 |
| GSMUA_Achr9P12350_001 | Banana | cytosol | 76.31 | 77.02 |
| KRH06014 | Soybean | cytosol | 72.92 | 75.48 |
| KRH37522 | Soybean | cytosol | 73.54 | 75.39 |
| Solyc04g082840.2.1 | Tomato | cytosol | 72.92 | 75.24 |
| PGSC0003DMT400025910 | Potato | cytosol | 72.92 | 75.24 |
| GSMUA_Achr11P... | Banana | cytosol | 77.23 | 75.15 |
| VIT_18s0122g00550.t01 | Wine grape | cytosol | 74.46 | 74.92 |
| AT1G76540.1 | Thale cress | cytosol | 72.0 | 74.76 |
| AT1G20930.1 | Thale cress | cytosol | 72.31 | 74.6 |
| CDX87588 | Canola | cytosol | 71.38 | 74.12 |
| Bra015735.1-P | Field mustard | cytosol | 71.38 | 74.12 |
| KRH48128 | Soybean | cytosol | 71.38 | 73.65 |
| CDX88294 | Canola | cytosol | 70.77 | 73.48 |
| CDY31856 | Canola | cytosol | 70.77 | 72.78 |
| CDY01345 | Canola | cytosol | 70.77 | 72.78 |
| Bra012258.1-P | Field mustard | cytosol | 70.77 | 72.78 |
| KRH17547 | Soybean | cytosol | 72.92 | 70.33 |
| Zm00001d044672_P005 | Maize | cytosol | 59.69 | 58.61 |
| Zm00001d048497_P002 | Maize | cytosol | 50.46 | 54.13 |
| Zm00001d053930_P001 | Maize | cytosol | 48.62 | 54.11 |
| Zm00001d027373_P003 | Maize | cytosol | 51.08 | 45.23 |
| Zm00001d010476_P001 | Maize | cytosol | 39.08 | 29.67 |
| Zm00001d038109_P002 | Maize | cytosol | 38.77 | 29.3 |
| Zm00001d014438_P001 | Maize | cytosol | 39.38 | 27.18 |
| Zm00001d034834_P009 | Maize | cytosol | 33.23 | 25.47 |
| Zm00001d035964_P001 | Maize | cytosol | 32.0 | 22.13 |
| Zm00001d000169_P009 | Maize | cytosol | 31.38 | 21.98 |
| Zm00001d017729_P023 | Maize | cytosol | 31.08 | 20.61 |
| Zm00001d017128_P002 | Maize | nucleus | 40.62 | 19.88 |
| Zm00001d003222_P016 | Maize | nucleus | 41.54 | 19.34 |
| Zm00001d025739_P006 | Maize | nucleus | 41.85 | 18.89 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.2 | MapMan:18.4.3.1.2 | Gene3D:3.30.200.20 | UniProt:A0A1D6P5F3 | ProteinID:AQL05177.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 |
| ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF178 | InterPro:Prot_kinase_dom |
| InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0001CAABAF | EnsemblPlantsGene:Zm00001d046912 |
| EnsemblPlants:Zm00001d046912_P001 | EnsemblPlants:Zm00001d046912_T001 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr9:+:110202169..110204205
Molecular Weight (calculated)
36719.9 Da
IEP (calculated)
9.591
GRAVY (calculated)
-0.314
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MATIQNKPTP TAPSTTTGGG LRAMDLYEKL EKVGEGTYGK VYKAREKATG RIVALKKTRL PEDDEGVPPT ALREVSLLRM LSQDPHVVRL LDLKQGVNKE
101: GQTILYLVFE YMDTDLKKFI RGYRANHEKI PAQTVKILMY QLCKGVGFVH GRGVLHRDLK PHNLLMDRKT MALKIADLGL SRAITVPVKK YTHEILTLWY
201: RAPEVLLGAT HYSTPVDIWS VGCIFAELVT NQPLFPGDSE LQQLLHIFKL LGTPNEEMWP GVGKLPNWHV YPQWKPTKLS TLVPGLDSDG YDLLEKMLAY
301: EPGKRVSAKK ALEHPYFNDV NKEVY
101: GQTILYLVFE YMDTDLKKFI RGYRANHEKI PAQTVKILMY QLCKGVGFVH GRGVLHRDLK PHNLLMDRKT MALKIADLGL SRAITVPVKK YTHEILTLWY
201: RAPEVLLGAT HYSTPVDIWS VGCIFAELVT NQPLFPGDSE LQQLLHIFKL LGTPNEEMWP GVGKLPNWHV YPQWKPTKLS TLVPGLDSDG YDLLEKMLAY
301: EPGKRVSAKK ALEHPYFNDV NKEVY
001: MDEGVIAVSA MDAFEKLEKV GEGTYGKVYR AREKATGKIV ALKKTRLHED EEGVPSTTLR EISILRMLAR DPHVVRLMDV KQGLSKEGKT VLYLVFEYMD
101: TDVKKFIRSF RSTGKNIPTQ TIKSLMYQLC KGMAFCHGHG ILHRDLKPHN LLMDPKTMRL KIADLGLARA FTLPMKKYTH EILTLWYRAP EVLLGATHYS
201: TAVDMWSVGC IFAELVTNQA IFQGDSELQQ LLHIFKLFGT PNEEMWPGVS TLKNWHEYPQ WKPSTLSSAV PNLDEAGVDL LSKMLQYEPA KRISAKMAME
301: HPYFDDLPEK SSL
101: TDVKKFIRSF RSTGKNIPTQ TIKSLMYQLC KGMAFCHGHG ILHRDLKPHN LLMDPKTMRL KIADLGLARA FTLPMKKYTH EILTLWYRAP EVLLGATHYS
201: TAVDMWSVGC IFAELVTNQA IFQGDSELQQ LLHIFKLFGT PNEEMWPGVS TLKNWHEYPQ WKPSTLSSAV PNLDEAGVDL LSKMLQYEPA KRISAKMAME
301: HPYFDDLPEK SSL
Arabidopsis Description
CDKB2-1CDKB2 [Source:UniProtKB/TrEMBL;Acc:A0A178WJF2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.