Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05388 | Sorghum | nucleus | 86.15 | 82.84 |
| TraesCS6B01G244800.1 | Wheat | nucleus | 58.77 | 63.04 |
| TraesCS6D01G197500.1 | Wheat | nucleus | 59.38 | 62.66 |
| TraesCS6A01G214900.1 | Wheat | nucleus | 59.69 | 61.78 |
| HORVU6Hr1G054910.7 | Barley | nucleus | 57.23 | 57.41 |
| CDY70200 | Canola | nucleus | 17.23 | 55.45 |
| Os02t0603600-01 | Rice | nucleus | 30.15 | 55.37 |
| Zm00001d023444_P001 | Maize | cytosol | 6.77 | 46.81 |
| Bra000291.1-P | Field mustard | nucleus | 26.15 | 41.87 |
| CDX83499 | Canola | nucleus | 26.15 | 41.87 |
| CDY42800 | Canola | nucleus | 26.15 | 41.87 |
| GSMUA_Achr6P21220_001 | Banana | vacuole | 34.46 | 40.14 |
| Zm00001d051122_P001 | Maize | nucleus | 17.85 | 38.16 |
| KRG93108 | Soybean | extracellular | 33.23 | 37.76 |
| VIT_05s0124g00240.t01 | Wine grape | plastid | 38.77 | 35.69 |
| Bra004748.1-P | Field mustard | nucleus | 32.92 | 34.97 |
| CDY17944 | Canola | nucleus | 32.92 | 34.41 |
| AT2G43140.2 | Thale cress | nucleus | 32.0 | 33.66 |
| CDY30384 | Canola | nucleus | 31.08 | 32.9 |
| Solyc09g098110.2.1 | Tomato | nucleus, plastid | 36.0 | 32.77 |
| PGSC0003DMT400016793 | Potato | nucleus, plastid | 35.08 | 32.76 |
| CDY51319 | Canola | nucleus, plastid | 36.0 | 32.5 |
| Bra015456.1-P | Field mustard | nucleus, plastid | 36.0 | 32.5 |
| Zm00001d042482_P001 | Maize | nucleus | 36.0 | 32.32 |
| Bra037732.1-P | Field mustard | nucleus | 29.23 | 31.25 |
| CDY10149 | Canola | nucleus, plastid | 33.54 | 30.97 |
| AT1G05805.1 | Thale cress | nucleus, plastid | 33.85 | 30.39 |
| CDY66632 | Canola | cytosol, nucleus, plastid | 15.08 | 29.7 |
| Zm00001d006578_P001 | Maize | nucleus | 31.38 | 27.79 |
| Zm00001d031441_P001 | Maize | nucleus | 29.23 | 25.0 |
| Zm00001d020932_P001 | Maize | nucleus | 30.77 | 24.51 |
| Zm00001d006022_P001 | Maize | nucleus, plastid | 29.85 | 23.89 |
| Zm00001d021748_P001 | Maize | plastid | 26.15 | 22.73 |
| CDY10155 | Canola | nucleus, plastid | 16.62 | 19.15 |
Protein Annotations
| EntrezGene:103627392 | MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A1D6HCJ0 | ProteinID:AQK72416.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF51 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0004DEBA52 | EnsemblPlantsGene:Zm00001d017138 | EnsemblPlants:Zm00001d017138_P001 | EnsemblPlants:Zm00001d017138_T001 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
Transcription factor bHLH128
Coordinates
chr5:+:186660341..186666947
Molecular Weight (calculated)
34047.6 Da
IEP (calculated)
8.924
GRAVY (calculated)
-0.684
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRFLPAGGG GGGGEPSSSS SSGGHQHHQH GGLASGERAA AGLRYRGGAD ISLGHGHDDG GHGRSIDAAD RRNDGSMDML ARHSSSPVGF FSNLVVDNGY
101: PRSNKAGGGG GVEGQQHDPS TAANASGSSA RKMKTPEFNF TGAQQGQQLG AAAGHLSRIS EDGAFPGGMM GDRAGRGSAG ESSGAAAAAR SYSAGGFSIV
201: GPWEESRDII TTLGAYDPQF SGAMAGTALE MAGMDRYVQL QQDQVPFKVR AKRGCATHPR SIAERERRTR ISEKLRKLQD LVPNMDKQTS TADMLDLAVE
301: HIRGLQSELQ ALKHEQEKCT CCRKR
101: PRSNKAGGGG GVEGQQHDPS TAANASGSSA RKMKTPEFNF TGAQQGQQLG AAAGHLSRIS EDGAFPGGMM GDRAGRGSAG ESSGAAAAAR SYSAGGFSIV
201: GPWEESRDII TTLGAYDPQF SGAMAGTALE MAGMDRYVQL QQDQVPFKVR AKRGCATHPR SIAERERRTR ISEKLRKLQD LVPNMDKQTS TADMLDLAVE
301: HIRGLQSELQ ALKHEQEKCT CCRKR
001: MEEGTGFSLG RPNGGYGGGG EQGPSRLKSE LRFSSGSSSH QEHNSLPRIS EVEAAAAARN GVASSSMSFG NNRTNNWDNS SSHISFTIDQ PGKRSKNSDF
101: FTLETQYSMP QTTLEMATME NLMNIPEDSV PCRARAKRGF ATHPRSIAER ERRTRISGKL KKLQELVPNM DKQTSYADML DLAVEHIKGL QHQVESLEKG
201: MERCTCGACK KR
101: FTLETQYSMP QTTLEMATME NLMNIPEDSV PCRARAKRGF ATHPRSIAER ERRTRISGKL KKLQELVPNM DKQTSYADML DLAVEHIKGL QHQVESLEKG
201: MERCTCGACK KR
Arabidopsis Description
Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IQ66]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.