Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d013744_P001 | Maize | nucleus | 86.21 | 63.03 |
| KRH52056 | Soybean | nucleus | 49.81 | 61.61 |
| GSMUA_Achr10P... | Banana | nucleus | 69.73 | 57.41 |
| TraesCS4D01G076900.1 | Wheat | nucleus | 79.69 | 56.22 |
| TraesCS4B01G078300.1 | Wheat | nucleus | 78.93 | 55.53 |
| HORVU4Hr1G013320.1 | Barley | nucleus | 79.31 | 55.5 |
| TraesCS4A01G236700.2 | Wheat | plastid | 79.69 | 55.47 |
| CDY06752 | Canola | nucleus | 60.54 | 55.44 |
| VIT_18s0001g09580.t01 | Wine grape | nucleus, plastid | 69.35 | 49.59 |
| GSMUA_Achr6P11130_001 | Banana | nucleus | 69.73 | 46.55 |
| PGSC0003DMT400055428 | Potato | nucleus | 65.52 | 46.47 |
| Solyc04g078310.2.1 | Tomato | nucleus | 65.52 | 46.09 |
| KRH61375 | Soybean | nucleus | 57.47 | 45.87 |
| PGSC0003DMT400030176 | Potato | nucleus | 62.45 | 45.79 |
| CDY22369 | Canola | nucleus | 61.3 | 45.58 |
| Solyc12g088530.1.1 | Tomato | nucleus | 61.69 | 45.48 |
| PGSC0003DMT400030222 | Potato | nucleus | 61.69 | 45.48 |
| VIT_03s0091g00280.t01 | Wine grape | nucleus | 59.0 | 45.16 |
| AT5G43080.1 | Thale cress | nucleus | 60.92 | 44.79 |
| KRH15427 | Soybean | nucleus, plastid | 62.45 | 44.78 |
| CDY17091 | Canola | nucleus | 61.3 | 44.69 |
| Bra033658.1-P | Field mustard | nucleus | 60.92 | 44.66 |
| AT1G47220.1 | Thale cress | nucleus | 55.94 | 44.65 |
| Solyc12g088500.1.1 | Tomato | nucleus | 60.15 | 44.35 |
| Solyc12g088520.1.1 | Tomato | nucleus | 60.15 | 44.23 |
| EES16237 | Sorghum | nucleus, plastid | 72.03 | 43.93 |
| Solyc12g088470.1.1 | Tomato | nucleus | 60.54 | 43.89 |
| KRH05614 | Soybean | nucleus | 61.69 | 43.87 |
| CDY17037 | Canola | nucleus, plastid | 60.54 | 43.41 |
| Bra040792.1-P | Field mustard | nucleus, plastid | 59.77 | 42.86 |
| KRH52055 | Soybean | nucleus | 58.62 | 42.74 |
| KRH61371 | Soybean | nucleus | 57.09 | 42.69 |
| Bra040710.1-P | Field mustard | nucleus | 60.15 | 42.32 |
| KRH61369 | Soybean | nucleus | 52.87 | 42.2 |
| AT1G47230.2 | Thale cress | nucleus, plastid | 59.77 | 42.16 |
| CDY47595 | Canola | nucleus, plastid | 59.39 | 41.78 |
| Bra032220.1-P | Field mustard | nucleus | 56.7 | 41.46 |
| CDY66770 | Canola | nucleus | 57.47 | 41.44 |
| CDY23653 | Canola | nucleus | 56.32 | 41.18 |
| Bra040753.1-P | Field mustard | nucleus, plastid | 56.7 | 40.77 |
| CDY06757 | Canola | nucleus, plastid | 56.7 | 40.77 |
| PGSC0003DMT400056625 | Potato | nucleus | 59.0 | 40.53 |
| Bra040793.1-P | Field mustard | nucleus | 55.94 | 40.22 |
| CDY47596 | Canola | nucleus | 55.94 | 40.22 |
| Solyc10g049360.1.1 | Tomato | nucleus | 57.85 | 39.95 |
| CDY17039 | Canola | nucleus | 55.56 | 39.94 |
| AT1G47210.2 | Thale cress | nucleus | 56.7 | 39.78 |
| KRH61373 | Soybean | nucleus, plastid | 57.09 | 39.73 |
| EER95303 | Sorghum | nucleus, plastid | 50.96 | 34.91 |
| Os03t0607600-00 | Rice | nucleus | 79.69 | 34.21 |
| KXG24389 | Sorghum | nucleus | 30.27 | 31.35 |
| OQU77084 | Sorghum | nucleus | 55.94 | 29.92 |
| KXG21616 | Sorghum | nucleus, plastid | 51.72 | 28.18 |
| KXG23504 | Sorghum | mitochondrion, nucleus | 48.28 | 26.09 |
| EES03772 | Sorghum | nucleus, plastid | 38.31 | 22.27 |
| EES12664 | Sorghum | nucleus | 34.48 | 20.83 |
| KXG20945 | Sorghum | nucleus | 33.72 | 20.75 |
| EES18429 | Sorghum | mitochondrion | 34.1 | 19.35 |
| EES02793 | Sorghum | nucleus | 32.95 | 18.57 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.1 | UniProt:A0A1Z5S6F1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom |
| InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlants:OQU91386 |
| ProteinID:OQU91386 | ProteinID:OQU91386.1 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 |
| PANTHER:PTHR10177 | PANTHER:PTHR10177:SF345 | SMART:SM00385 | SMART:SM01332 | EnsemblPlantsGene:SORBI_3001G169800 | SUPFAM:SSF47954 |
| UniParc:UPI000B8B9F16 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:14160148..14161985
Molecular Weight (calculated)
29887.4 Da
IEP (calculated)
8.427
GRAVY (calculated)
-0.143
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MESQPKRRPA ADYIAAVQVD VTPNMRAILV DWLVEVAEEY KLVSDTLYLT VSYVDRFLSA NALNRQRLQL LGVCAMLVAS KYEEISPPNV EDFCYITDNT
101: YTKQEVVKME SDILNVLKFE VGNPTPKTFL RMFIRSAQED NNKCPSLQLE FLGNYLCELS LLDYSLLRFL PSLVAASVVF VARLTLDPHT NPWSKKMQTL
201: TGYKPSELKD CVAAIHHMQL NRKYSSMMAI REKYKQHKFK GVSALLPPVE IPASYFKKLK E
101: YTKQEVVKME SDILNVLKFE VGNPTPKTFL RMFIRSAQED NNKCPSLQLE FLGNYLCELS LLDYSLLRFL PSLVAASVVF VARLTLDPHT NPWSKKMQTL
201: TGYKPSELKD CVAAIHHMQL NRKYSSMMAI REKYKQHKFK GVSALLPPVE IPASYFKKLK E
001: MADEKENCVR MTRAATKRKA SMEAAIDKER INKKRVVLGE LPNLSNIKKS RKATTKQKKK SVSIPTIETL NSDIDTRSDD PQMCGPYVTS IFEYLRQLEV
101: KSRPLVDYIE KIQKDVTSNM RGVLVDWLVE VAEEYKLLSD TLYLAVSYID RFLSLKTVNK QRLQLLGVTS MLIASKYEEI TPPNVDDFCY ITDNTYTKQE
201: IVKMEADILL ALQFELGNPT SNTFLRRFTR VAQEDFEMSH LQMEFLCSYL SELSMLDYQS VKFLPSTVAA SAVFLARFII RPKQHPWNVM LEEYTRYKAG
301: DLKECVAMIH DLYLSRKCGA LEAIREKYKQ HKFKCVATMP VSPELPLTVF EDVNI
101: KSRPLVDYIE KIQKDVTSNM RGVLVDWLVE VAEEYKLLSD TLYLAVSYID RFLSLKTVNK QRLQLLGVTS MLIASKYEEI TPPNVDDFCY ITDNTYTKQE
201: IVKMEADILL ALQFELGNPT SNTFLRRFTR VAQEDFEMSH LQMEFLCSYL SELSMLDYQS VKFLPSTVAA SAVFLARFII RPKQHPWNVM LEEYTRYKAG
301: DLKECVAMIH DLYLSRKCGA LEAIREKYKQ HKFKCVATMP VSPELPLTVF EDVNI
Arabidopsis Description
CYCA3-1Putative cyclin-A3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMH5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.