Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400058457 | Potato | nucleus | 91.49 | 95.22 |
| VIT_06s0009g02090.t01 | Wine grape | nucleus | 62.3 | 64.83 |
| Solyc06g073610.2.1 | Tomato | nucleus | 64.37 | 63.64 |
| TraesCSU01G217300.1 | Wheat | cytosol | 28.97 | 58.33 |
| Solyc10g078330.1.1 | Tomato | nucleus | 56.32 | 57.92 |
| HORVU0Hr1G001680.1 | Barley | nucleus | 42.3 | 57.5 |
| KRH14611 | Soybean | nucleus | 57.24 | 56.72 |
| KRH73516 | Soybean | nucleus | 56.09 | 55.45 |
| GSMUA_Achr7P21380_001 | Banana | nucleus | 57.47 | 54.7 |
| Zm00001d019469_P001 | Maize | extracellular | 17.93 | 54.55 |
| HORVU1Hr1G068080.1 | Barley | plastid | 42.76 | 54.39 |
| GSMUA_Achr4P10090_001 | Banana | nucleus | 52.87 | 54.12 |
| Solyc10g080950.1.1 | Tomato | nucleus | 57.47 | 54.11 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.09 | 52.68 |
| EES03772 | Sorghum | nucleus, plastid | 54.25 | 52.56 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 48.05 | 51.99 |
| KXG24389 | Sorghum | nucleus | 30.11 | 51.98 |
| HORVU1Hr1G068010.7 | Barley | mitochondrion, nucleus | 50.11 | 51.9 |
| Zm00001d012560_P002 | Maize | nucleus, plastid | 53.33 | 51.67 |
| GSMUA_Achr10P... | Banana | nucleus | 53.79 | 51.66 |
| TraesCS1D01G309300.1 | Wheat | nucleus, plastid | 51.03 | 50.92 |
| HORVU3Hr1G078880.2 | Barley | nucleus | 52.87 | 50.77 |
| TraesCS1B01G320900.1 | Wheat | nucleus, plastid | 50.8 | 50.69 |
| TraesCS3D01G326600.1 | Wheat | nucleus | 52.87 | 50.55 |
| HORVU0Hr1G001690.16 | Barley | nucleus, peroxisome | 50.8 | 50.46 |
| TraesCS3B01G363200.3 | Wheat | nucleus | 53.33 | 50.33 |
| TraesCS3A01G333000.2 | Wheat | nucleus | 52.87 | 50.0 |
| TraesCS1A01G309800.1 | Wheat | nucleus | 50.11 | 50.0 |
| TraesCS1D01G309400.1 | Wheat | nucleus | 50.11 | 49.89 |
| HORVU0Hr1G026010.1 | Barley | nucleus, plastid | 50.57 | 49.66 |
| HORVU1Hr1G068160.2 | Barley | nucleus, plastid | 50.57 | 49.66 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 49.66 | 49.66 |
| TraesCS1B01G321000.1 | Wheat | nucleus | 49.43 | 49.31 |
| Zm00001d043164_P002 | Maize | nucleus | 53.1 | 47.73 |
| Zm00001d010656_P001 | Maize | nucleus | 47.82 | 46.64 |
| Os01t0281200-01 | Rice | nucleus | 43.91 | 45.15 |
| EES18429 | Sorghum | mitochondrion | 47.13 | 44.57 |
| TraesCS3D01G195200.1 | Wheat | plastid | 41.38 | 43.58 |
| TraesCS3A01G192100.1 | Wheat | nucleus, plastid | 40.92 | 43.0 |
| Os05t0493500-00 | Rice | nucleus | 47.82 | 42.71 |
| TraesCS7A01G229300.1 | Wheat | endoplasmic reticulum | 31.95 | 42.25 |
| EES02793 | Sorghum | nucleus | 42.53 | 39.96 |
| Os02t0627800-00 | Rice | cytosol, mitochondrion, peroxisome | 35.17 | 38.64 |
| Zm00001d008221_P001 | Maize | nucleus | 42.3 | 38.41 |
| Solyc04g082430.2.1 | Tomato | nucleus | 32.87 | 36.39 |
| Solyc12g094600.1.1 | Tomato | nucleus | 35.4 | 36.24 |
| HORVU3Hr1G040990.2 | Barley | nucleus, plastid | 40.69 | 35.98 |
| Solyc03g032190.2.1 | Tomato | nucleus | 35.17 | 35.5 |
| Solyc02g061650.1.1 | Tomato | nucleus | 28.28 | 35.04 |
| Solyc02g082820.2.1 | Tomato | nucleus | 34.71 | 34.79 |
| Zm00001d020033_P001 | Maize | nucleus | 41.61 | 33.27 |
| Zm00001d020996_P001 | Maize | nucleus | 40.46 | 32.35 |
| Solyc12g088530.1.1 | Tomato | nucleus | 24.14 | 29.66 |
| Solyc04g078310.2.1 | Tomato | nucleus | 25.29 | 29.65 |
| Solyc12g088470.1.1 | Tomato | nucleus | 23.91 | 28.89 |
| Solyc12g088500.1.1 | Tomato | nucleus | 23.45 | 28.81 |
| Solyc12g088520.1.1 | Tomato | nucleus | 22.99 | 28.17 |
| Solyc10g049360.1.1 | Tomato | nucleus | 23.68 | 27.25 |
| Solyc11g005090.1.1 | Tomato | plastid | 27.59 | 24.49 |
| Solyc06g065680.2.1 | Tomato | nucleus, plastid | 26.67 | 24.42 |
| Solyc03g120440.1.1 | Tomato | nucleus, plastid | 24.83 | 23.58 |
| Solyc07g066660.2.1 | Tomato | nucleus | 32.41 | 19.08 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | UniProt:K4ATA0 | PFAM:PF00134 |
| PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF267 | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | EnsemblPlantsGene:Solyc01g009040.2 | EnsemblPlants:Solyc01g009040.2.1 | UniParc:UPI0002763331 | SEG:seg |
Description
No Description!
Coordinates
chr1:+:3041736..3044740
Molecular Weight (calculated)
48515.5 Da
IEP (calculated)
9.293
GRAVY (calculated)
-0.335
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHHNKAVVP HNLPRGGDMG GKQKIGQVAG KNRRVLGDIG NLVIAPAVEG KPKTQVTRPA TRSFCAQLLA NAQAEKNKKP LAEVVNKVAT TKVQVKKKAS
101: DNLAPETVIV ISPDKEVKQS PLSSRRKTKK SGKTLTSTLT ARSKAACGVA NRPKIDDIDA ADVDNHLAAV EYVEDIYNFY KLTEDEGRVN DYMDFQPELN
201: HKMRAILVDW LIEVHRKFEL MPESLYLTMN ILDRFLSVKT VPRRELQLVG ISSMLIACKY EEIWAPEVND FIHISDNAYA RDQILQMEKA ILGKLEWYLT
301: VPTPYVFLVR YIKASTPNDQ EMENMAFFFA ELGLMNYKTI ITSCPSMLAA SSVYAARCTL NKSPLWTQTL QHHTGYSEDQ LMESGKELVS CHLGAAENKL
401: KAIYRKFSSP DRGAVALFPP AKNLSPTNAN TTTSS
101: DNLAPETVIV ISPDKEVKQS PLSSRRKTKK SGKTLTSTLT ARSKAACGVA NRPKIDDIDA ADVDNHLAAV EYVEDIYNFY KLTEDEGRVN DYMDFQPELN
201: HKMRAILVDW LIEVHRKFEL MPESLYLTMN ILDRFLSVKT VPRRELQLVG ISSMLIACKY EEIWAPEVND FIHISDNAYA RDQILQMEKA ILGKLEWYLT
301: VPTPYVFLVR YIKASTPNDQ EMENMAFFFA ELGLMNYKTI ITSCPSMLAA SSVYAARCTL NKSPLWTQTL QHHTGYSEDQ LMESGKELVS CHLGAAENKL
401: KAIYRKFSSP DRGAVALFPP AKNLSPTNAN TTTSS
001: MATRANVPEQ VRGAPLVDGL KIQNKNGAVK SRRALGDIGN LVSVPGVQGG KAQPPINRPI TRSFRAQLLA NAQLERKPIN GDNKVPALGP KRQPLAARNP
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS
Arabidopsis Description
CYCB1-2Cyclin-B1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39067]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.