Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plasma membrane 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G147100.1 | Wheat | cytosol | 98.68 | 98.68 |
| TraesCS5B01G144100.2 | Wheat | cytosol | 98.03 | 98.03 |
| Os01t0897000-01 | Rice | cytosol | 87.83 | 88.12 |
| TraesCS4A01G192300.1 | Wheat | cytosol | 87.83 | 86.41 |
| GSMUA_Achr11P... | Banana | cytosol | 83.88 | 84.16 |
| EES15619 | Sorghum | cytosol | 83.22 | 82.14 |
| PGSC0003DMT400071215 | Potato | cytosol | 80.26 | 80.53 |
| Solyc10g074720.1.1 | Tomato | cytosol, nucleus | 79.93 | 80.2 |
| VIT_08s0056g00210.t01 | Wine grape | cytosol | 78.62 | 78.88 |
| HORVU5Hr1G046190.1 | Barley | plastid | 96.71 | 78.82 |
| CDY07716 | Canola | cytosol | 78.62 | 77.35 |
| Bra000077.1-P | Field mustard | cytosol, nucleus, plasma membrane | 78.62 | 76.6 |
| AT2G38620.2 | Thale cress | cytosol | 78.29 | 76.53 |
| CDY62439 | Canola | cytosol, nucleus, plasma membrane | 77.96 | 76.45 |
| KRH47306 | Soybean | cytosol, nucleus, plasma membrane | 78.62 | 76.11 |
| CDX76164 | Canola | cytosol | 75.99 | 75.99 |
| Bra014835.1-P | Field mustard | cytosol | 75.99 | 75.99 |
| CDY13189 | Canola | cytosol | 75.66 | 75.66 |
| AT3G54180.1 | Thale cress | cytosol | 76.64 | 75.4 |
| Zm00001d044672_P005 | Maize | cytosol | 81.58 | 74.92 |
| GSMUA_Achr4P02420_001 | Banana | cytosol | 57.24 | 72.2 |
| TraesCS7A01G248700.1 | Wheat | cytosol | 67.76 | 63.19 |
| TraesCS6A01G078200.1 | Wheat | cytosol | 55.26 | 57.34 |
| TraesCS5A01G521700.1 | Wheat | cytosol | 54.93 | 56.8 |
| TraesCS1A01G245600.1 | Wheat | cytosol | 39.47 | 28.3 |
| TraesCS1A01G198100.2 | Wheat | cytosol | 40.13 | 25.96 |
| TraesCS4A01G336800.2 | Wheat | cytosol | 32.57 | 22.25 |
| TraesCS4A01G434800.1 | Wheat | cytosol | 34.87 | 21.9 |
| TraesCS6A01G269400.1 | Wheat | cytosol | 32.57 | 21.52 |
| TraesCS7A01G049000.1 | Wheat | cytosol | 34.54 | 21.34 |
| TraesCS6A01G214100.1 | Wheat | nucleus | 40.79 | 18.37 |
| TraesCS2A01G346500.1 | Wheat | nucleus | 42.76 | 17.91 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.2 | MapMan:18.4.3.1.2 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR24056 | PANTHER:PTHR24056:SF11 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS5A01G145500 | EnsemblPlants:TraesCS5A01G145500.1 | : | : | : |
Description
No Description!
Coordinates
chr5A:-:321718040..321720933
Molecular Weight (calculated)
34390.0 Da
IEP (calculated)
8.866
GRAVY (calculated)
-0.197
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKYEKLEKV GEGTYGKVYK ARVAATGQLV ALKKTRLEMD EEGIPPTALR EISLLRLLSA SLYVVRLLSV EQVTKPCGKT VLYLVFEFLD TDLKKFVDGF
101: RKGPSPRPVP TQVVKSFLYQ LCKGTAHCHG HGVLHRDLKP QNLLIDKEKG VLKIADLGLS RAFTVPMKSY THEIVTLWYR APEVLLGATH YSTGVDIWSI
201: GCIFAEMVRK QALFPGDSEL QQLLHIFRLL GTPNEEKWPG VCALRDWHDY PQWKPQHLSR AVPTLEPEGL DLLGKMLQFD PANRISAKAA MDHPYFDSLD
301: KSQF
101: RKGPSPRPVP TQVVKSFLYQ LCKGTAHCHG HGVLHRDLKP QNLLIDKEKG VLKIADLGLS RAFTVPMKSY THEIVTLWYR APEVLLGATH YSTGVDIWSI
201: GCIFAEMVRK QALFPGDSEL QQLLHIFRLL GTPNEEKWPG VCALRDWHDY PQWKPQHLSR AVPTLEPEGL DLLGKMLQFD PANRISAKAA MDHPYFDSLD
301: KSQF
001: MEKYEKLEKV GEGTYGKVYK AMEKTTGKLV ALKKTRLEMD EEGIPPTALR EISLLQMLSQ SIYIVRLLCV EHVIQSKDST VSHSPKSNLY LVFEYLDTDL
101: KKFIDSHRKG SNPRPLEASL VQRFMFQLFK GVAHCHSHGV LHRDLKPQNL LLDKDKGILK IADLGLSRAF TVPLKAYTHE IVTLWYRAPE VLLGSTHYST
201: AVDIWSVGCI FAEMIRRQAL FPGDSEFQQL LHIFRLLGTP TEQQWPGVMA LRDWHVYPKW EPQDLSRAVP SLSPEGIDLL TQMLKYNPAE RISAKAALDH
301: PYFDSLDKSQ F
101: KKFIDSHRKG SNPRPLEASL VQRFMFQLFK GVAHCHSHGV LHRDLKPQNL LLDKDKGILK IADLGLSRAF TVPLKAYTHE IVTLWYRAPE VLLGSTHYST
201: AVDIWSVGCI FAEMIRRQAL FPGDSEFQQL LHIFRLLGTP TEQQWPGVMA LRDWHVYPKW EPQDLSRAVP SLSPEGIDLL TQMLKYNPAE RISAKAALDH
301: PYFDSLDKSQ F
Arabidopsis Description
CDKB1-2Cyclin-dependent kinase B1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q2V419]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.