Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03772 | Sorghum | nucleus, plastid | 84.09 | 90.65 |
| Zm00001d012560_P002 | Maize | nucleus, plastid | 81.2 | 87.53 |
| KXG24389 | Sorghum | nucleus | 38.64 | 74.21 |
| HORVU3Hr1G078880.2 | Barley | nucleus | 61.78 | 66.0 |
| TraesCS3D01G326600.1 | Wheat | nucleus | 61.98 | 65.93 |
| TraesCS3B01G363200.3 | Wheat | nucleus | 62.19 | 65.29 |
| TraesCSU01G217300.1 | Wheat | cytosol | 29.13 | 65.28 |
| TraesCS3A01G333000.2 | Wheat | nucleus | 61.78 | 65.0 |
| Zm00001d019469_P001 | Maize | extracellular | 16.94 | 57.34 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.26 | 54.03 |
| PGSC0003DMT400058457 | Potato | nucleus | 46.28 | 53.59 |
| Zm00001d010656_P001 | Maize | nucleus | 48.97 | 53.14 |
| Solyc01g009040.2.1 | Tomato | nucleus | 47.73 | 53.1 |
| PGSC0003DMT400018480 | Potato | nucleus | 45.66 | 52.0 |
| Solyc10g078330.1.1 | Tomato | nucleus | 45.04 | 51.54 |
| VIT_08s0040g00930.t01 | Wine grape | nucleus | 48.14 | 51.43 |
| Bra028741.1-P | Field mustard | nucleus | 44.01 | 51.33 |
| PGSC0003DMT400015245 | Potato | nucleus | 46.28 | 51.03 |
| VIT_06s0009g02090.t01 | Wine grape | nucleus | 43.8 | 50.72 |
| Solyc10g080950.1.1 | Tomato | nucleus | 47.93 | 50.22 |
| KRG95055 | Soybean | nucleus | 46.9 | 49.89 |
| AT2G26760.1 | Thale cress | nucleus | 39.88 | 49.87 |
| PGSC0003DMT400072211 | Potato | nucleus | 47.73 | 49.78 |
| KRH66720 | Soybean | endoplasmic reticulum, vacuole | 20.45 | 49.75 |
| KRH14611 | Soybean | nucleus | 45.04 | 49.66 |
| Solyc06g073610.2.1 | Tomato | nucleus | 45.04 | 49.55 |
| Bra005880.1-P | Field mustard | nucleus, plastid | 42.36 | 49.52 |
| Bra002046.1-P | Field mustard | nucleus | 40.08 | 49.36 |
| CDY69551 | Canola | nucleus | 36.16 | 49.3 |
| KRH66715 | Soybean | nucleus | 39.67 | 48.98 |
| KRH73516 | Soybean | nucleus | 44.42 | 48.86 |
| AT3G11520.1 | Thale cress | nucleus | 41.74 | 48.79 |
| VIT_13s0067g01420.t01 | Wine grape | nucleus | 46.49 | 48.7 |
| KRH66713 | Soybean | nucleus | 45.66 | 48.68 |
| CDY11354 | Canola | plastid | 43.39 | 48.5 |
| CDY62475 | Canola | nucleus | 35.12 | 48.43 |
| CDX80988 | Canola | plastid | 42.36 | 47.9 |
| AT5G06150.1 | Thale cress | nucleus | 43.59 | 47.42 |
| AT4G37490.1 | Thale cress | nucleus | 41.12 | 46.5 |
| CDX69311 | Canola | nucleus | 39.88 | 46.06 |
| TraesCS7A01G229300.1 | Wheat | endoplasmic reticulum | 31.2 | 45.9 |
| CDX75659 | Canola | nucleus | 40.5 | 45.79 |
| Bra011769.1-P | Field mustard | nucleus | 40.5 | 45.79 |
| KRH66718 | Soybean | plastid | 34.92 | 45.31 |
| KRG95056 | Soybean | cytosol | 32.85 | 41.09 |
| Zm00001d008221_P001 | Maize | nucleus | 39.26 | 39.67 |
| Zm00001d036360_P002 | Maize | nucleus | 30.79 | 35.14 |
| Zm00001d020033_P001 | Maize | nucleus | 38.64 | 34.38 |
| Zm00001d026129_P001 | Maize | nucleus | 30.17 | 34.27 |
| Zm00001d002662_P010 | Maize | nucleus | 31.61 | 33.63 |
| Zm00001d020996_P001 | Maize | nucleus | 37.6 | 33.46 |
| CDY14091 | Canola | plastid | 43.39 | 32.01 |
| Zm00001d033365_P002 | Maize | nucleus | 24.38 | 31.72 |
| CDY04980 | Canola | nucleus | 43.59 | 29.39 |
| Zm00001d013744_P001 | Maize | nucleus | 21.49 | 29.13 |
| Zm00001d032128_P001 | Maize | cytosol | 9.5 | 29.11 |
| AT1G34460.5 | Thale cress | cytosol | 29.55 | 28.71 |
| Zm00001d030849_P001 | Maize | nucleus | 23.97 | 27.42 |
| Zm00001d041334_P001 | Maize | nucleus, plastid | 23.97 | 26.54 |
| Zm00001d014756_P006 | Maize | nucleus, plastid | 26.24 | 24.38 |
| Zm00001d040381_P001 | Maize | plastid | 26.45 | 24.02 |
| Zm00001d023732_P002 | Maize | mitochondrion, nucleus, plastid | 22.73 | 22.68 |
| Zm00001d009011_P001 | Maize | nucleus, plastid | 23.35 | 22.16 |
| Zm00001d021353_P002 | Maize | mitochondrion, nucleus | 9.09 | 22.0 |
| Zm00001d010404_P001 | Maize | nucleus | 20.04 | 20.0 |
| Zm00001d048127_P001 | Maize | plastid | 19.21 | 19.42 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100283561 | MapMan:13.1.1.1.2 | UniProt:A0A1D6N9D4 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| ProteinID:ONM37154.1 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF343 |
| SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0001CAAB0C | EnsemblPlantsGene:Zm00001d043164 | EnsemblPlants:Zm00001d043164_P002 |
| EnsemblPlants:Zm00001d043164_T002 | SEG:seg | : | : | : | : |
Description
Cyclin-B1-4
Coordinates
chr3:+:190397962..190400788
Molecular Weight (calculated)
54167.9 Da
IEP (calculated)
9.643
GRAVY (calculated)
-0.157
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRNHNAAA PQLHHHNRGG GRCFLRGILT LWSKRSLAPM ILTTNISCHA DLLLSLVRWS AGVPALGKTK AVPARPDALN RRPPLGDIGN LVSVRPATGN
101: PQEQVNRPIT RSFGAQLVKK AQAKAAIKNA AILPARHAPR QERKAPVKQH PPPEDIIVLS SDSEQSRAQS ESSASSVRSR RKAINTLSSV LSARSKAACG
201: IAGKPRQVVD DIDKLDVNNE LAVVEYIEDI YTFYKIAQHE RRPCDYIDAQ LEINSKMRAI LADWIIEVHH KFELMPETLY LTMYIIDQYL SLQPVLRKEL
301: QLVGVSSMLI ACKYEEIWAP EVNDFILISD SAYSREQILS MEKGILNRLE WNLTVPTVYM FLVRFLKAAT LGGKVEKEME NMVFFFAELA LMQYDLVTRL
401: PSLVAASAVY AARLTLKRAP LWTDTLKHHT GFRESEAELI ECTKMLVIAH STAPESKLRV VYKKYSSEQF GGVALRPPAE EICK
101: PQEQVNRPIT RSFGAQLVKK AQAKAAIKNA AILPARHAPR QERKAPVKQH PPPEDIIVLS SDSEQSRAQS ESSASSVRSR RKAINTLSSV LSARSKAACG
201: IAGKPRQVVD DIDKLDVNNE LAVVEYIEDI YTFYKIAQHE RRPCDYIDAQ LEINSKMRAI LADWIIEVHH KFELMPETLY LTMYIIDQYL SLQPVLRKEL
301: QLVGVSSMLI ACKYEEIWAP EVNDFILISD SAYSREQILS MEKGILNRLE WNLTVPTVYM FLVRFLKAAT LGGKVEKEME NMVFFFAELA LMQYDLVTRL
401: PSLVAASAVY AARLTLKRAP LWTDTLKHHT GFRESEAELI ECTKMLVIAH STAPESKLRV VYKKYSSEQF GGVALRPPAE EICK
001: MATRANVPEQ VRGAPLVDGL KIQNKNGAVK SRRALGDIGN LVSVPGVQGG KAQPPINRPI TRSFRAQLLA NAQLERKPIN GDNKVPALGP KRQPLAARNP
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS
Arabidopsis Description
CYCB1-2Cyclin-B1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39067]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.