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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 5
  • mitochondrion 4
PPI

Inferred distinct locusB in Crop

locusBlocations
EER90152 cytosol, nucleus
EER91226 nucleus
EER92677 nucleus
EER95303 nucleus
EER96424
EER97966
EER99015 nucleus
EER99528 nucleus
EES01052
EES01631
EES02793 cytoskeleton, cytoskeleton, cytosol, cytosol, cytosol, cytosol
EES03772 cytoskeleton, cytoskeleton, cytosol, cytosol, cytosol, cytosol
EES04403
EES07560 cytosol, nucleus
EES09201
EES11600
EES11756
EES12664
EES16237 nucleus
EES16322
EES17294 nucleus
EES17375
EES18429 cytoskeleton, cytoskeleton, cytosol, cytosol, cytosol, cytosol
KXG19603 cytosol, nucleus
KXG20945
KXG21616 nucleus
KXG23504 nucleus, nucleus
KXG24389 cytoskeleton, cytoskeleton, cytosol, cytosol, cytosol, cytosol
KXG28235
KXG37587
KXG37588
KXG40187 cytosol, cytosol, nucleus, nucleus
KXG40336
OQU77084 nucleus, nucleus
OQU78227
OQU80908 cytosol, nucleus
OQU89443
OQU91386 nucleus

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G20930.1 EES11756 AT1G47870.1 20407024
AT1G20930.1 EES01052 AT1G51650.1 20706207
AT1G20930.1 KXG28235 AT2G05830.1 20706207
AT1G20930.1 KXG40187 AT2G27960.1 20407024
AT1G20930.1 KXG40187 AT2G27970.1 20407024
AT1G20930.1 EES01631 AT2G41090.1 17360592
AT1G20930.1 EES09201 AT2G41090.1 17360592
AT1G20930.1 EES16322 AT2G41090.1 17360592
AT1G20930.1 OQU78227 AT2G41090.1 17360592
AT1G20930.1 EES01631 AT2G41100.1 17360592
AT1G20930.1 EES09201 AT2G41100.1 17360592
AT1G20930.1 EES16322 AT2G41100.1 17360592
AT1G20930.1 OQU78227 AT2G41100.1 17360592
AT1G20930.1 EES11600 AT3G11270.1 20706207
AT1G20930.1 EER97966 AT3G22310.1 20706207
AT1G20930.1 EES17375 AT3G22310.1 20706207
AT1G20930.1 KXG37587 AT4G14640.1 17360592
AT1G20930.1 KXG37588 AT4G14640.1 17360592
AT1G20930.1 EES02793 AT4G37490.1 20407024
AT1G20930.1 EES03772 AT4G37490.1 20407024
AT1G20930.1 EES18429 AT4G37490.1 20407024
AT1G20930.1 KXG24389 AT4G37490.1 20407024
AT1G20930.1 EES02793 AT5G06150.1 20407024
AT1G20930.1 EES03772 AT5G06150.1 20407024
AT1G20930.1 EES18429 AT5G06150.1 20407024
AT1G20930.1 KXG24389 AT5G06150.1 20407024
AT1G20930.1 EES02793 AT5G06150.1 20407024
AT1G20930.1 EES03772 AT5G06150.1 20407024
AT1G20930.1 EES18429 AT5G06150.1 20407024
AT1G20930.1 KXG24389 AT5G06150.1 20407024
AT1G20930.1 EES01631 AT5G21274.1 17360592
AT1G20930.1 EES09201 AT5G21274.1 17360592
AT1G20930.1 EES16322 AT5G21274.1 17360592
AT1G20930.1 OQU78227 AT5G21274.1 17360592
AT1G76540.1 KXG23504 AT1G15570.1 20407024
AT1G76540.1 OQU77084 AT1G15570.1 20407024
AT1G76540.1 KXG21616 AT1G44110.1 20407024
AT1G76540.1 OQU89443 AT1G70210.1 12857813
AT1G76540.1 EER90152 AT1G76540.1 20407024
AT1G76540.1 OQU80908 AT1G76540.1 20407024
AT1G76540.1 EER90152 AT1G76540.1 20407024
AT1G76540.1 OQU80908 AT1G76540.1 20407024
AT1G76540.1 KXG23504 AT1G80370.1 20407024
AT1G76540.1 OQU77084 AT1G80370.1 20407024
AT1G76540.1 EES12664 AT2G17620.1 12857813
AT1G76540.1 KXG20945 AT2G17620.1 12857813
AT1G76540.1 KXG40187 AT2G27960.1 11432958
AT1G76540.1 KXG40187 AT2G27960.1 12857813
AT1G76540.1 KXG40187 AT2G27960.1 20407024
AT1G76540.1 KXG40187 AT2G27960.1 20407024
AT1G76540.1 KXG40187 AT2G27970.1 20407024
AT1G76540.1 KXG40187 AT2G27970.1 20407024
AT1G76540.1 EER99015 AT3G19150.1 20407024
AT1G76540.1 EES04403 AT3G48750.1 10420643
AT1G76540.1 KXG40336 AT3G48750.1 10420643
AT1G76540.1 EER99528 AT4G03270.1 20407024
AT1G76540.1 EER96424 AT4G34160.1 12857813
AT1G76540.1 EES02793 AT4G37490.1 20407024
AT1G76540.1 EES03772 AT4G37490.1 20407024
AT1G76540.1 EES18429 AT4G37490.1 20407024
AT1G76540.1 KXG24389 AT4G37490.1 20407024
AT1G76540.1 EER91226 AT4G37630.1 20407024
AT1G76540.1 EER92677 AT4G37630.1 20407024
AT1G76540.1 EES17294 AT4G37630.1 20407024
AT1G76540.1 EES02793 AT5G06150.1 20407024
AT1G76540.1 EES03772 AT5G06150.1 20407024
AT1G76540.1 EES18429 AT5G06150.1 20407024
AT1G76540.1 KXG24389 AT5G06150.1 20407024
AT1G76540.1 EES02793 AT5G06150.1 20407024
AT1G76540.1 EES03772 AT5G06150.1 20407024
AT1G76540.1 EES18429 AT5G06150.1 20407024
AT1G76540.1 KXG24389 AT5G06150.1 20407024
AT1G76540.1 EES07560 AT5G10440.1 20407024
AT1G76540.1 KXG19603 AT5G10440.1 20407024
AT1G76540.1 EES07560 AT5G10440.1 20407024
AT1G76540.1 KXG19603 AT5G10440.1 20407024
AT1G76540.1 EER95303 AT5G43080.1 20407024
AT1G76540.1 EES16237 AT5G43080.1 20407024
AT1G76540.1 OQU91386 AT5G43080.1 20407024
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d031485_P001 Maize mitochondrion 72.75 93.31
EER90152 Sorghum cytosol, mitochondrion, peroxisome 69.91 90.77
TraesCS7D01G247700.1 Wheat cytosol 66.59 86.2
TraesCS7A01G248700.1 Wheat cytosol 66.59 86.2
TraesCS7B01G142600.1 Wheat cytosol 66.35 85.89
Os08t0512600-01 Rice cytosol, plasma membrane 66.11 85.58
GSMUA_Achr3P03700_001 Banana cytosol 58.77 82.12
HORVU7Hr1G051180.3 Barley cytosol 63.74 80.54
GSMUA_Achr9P12350_001 Banana cytosol 58.53 76.71
KRH37522 Soybean cytosol 56.87 75.71
KRH06014 Soybean cytosol 56.16 75.48
AT1G20930.1 Thale cress cytosol 55.92 74.92
Solyc04g082840.2.1 Tomato cytosol 55.69 74.6
PGSC0003DMT400025910 Potato cytosol 55.69 74.6
AT1G76540.1 Thale cress cytosol 54.98 74.12
VIT_18s0122g00550.t01 Wine grape cytosol 56.64 73.99
KRH48128 Soybean cytosol 55.21 73.97
Bra015735.1-P Field mustard cytosol 54.5 73.48
CDY01345 Canola cytosol 54.98 73.42
Bra012258.1-P Field mustard cytosol 54.98 73.42
CDY31856 Canola cytosol 54.98 73.42
GSMUA_Achr11P... Banana cytosol 58.06 73.35
CDX87588 Canola cytosol 54.27 73.16
CDX88294 Canola cytosol 54.03 72.84
KRH17547 Soybean cytosol 56.4 70.62
EES15619 Sorghum cytosol 45.73 62.66
KXG40336 Sorghum cytosol 38.39 55.1
EES04403 Sorghum cytosol 37.2 53.58
EES18176 Sorghum cytosol 30.09 29.67
OQU92050 Sorghum cytosol 30.33 27.18
KXG37128 Sorghum cytosol 25.36 24.88
EER87741 Sorghum cytosol 24.88 22.2
EES07406 Sorghum cytosol 23.93 22.15
EES12419 Sorghum nucleus 33.89 20.66
EES05381 Sorghum nucleus 32.7 20.44
Protein Annotations
Gene3D:1.10.510.10MapMan:13.1.1.2.2MapMan:18.4.3.1.2Gene3D:3.30.200.20UniProt:A0A1Z5RAX5GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:Kinase-like_dom_sfEnsemblPlants:OQU80908ProteinID:OQU80908
ProteinID:OQU80908.1PFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24056
PANTHER:PTHR24056:SF178InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3007G207700SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASUniParc:UPI000B8BA7F7SEG:seg:::
Description
hypothetical protein
Coordinates
chr7:-:63707364..63709522
Molecular Weight (calculated)
47498.0 Da
IEP (calculated)
10.232
GRAVY (calculated)
-0.435
Length
422 amino acids
Sequence
(BLAST)
001: MKAKPRPSPR VSVPPPKSWA IPSKFVISKR IRWSACASPQ TALLPPHPLP PAYKSSPKSQ TLLHPHPPRT HPSSDAISDD LPKSAARARE GEGRIRPMAT
101: MQHQAAAAPP STTTGGGQRA MDLYEKLEKV GEGTYGKVYR AREKATGRIV ALKKTRLPED DEGVPPTAMR EVSLLRMLSQ DPHVVRLLDL KQGVNKEGQT
201: ILYLVFEYMD TDLKKFIRGH RNNREKIPEA TVKILMYQLC KGVAFVHGRG VLHRDLKPHN LLMDRKTMAL KIADLGLSRA ITVPIKKYTH EILTLWYRAP
301: EILLGATHYS TPVDIWSVGC IFAELVTNQP LFPGDSELQQ LLHIFKLLGT PNEEVWPGVD KLPNWHVYPQ WKPTKLSTLV PGLDADGYDL LEKMLVFEPG
401: KRIPAKKALE HPYFNDVRKE MH
Best Arabidopsis Sequence Match ( AT1G20930.1 )
(BLAST)
001: MDNNGVKPAV SAMEAFEKLE KVGEGTYGKV YRAREKATGM IVALKKTRLH EDEEGVPPTT LREISILRML ARDPHIVRLM DVKQGINKEG KTVLYLVFEY
101: VDTDLKKFIR SFRQAGQNIP QNTVKCLMYQ LCKGMAFCHG HGVLHRDLKP HNLLMDRKTM TLKIADLGLA RAFTLPMKKY THEILTLWYR APEVLLGATH
201: YSTGVDMWSV GCIFAELVTK QAIFAGDSEL QQLLRIFRLL GTPNEEVWPG VSKLKDWHEY PQWKPLSLST AVPNLDEAGL DLLSKMLEYE PAKRISAKKA
301: MEHPYFDDLP DKSSL
Arabidopsis Description
CDKB2-2Cyclin-dependent kinase B2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG64]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.