Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G247700.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS7B01G142600.1 | Wheat | cytosol | 99.39 | 99.39 |
| Os08t0512600-01 | Rice | cytosol, plasma membrane | 88.96 | 88.96 |
| EER90152 | Sorghum | cytosol, mitochondrion, peroxisome | 87.42 | 87.69 |
| HORVU7Hr1G051180.3 | Barley | cytosol | 89.57 | 87.43 |
| GSMUA_Achr3P03700_001 | Banana | cytosol | 80.67 | 87.09 |
| Zm00001d046912_P001 | Maize | cytosol, mitochondrion, peroxisome | 86.81 | 87.08 |
| Zm00001d031485_P001 | Maize | mitochondrion | 87.73 | 86.93 |
| GSMUA_Achr9P12350_001 | Banana | cytosol | 79.75 | 80.75 |
| GSMUA_Achr11P... | Banana | cytosol | 80.37 | 78.44 |
| KRH06014 | Soybean | cytosol | 75.46 | 78.34 |
| AT1G20930.1 | Thale cress | cytosol | 73.93 | 76.51 |
| VIT_18s0122g00550.t01 | Wine grape | cytosol | 75.77 | 76.47 |
| AT1G76540.1 | Thale cress | cytosol | 73.01 | 76.04 |
| KRH37522 | Soybean | cytosol | 73.93 | 76.03 |
| KRH48128 | Soybean | cytosol | 73.31 | 75.87 |
| PGSC0003DMT400025910 | Potato | cytosol | 73.01 | 75.56 |
| Solyc04g082840.2.1 | Tomato | cytosol | 73.01 | 75.56 |
| Bra015735.1-P | Field mustard | cytosol | 72.09 | 75.08 |
| Bra012258.1-P | Field mustard | cytosol | 72.7 | 75.0 |
| CDY01345 | Canola | cytosol | 72.7 | 75.0 |
| CDY31856 | Canola | cytosol | 72.7 | 75.0 |
| CDX87588 | Canola | cytosol | 71.78 | 74.76 |
| CDX88294 | Canola | cytosol | 71.47 | 74.44 |
| KRH17547 | Soybean | cytosol | 76.69 | 74.18 |
| TraesCS5A01G145500.1 | Wheat | cytosol | 63.19 | 67.76 |
| OQU80908 | Sorghum | mitochondrion | 86.2 | 66.59 |
| TraesCS4A01G192300.1 | Wheat | cytosol | 62.58 | 66.02 |
| TraesCS5A01G521700.1 | Wheat | cytosol | 49.08 | 54.42 |
| TraesCS6A01G078200.1 | Wheat | cytosol | 48.77 | 54.27 |
| TraesCS1A01G245600.1 | Wheat | cytosol | 37.73 | 29.01 |
| TraesCS1A01G198100.2 | Wheat | cytosol | 38.34 | 26.6 |
| TraesCS4A01G336800.2 | Wheat | cytosol | 31.29 | 22.92 |
| TraesCS6A01G269400.1 | Wheat | cytosol | 31.6 | 22.39 |
| TraesCS4A01G434800.1 | Wheat | cytosol | 31.29 | 21.07 |
| TraesCS7A01G049000.1 | Wheat | cytosol | 30.98 | 20.53 |
| TraesCS6A01G214100.1 | Wheat | nucleus | 39.88 | 19.26 |
| TraesCS2A01G346500.1 | Wheat | nucleus | 42.02 | 18.87 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.2 | MapMan:18.4.3.1.2 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PFAM:PF12330 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF178 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 |
| SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS7A01G248700 | EnsemblPlants:TraesCS7A01G248700.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr7A:+:230592369..230593881
Molecular Weight (calculated)
36888.0 Da
IEP (calculated)
8.929
GRAVY (calculated)
-0.301
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MATLQHQNQG AAAPMTTTGG GLRAMDLYEK LEKVGEGTYG KVYKAREKAT GRIVALKKTR LPEDDEGVPP TALREVSLLR MLSQDPHVVR LLDLKQGQNK
101: EGQTILYLVF EYMDTDLKKF IRGHRQNHEK IPAHTVKILM YQLCKGVAFC HGRGVLHRDL KPHNLLMDRK TMALKIADLG LSRAFTVPLK KYTHEILTLW
201: YRAPEVLLGA THYSTPVDMW SVGCIFAELI TTTALFPGDS EVQQLLHIFK LLGTPNEDVW PGVGKLPNWH EYPQWNVSKL SSVIPSLDAD GIDLLEKMLQ
301: YEPAKRISAK KAMEHPYFDD VDKALY
101: EGQTILYLVF EYMDTDLKKF IRGHRQNHEK IPAHTVKILM YQLCKGVAFC HGRGVLHRDL KPHNLLMDRK TMALKIADLG LSRAFTVPLK KYTHEILTLW
201: YRAPEVLLGA THYSTPVDMW SVGCIFAELI TTTALFPGDS EVQQLLHIFK LLGTPNEDVW PGVGKLPNWH EYPQWNVSKL SSVIPSLDAD GIDLLEKMLQ
301: YEPAKRISAK KAMEHPYFDD VDKALY
001: MDNNGVKPAV SAMEAFEKLE KVGEGTYGKV YRAREKATGM IVALKKTRLH EDEEGVPPTT LREISILRML ARDPHIVRLM DVKQGINKEG KTVLYLVFEY
101: VDTDLKKFIR SFRQAGQNIP QNTVKCLMYQ LCKGMAFCHG HGVLHRDLKP HNLLMDRKTM TLKIADLGLA RAFTLPMKKY THEILTLWYR APEVLLGATH
201: YSTGVDMWSV GCIFAELVTK QAIFAGDSEL QQLLRIFRLL GTPNEEVWPG VSKLKDWHEY PQWKPLSLST AVPNLDEAGL DLLSKMLEYE PAKRISAKKA
301: MEHPYFDDLP DKSSL
101: VDTDLKKFIR SFRQAGQNIP QNTVKCLMYQ LCKGMAFCHG HGVLHRDLKP HNLLMDRKTM TLKIADLGLA RAFTLPMKKY THEILTLWYR APEVLLGATH
201: YSTGVDMWSV GCIFAELVTK QAIFAGDSEL QQLLRIFRLL GTPNEEVWPG VSKLKDWHEY PQWKPLSLST AVPNLDEAGL DLLSKMLEYE PAKRISAKKA
301: MEHPYFDDLP DKSSL
Arabidopsis Description
CDKB2-2Cyclin-dependent kinase B2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG64]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.