Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g074720.1.1 | Tomato | cytosol, nucleus | 99.01 | 99.01 |
| VIT_08s0056g00210.t01 | Wine grape | cytosol | 91.42 | 91.42 |
| GSMUA_Achr11P... | Banana | cytosol | 86.8 | 86.8 |
| Os01t0897000-01 | Rice | cytosol | 84.16 | 84.16 |
| Bra014835.1-P | Field mustard | cytosol | 83.83 | 83.55 |
| CDX76164 | Canola | cytosol | 83.83 | 83.55 |
| AT3G54180.1 | Thale cress | cytosol | 84.82 | 83.17 |
| KRH47306 | Soybean | cytosol, nucleus, plasma membrane | 86.14 | 83.12 |
| CDY13189 | Canola | cytosol | 83.17 | 82.89 |
| CDY07716 | Canola | cytosol | 84.49 | 82.85 |
| CDY62439 | Canola | cytosol, nucleus, plasma membrane | 84.49 | 82.58 |
| Bra000077.1-P | Field mustard | cytosol, nucleus, plasma membrane | 84.49 | 82.05 |
| AT2G38620.2 | Thale cress | cytosol | 84.16 | 81.99 |
| EES15619 | Sorghum | cytosol | 82.51 | 81.17 |
| TraesCS5D01G147100.1 | Wheat | cytosol | 80.86 | 80.59 |
| TraesCS5B01G144100.2 | Wheat | cytosol | 80.86 | 80.59 |
| TraesCS5A01G145500.1 | Wheat | cytosol | 80.53 | 80.26 |
| TraesCS4D01G121200.2 | Wheat | cytosol | 80.86 | 79.29 |
| TraesCS4B01G123100.1 | Wheat | cytosol | 80.53 | 78.96 |
| TraesCS4A01G192300.1 | Wheat | cytosol | 80.2 | 78.64 |
| Zm00001d044672_P005 | Maize | cytosol | 82.18 | 75.23 |
| GSMUA_Achr4P02420_001 | Banana | cytosol | 59.74 | 75.1 |
| HORVU5Hr1G046190.1 | Barley | plastid | 82.18 | 66.76 |
| PGSC0003DMT400025910 | Potato | cytosol | 67.0 | 64.44 |
| HORVU4Hr1G023490.7 | Barley | endoplasmic reticulum, vacuole | 80.2 | 64.12 |
| PGSC0003DMT400075349 | Potato | cytosol | 56.77 | 58.5 |
| PGSC0003DMT400047738 | Potato | cytosol | 53.14 | 53.14 |
| PGSC0003DMT400077428 | Potato | cytosol | 47.85 | 48.66 |
| PGSC0003DMT400092022 | Potato | cytosol | 29.37 | 41.01 |
| PGSC0003DMT400086876 | Potato | cytosol | 42.57 | 40.95 |
| PGSC0003DMT400065635 | Potato | cytosol | 36.3 | 35.26 |
| PGSC0003DMT400032131 | Potato | cytosol | 41.91 | 30.31 |
| PGSC0003DMT400047517 | Potato | cytosol | 36.3 | 24.44 |
| PGSC0003DMT400051979 | Potato | cytosol | 33.99 | 23.57 |
| PGSC0003DMT400044987 | Potato | nucleus | 44.55 | 16.94 |
| PGSC0003DMT400034649 | Potato | nucleus | 44.55 | 16.44 |
Protein Annotations
| Gene3D:1.10.510.10 | EntrezGene:102586889 | MapMan:13.1.1.2.2 | MapMan:18.4.3.1.2 | Gene3D:3.30.200.20 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | UniProt:M1CNC8 | PFAM:PF00069 |
| EnsemblPlantsGene:PGSC0003DMG400027690 | PGSC:PGSC0003DMG400027690 | EnsemblPlants:PGSC0003DMT400071215 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR24056 | PANTHER:PTHR24056:SF11 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | UniParc:UPI000296F6A8 | RefSeq:XP_006362328.1 | : | : | : |
Description
B1-type cyclin dependent kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400027690]
Coordinates
chr10:+:48427756..48431526
Molecular Weight (calculated)
34345.8 Da
IEP (calculated)
8.311
GRAVY (calculated)
-0.214
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKYEKLEKV GEGTYGKVYK AKDKATGQLV ALKKTRLEMD EEGIPPTALR EISLLQMLSH SLYIVRLLCV EHIDKNGKPI LYLVFEYLDT DLKKFIDSHR
101: KGPNARALPT ALIQSFLYQL CKGVAHCHSH GVLHRDLKPQ NLLVDKEKGI LKIADLGLGR AFTVPMKSYT HEIVTLWYRA PEVLLGSTHY STAVDMWSVG
201: CIFAEMVRRQ ALFPGDSEFQ QLLHIFRLLG TPTDKQWPGV SSLRDWHVYP QWEPQNLASA VPALGPDGVD LLTKMLKFDP ADRISAKAAL EHPYFDSLDK
301: SQF
101: KGPNARALPT ALIQSFLYQL CKGVAHCHSH GVLHRDLKPQ NLLVDKEKGI LKIADLGLGR AFTVPMKSYT HEIVTLWYRA PEVLLGSTHY STAVDMWSVG
201: CIFAEMVRRQ ALFPGDSEFQ QLLHIFRLLG TPTDKQWPGV SSLRDWHVYP QWEPQNLASA VPALGPDGVD LLTKMLKFDP ADRISAKAAL EHPYFDSLDK
301: SQF
001: MEKYEKLEKV GEGTYGKVYK AMEKTTGKLV ALKKTRLEMD EEGIPPTALR EISLLQMLSQ SIYIVRLLCV EHVIQSKDST VSHSPKSNLY LVFEYLDTDL
101: KKFIDSHRKG SNPRPLEASL VQRFMFQLFK GVAHCHSHGV LHRDLKPQNL LLDKDKGILK IADLGLSRAF TVPLKAYTHE IVTLWYRAPE VLLGSTHYST
201: AVDIWSVGCI FAEMIRRQAL FPGDSEFQQL LHIFRLLGTP TEQQWPGVMA LRDWHVYPKW EPQDLSRAVP SLSPEGIDLL TQMLKYNPAE RISAKAALDH
301: PYFDSLDKSQ F
101: KKFIDSHRKG SNPRPLEASL VQRFMFQLFK GVAHCHSHGV LHRDLKPQNL LLDKDKGILK IADLGLSRAF TVPLKAYTHE IVTLWYRAPE VLLGSTHYST
201: AVDIWSVGCI FAEMIRRQAL FPGDSEFQQL LHIFRLLGTP TEQQWPGVMA LRDWHVYPKW EPQDLSRAVP SLSPEGIDLL TQMLKYNPAE RISAKAALDH
301: PYFDSLDKSQ F
Arabidopsis Description
CDKB1-2Cyclin-dependent kinase B1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q2V419]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.