Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g082840.2.1 | Tomato | cytosol | 99.05 | 99.05 |
| KRH06014 | Soybean | cytosol | 83.49 | 83.76 |
| Bra015735.1-P | Field mustard | cytosol | 81.59 | 82.11 |
| AT1G20930.1 | Thale cress | cytosol | 81.9 | 81.9 |
| CDX87588 | Canola | cytosol | 81.27 | 81.79 |
| KRH37522 | Soybean | cytosol | 82.22 | 81.7 |
| KRH48128 | Soybean | cytosol | 81.27 | 81.27 |
| CDX88294 | Canola | cytosol | 80.63 | 81.15 |
| VIT_18s0122g00550.t01 | Wine grape | cytosol | 83.17 | 81.11 |
| AT1G76540.1 | Thale cress | cytosol | 80.32 | 80.83 |
| CDY31856 | Canola | cytosol | 80.95 | 80.7 |
| CDY01345 | Canola | cytosol | 80.95 | 80.7 |
| Bra012258.1-P | Field mustard | cytosol | 80.95 | 80.7 |
| GSMUA_Achr3P03700_001 | Banana | cytosol | 77.14 | 80.46 |
| KRH17547 | Soybean | cytosol | 84.44 | 78.93 |
| TraesCS7D01G247700.1 | Wheat | cytosol | 75.56 | 73.01 |
| TraesCS7B01G142600.1 | Wheat | cytosol | 75.56 | 73.01 |
| TraesCS7A01G248700.1 | Wheat | cytosol | 75.56 | 73.01 |
| Zm00001d046912_P001 | Maize | cytosol, mitochondrion, peroxisome | 75.24 | 72.92 |
| GSMUA_Achr9P12350_001 | Banana | cytosol | 73.97 | 72.36 |
| EER90152 | Sorghum | cytosol, mitochondrion, peroxisome | 74.6 | 72.31 |
| Os08t0512600-01 | Rice | cytosol, plasma membrane | 73.65 | 71.17 |
| Zm00001d031485_P001 | Maize | mitochondrion | 73.97 | 70.82 |
| GSMUA_Achr11P... | Banana | cytosol | 74.29 | 70.06 |
| PGSC0003DMT400071215 | Potato | cytosol | 64.44 | 67.0 |
| HORVU7Hr1G051180.3 | Barley | cytosol | 69.84 | 65.87 |
| OQU80908 | Sorghum | mitochondrion | 74.6 | 55.69 |
| PGSC0003DMT400075349 | Potato | cytosol | 51.43 | 55.1 |
| PGSC0003DMT400047738 | Potato | cytosol | 48.25 | 50.16 |
| PGSC0003DMT400077428 | Potato | cytosol | 43.17 | 45.64 |
| PGSC0003DMT400092022 | Potato | cytosol | 28.25 | 41.01 |
| PGSC0003DMT400086876 | Potato | cytosol | 40.32 | 40.32 |
| PGSC0003DMT400065635 | Potato | cytosol | 34.29 | 34.62 |
| PGSC0003DMT400032131 | Potato | cytosol | 38.41 | 28.88 |
| PGSC0003DMT400051979 | Potato | cytosol | 32.7 | 23.57 |
| PGSC0003DMT400047517 | Potato | cytosol | 33.65 | 23.56 |
| PGSC0003DMT400044987 | Potato | nucleus | 43.49 | 17.19 |
| PGSC0003DMT400034649 | Potato | nucleus | 43.49 | 16.69 |
Protein Annotations
| Gene3D:1.10.510.10 | EntrezGene:102587449 | MapMan:13.1.1.2.2 | MapMan:18.4.3.1.2 | Gene3D:3.30.200.20 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | UniProt:M1AMB9 | PFAM:PF00069 |
| EnsemblPlantsGene:PGSC0003DMG400010003 | PGSC:PGSC0003DMG400010003 | EnsemblPlants:PGSC0003DMT400025910 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR24056 | PANTHER:PTHR24056:SF178 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | UniParc:UPI000295BD45 | RefSeq:XP_006342190.1 | : | : | : |
Description
B2-type cyclin dependent kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400010003]
Coordinates
chr4:-:72007211..72009261
Molecular Weight (calculated)
36057.1 Da
IEP (calculated)
9.148
GRAVY (calculated)
-0.296
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAKNVGKS VSAMEAFEKL EKVGEGTYGK VYRARDRVTG KIVALKKTRL HEDEEGVPPT TLREISLLRM LSRDPHIVRL MDVKQGQNKE GKTVLYLVFE
101: YMDTDVKKFI RTFRAKGETM PLKIVKSLMY QLCKGVAFCH GHGVLHRDLK PHNLLMDRKT NVLKLADFGL GRAYTLPIKK YTHEILTLWY RAPEVLLGAT
201: HYSTAVDMWS VGCIFAELVT NQALFPGDSE LQQLLHIFRL LGTPNEELWP GVSKLVNWHE YPQWKPQLLS TVVPGLDEDG IHLLSEMLHY EPSRRISAKK
301: AMEHPYFDDL DKTPL
101: YMDTDVKKFI RTFRAKGETM PLKIVKSLMY QLCKGVAFCH GHGVLHRDLK PHNLLMDRKT NVLKLADFGL GRAYTLPIKK YTHEILTLWY RAPEVLLGAT
201: HYSTAVDMWS VGCIFAELVT NQALFPGDSE LQQLLHIFRL LGTPNEELWP GVSKLVNWHE YPQWKPQLLS TVVPGLDEDG IHLLSEMLHY EPSRRISAKK
301: AMEHPYFDDL DKTPL
001: MDNNGVKPAV SAMEAFEKLE KVGEGTYGKV YRAREKATGM IVALKKTRLH EDEEGVPPTT LREISILRML ARDPHIVRLM DVKQGINKEG KTVLYLVFEY
101: VDTDLKKFIR SFRQAGQNIP QNTVKCLMYQ LCKGMAFCHG HGVLHRDLKP HNLLMDRKTM TLKIADLGLA RAFTLPMKKY THEILTLWYR APEVLLGATH
201: YSTGVDMWSV GCIFAELVTK QAIFAGDSEL QQLLRIFRLL GTPNEEVWPG VSKLKDWHEY PQWKPLSLST AVPNLDEAGL DLLSKMLEYE PAKRISAKKA
301: MEHPYFDDLP DKSSL
101: VDTDLKKFIR SFRQAGQNIP QNTVKCLMYQ LCKGMAFCHG HGVLHRDLKP HNLLMDRKTM TLKIADLGLA RAFTLPMKKY THEILTLWYR APEVLLGATH
201: YSTGVDMWSV GCIFAELVTK QAIFAGDSEL QQLLRIFRLL GTPNEEVWPG VSKLKDWHEY PQWKPLSLST AVPNLDEAGL DLLSKMLEYE PAKRISAKKA
301: MEHPYFDDLP DKSSL
Arabidopsis Description
CDKB2-2Cyclin-dependent kinase B2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG64]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.