Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU91386 | Sorghum | nucleus | 45.16 | 59.0 |
| VIT_18s0001g09580.t01 | Wine grape | nucleus, plastid | 58.36 | 54.52 |
| GSMUA_Achr10P... | Banana | nucleus | 48.09 | 51.73 |
| PGSC0003DMT400056625 | Potato | nucleus | 55.13 | 49.47 |
| Solyc10g049360.1.1 | Tomato | nucleus | 54.84 | 49.47 |
| GSMUA_Achr2P21530_001 | Banana | cytosol, nucleus, plastid | 40.47 | 48.25 |
| TraesCS4D01G076900.1 | Wheat | nucleus | 50.73 | 46.76 |
| TraesCS4B01G078300.1 | Wheat | nucleus | 50.73 | 46.63 |
| HORVU4Hr1G013320.1 | Barley | nucleus | 50.73 | 46.38 |
| TraesCS4A01G236700.2 | Wheat | plastid | 50.73 | 46.13 |
| GSMUA_Achr6P11130_001 | Banana | nucleus | 52.49 | 45.78 |
| Zm00001d033365_P002 | Maize | nucleus | 49.85 | 45.7 |
| Zm00001d013744_P001 | Maize | nucleus | 47.8 | 45.66 |
| TraesCS5B01G078200.1 | Wheat | plastid | 49.85 | 45.09 |
| TraesCS5D01G084700.1 | Wheat | nucleus | 49.85 | 44.97 |
| TraesCS5A01G072000.1 | Wheat | plastid | 49.56 | 44.95 |
| TraesCS4D01G253200.1 | Wheat | nucleus | 30.5 | 42.62 |
| Os12t0581800-01 | Rice | nucleus, plastid | 48.09 | 42.6 |
| GSMUA_Achr2P21520_001 | Banana | nucleus | 44.28 | 41.94 |
| Zm00001d030849_P001 | Maize | nucleus | 50.73 | 40.9 |
| EES16237 | Sorghum | nucleus, plastid | 51.03 | 40.65 |
| Zm00001d041334_P001 | Maize | nucleus, plastid | 51.32 | 40.05 |
| HORVU5Hr1G018820.2 | Barley | nucleus, plastid | 49.56 | 37.22 |
| VIT_18s0001g02080.t01 | Wine grape | nucleus, plastid | 39.59 | 36.49 |
| TraesCS4B01G254000.1 | Wheat | nucleus | 39.3 | 35.64 |
| TraesCS4A01G051300.1 | Wheat | nucleus | 35.48 | 35.28 |
| TraesCS4B01G253100.1 | Wheat | nucleus | 34.6 | 34.6 |
| TraesCS4D01G253900.1 | Wheat | nucleus | 38.12 | 34.21 |
| TraesCS4A01G050700.1 | Wheat | nucleus | 38.12 | 34.21 |
| VIT_04s0008g04260.t01 | Wine grape | nucleus, plastid | 39.88 | 33.92 |
| EER95303 | Sorghum | nucleus, plastid | 37.54 | 33.6 |
| HORVU4Hr1G069310.3 | Barley | nucleus | 39.59 | 32.53 |
| VIT_09s0002g05240.t01 | Wine grape | nucleus | 42.82 | 29.8 |
| VIT_18s0001g02060.t01 | Wine grape | plastid | 43.11 | 29.7 |
| Os03t0607600-00 | Rice | nucleus | 47.8 | 26.81 |
| Os03t0208700-00 | Rice | nucleus | 31.67 | 26.41 |
| Zm00001d048127_P001 | Maize | plastid | 34.9 | 24.84 |
| VIT_06s0009g02090.t01 | Wine grape | nucleus | 30.21 | 24.64 |
| VIT_18s0001g14170.t01 | Wine grape | nucleus | 29.62 | 22.9 |
| VIT_13s0067g01420.t01 | Wine grape | nucleus | 30.21 | 22.29 |
| VIT_08s0040g00930.t01 | Wine grape | nucleus | 29.33 | 22.08 |
| VIT_03s0038g02800.t01 | Wine grape | nucleus, plastid | 26.69 | 21.46 |
| VIT_19s0085g00690.t01 | Wine grape | nucleus | 26.98 | 15.23 |
| Os03t0208800-00 | Rice | nucleus | 15.84 | 13.6 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.1 | ProteinID:CBI22505 | ProteinID:CBI22505.3 | InterPro:Cyclin-A_plant | InterPro:Cyclin-like |
| InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | UniProt:D7SXV5 | EMBL:FN595242 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF270 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI0001BE1F55 | ArrayExpress:VIT_03s0091g00280 | EnsemblPlantsGene:VIT_03s0091g00280 | EnsemblPlants:VIT_03s0091g00280.t01 | : | : |
Description
No Description!
Coordinates
chr3:-:6566136..6569256
Molecular Weight (calculated)
39431.5 Da
IEP (calculated)
7.865
GRAVY (calculated)
-0.359
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEQDNCVHT PGAFRKRASD ECPQSTTTKK RVVLEDITNS PNNELIQNSD RESQKPKRGI RRTGGCSSIM YQHLHALEME EKRRARPDYM EKVQNDVTPN
101: MREILVDWLV EVAEEYKLVS DTLFLCISYI DRFLSSHALR RDKLQLLGVS CMLIASKFEE ISPPHAEDFC YITDNHYTAE EVVNMERDVL KFLNFEKVAP
201: TTKVFLRQEH SQCFSIIKHG KTAICFTFEA LSWYLAELSL LDYGCLQFLP SMIAASSIFL ARFTLEPNKH PWSLALQRYS GYKPSELKEC VLLIHSRQLN
301: RRGNSSLRAI RQKYLQPMFK CVAAHVSLPE IPKHCFEAIK E
101: MREILVDWLV EVAEEYKLVS DTLFLCISYI DRFLSSHALR RDKLQLLGVS CMLIASKFEE ISPPHAEDFC YITDNHYTAE EVVNMERDVL KFLNFEKVAP
201: TTKVFLRQEH SQCFSIIKHG KTAICFTFEA LSWYLAELSL LDYGCLQFLP SMIAASSIFL ARFTLEPNKH PWSLALQRYS GYKPSELKEC VLLIHSRQLN
301: RRGNSSLRAI RQKYLQPMFK CVAAHVSLPE IPKHCFEAIK E
001: MAENQNCARM TRAAAKRKAS SMALDENPVS KKRVVLGELP NMSNVVAVPN QERETLKAKT SVNTSKRQMK KALMIPEASV LIESRSVDPQ MCEPFASDIC
101: AYLREMEGKP KHRPLPDYIE KVQSDLTPHM RAVLVDWLVE VAEEYKLVSD TLYLTISYVD RFLSVKPINR QKLQLVGVSA MLIASKYEEI GPPKVEDFCY
201: ITDNTFTKQE VVSMEADILL ALQFELGSPT IKTFLRRFTR VAQEDFKDSQ LQIEFLCCYL SELSMLDYTC VKYLPSLLSA SAVFLARFII RPKQHPWNQM
301: LEEYTKYKAA DLQVCVGIIH DLYLSRRGNT LEAVRNKYKQ HKYKCVATMP VSPELPLAFF EDITIRGMA
101: AYLREMEGKP KHRPLPDYIE KVQSDLTPHM RAVLVDWLVE VAEEYKLVSD TLYLTISYVD RFLSVKPINR QKLQLVGVSA MLIASKYEEI GPPKVEDFCY
201: ITDNTFTKQE VVSMEADILL ALQFELGSPT IKTFLRRFTR VAQEDFKDSQ LQIEFLCCYL SELSMLDYTC VKYLPSLLSA SAVFLARFII RPKQHPWNQM
301: LEEYTKYKAA DLQVCVGIIH DLYLSRRGNT LEAVRNKYKQ HKYKCVATMP VSPELPLAFF EDITIRGMA
Arabidopsis Description
CYCA3-4Cyclin-A3-4 [Source:UniProtKB/Swiss-Prot;Acc:Q3ECW2]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.