Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400056625 | Potato | nucleus | 96.56 | 96.05 |
| OQU91386 | Sorghum | nucleus | 39.95 | 57.85 |
| VIT_03s0091g00280.t01 | Wine grape | nucleus | 49.47 | 54.84 |
| Solyc12g088500.1.1 | Tomato | nucleus | 49.74 | 53.11 |
| Solyc12g088530.1.1 | Tomato | nucleus | 49.47 | 52.82 |
| Solyc12g088520.1.1 | Tomato | nucleus | 49.47 | 52.68 |
| Solyc12g088470.1.1 | Tomato | nucleus | 49.47 | 51.94 |
| Solyc04g078310.2.1 | Tomato | nucleus | 50.53 | 51.48 |
| GSMUA_Achr2P21530_001 | Banana | cytosol, nucleus, plastid | 38.1 | 50.35 |
| TraesCS4B01G078300.1 | Wheat | nucleus | 48.68 | 49.6 |
| GSMUA_Achr10P... | Banana | nucleus | 41.53 | 49.53 |
| TraesCS4D01G076900.1 | Wheat | nucleus | 48.41 | 49.46 |
| HORVU4Hr1G013320.1 | Barley | nucleus | 48.68 | 49.33 |
| TraesCS4A01G236700.2 | Wheat | plastid | 48.15 | 48.53 |
| GSMUA_Achr6P11130_001 | Banana | nucleus | 48.68 | 47.06 |
| Zm00001d033365_P002 | Maize | nucleus | 46.3 | 47.04 |
| TraesCS5B01G078200.1 | Wheat | plastid | 45.77 | 45.89 |
| TraesCS5D01G084700.1 | Wheat | nucleus | 45.5 | 45.5 |
| TraesCS5A01G072000.1 | Wheat | plastid | 45.24 | 45.48 |
| Zm00001d013744_P001 | Maize | nucleus | 42.59 | 45.1 |
| GSMUA_Achr2P21520_001 | Banana | nucleus | 42.86 | 45.0 |
| TraesCS4D01G253200.1 | Wheat | nucleus | 28.57 | 44.26 |
| Os12t0581800-01 | Rice | nucleus, plastid | 44.71 | 43.9 |
| Zm00001d030849_P001 | Maize | nucleus | 45.77 | 40.9 |
| EES16237 | Sorghum | nucleus, plastid | 46.3 | 40.89 |
| Zm00001d041334_P001 | Maize | nucleus, plastid | 44.71 | 38.67 |
| TraesCS4B01G254000.1 | Wheat | nucleus | 37.83 | 38.03 |
| EER95303 | Sorghum | nucleus, plastid | 38.1 | 37.8 |
| HORVU5Hr1G018820.2 | Barley | nucleus, plastid | 44.97 | 37.44 |
| TraesCS4D01G253900.1 | Wheat | nucleus | 37.04 | 36.84 |
| TraesCS4A01G050700.1 | Wheat | nucleus | 37.04 | 36.84 |
| TraesCS4B01G253100.1 | Wheat | nucleus | 32.8 | 36.36 |
| TraesCS4A01G051300.1 | Wheat | nucleus | 32.8 | 36.15 |
| HORVU4Hr1G069310.3 | Barley | nucleus | 38.36 | 34.94 |
| Solyc06g065680.2.1 | Tomato | nucleus, plastid | 40.74 | 32.42 |
| Solyc03g120440.1.1 | Tomato | nucleus, plastid | 38.62 | 31.88 |
| Solyc11g005090.1.1 | Tomato | plastid | 40.21 | 31.02 |
| Os03t0208700-00 | Rice | nucleus | 31.22 | 28.85 |
| Zm00001d048127_P001 | Maize | plastid | 35.71 | 28.18 |
| Solyc02g061650.1.1 | Tomato | nucleus | 24.6 | 26.5 |
| Os03t0607600-00 | Rice | nucleus | 42.06 | 26.15 |
| Solyc12g094600.1.1 | Tomato | nucleus | 27.78 | 24.71 |
| Solyc04g082430.2.1 | Tomato | nucleus | 25.4 | 24.43 |
| Solyc03g032190.2.1 | Tomato | nucleus | 27.51 | 24.13 |
| Solyc02g082820.2.1 | Tomato | nucleus | 27.25 | 23.73 |
| Solyc01g009040.2.1 | Tomato | nucleus | 27.25 | 23.68 |
| Solyc10g078330.1.1 | Tomato | nucleus | 26.45 | 23.64 |
| Solyc06g073610.2.1 | Tomato | nucleus | 27.25 | 23.41 |
| Solyc10g080950.1.1 | Tomato | nucleus | 25.66 | 21.0 |
| Os03t0208800-00 | Rice | nucleus | 15.08 | 14.36 |
| Solyc07g066660.2.1 | Tomato | nucleus | 25.93 | 13.26 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.1 | InterPro:Cyclin-A_plant | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom |
| InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | UniProt:K4D093 |
| PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF270 |
| SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | EnsemblPlantsGene:Solyc10g049360.1 | EnsemblPlants:Solyc10g049360.1.1 | UniParc:UPI000276A077 |
Description
No Description!
Coordinates
chr10:-:45242780..45248999
Molecular Weight (calculated)
43054.7 Da
IEP (calculated)
5.484
GRAVY (calculated)
-0.180
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDEENKVPA TAAASRGSNK RAFDSIAITN ENDPLQISER PYPANKKRVV LGELNNLGNV IVSTQNSDLT ETHESKRKIK LRKTRNVVKE TVELETSANS
101: SPKDNLQKCS YGPLIYQHLH SLEVEERRRP LSNYMEKVQN NVIPSMRTVL VDWLVEVTEE YKLVSDTLYL AVSYIDRFLS SHVLAMEKLQ LLGVSCMLVA
201: SKYEEISPPH VEDFCYITDN TYTREEVVNM ERDLLSFLNF EISSPTTITF LRIFLKAAQD NLSFLTLQFE FLSCYLAELS LLDYSCVRFL PSMTAASAIF
301: LSRFTVLPEV CPWTLALQQC TGYKPSELKD CVLVIHELQS SLMEATGRAL REKYMNHKYK CVAALHPPDI PSCFFDDA
101: SPKDNLQKCS YGPLIYQHLH SLEVEERRRP LSNYMEKVQN NVIPSMRTVL VDWLVEVTEE YKLVSDTLYL AVSYIDRFLS SHVLAMEKLQ LLGVSCMLVA
201: SKYEEISPPH VEDFCYITDN TYTREEVVNM ERDLLSFLNF EISSPTTITF LRIFLKAAQD NLSFLTLQFE FLSCYLAELS LLDYSCVRFL PSMTAASAIF
301: LSRFTVLPEV CPWTLALQQC TGYKPSELKD CVLVIHELQS SLMEATGRAL REKYMNHKYK CVAALHPPDI PSCFFDDA
001: MTEQEICVRV TRAAAKRKAS TAMGIDGDRV NKKRVVLGEL LNVSNVNLLA NLNQKKETQK PKRNLKPPPA KQIKSAPVAI IDLESKSDID SRSDDPQMCG
101: PYVADIYEYL RQLEVKPKQR PLPDYIEKVQ KDVTPSMRGV LVDWLVEVAE EYKLGSETLY LTVSHIDRFL SLKTVNKQKL QLVGVSAMLI ASKYEEISPP
201: KVDDFCYITD NTFSKQDVVK MEADILLALQ FELGRPTINT FMRRFTRVAQ DDFKVPHLQL EPLCCYLSEL SILDYKTVKF VPSLLAASAV FLARFIIRPK
301: QHPWNQMLEE YTKYKAADLQ VCVGIIHDLY LSRRGGALQA VREKYKHHKF QCVATMPVSP ELPVTFWEDV TI
101: PYVADIYEYL RQLEVKPKQR PLPDYIEKVQ KDVTPSMRGV LVDWLVEVAE EYKLGSETLY LTVSHIDRFL SLKTVNKQKL QLVGVSAMLI ASKYEEISPP
201: KVDDFCYITD NTFSKQDVVK MEADILLALQ FELGRPTINT FMRRFTRVAQ DDFKVPHLQL EPLCCYLSEL SILDYKTVKF VPSLLAASAV FLARFIIRPK
301: QHPWNQMLEE YTKYKAADLQ VCVGIIHDLY LSRRGGALQA VREKYKHHKF QCVATMPVSP ELPVTFWEDV TI
Arabidopsis Description
CYCA3-2Cyclin-A3-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6A9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.