Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023444_P001 | Maize | cytosol | 9.74 | 78.72 |
| Zm00001d006578_P001 | Maize | nucleus | 71.05 | 73.57 |
| Zm00001d021748_P001 | Maize | plastid | 68.95 | 70.05 |
| TraesCS7D01G244300.1 | Wheat | nucleus, plastid | 70.0 | 68.91 |
| TraesCS7A01G245800.1 | Wheat | nucleus | 69.21 | 68.67 |
| TraesCS7B01G145800.1 | Wheat | nucleus, plastid | 69.21 | 67.96 |
| OQU80938 | Sorghum | nucleus | 82.89 | 67.74 |
| Os08t0506700-01 | Rice | nucleus | 69.74 | 66.42 |
| HORVU7Hr1G050530.1 | Barley | cytosol | 44.21 | 62.45 |
| Zm00001d051122_P001 | Maize | nucleus | 23.68 | 59.21 |
| Zm00001d020932_P001 | Maize | nucleus | 60.79 | 56.62 |
| Zm00001d006022_P001 | Maize | nucleus, plastid | 59.21 | 55.42 |
| KRH38466 | Soybean | nucleus | 11.05 | 50.0 |
| VIT_06s0004g01740.t01 | Wine grape | nucleus | 35.53 | 45.45 |
| CDY53498 | Canola | nucleus, plastid | 35.53 | 41.54 |
| Bra004678.1-P | Field mustard | nucleus, plastid | 34.74 | 40.49 |
| CDX79884 | Canola | nucleus, plastid | 34.74 | 40.37 |
| KRH23160 | Soybean | nucleus | 42.11 | 39.22 |
| VIT_08s0007g07810.t01 | Wine grape | nucleus | 40.53 | 39.09 |
| GSMUA_Achr3P11110_001 | Banana | nucleus | 40.53 | 39.09 |
| CDY14822 | Canola | nucleus | 34.74 | 38.26 |
| CDY47961 | Canola | nucleus | 35.0 | 38.22 |
| KRH24679 | Soybean | nucleus | 41.58 | 38.07 |
| Bra016886.1-P | Field mustard | nucleus | 34.74 | 37.93 |
| AT2G42280.3 | Thale cress | nucleus | 35.79 | 37.78 |
| KRH71888 | Soybean | nucleus, plastid | 37.37 | 37.57 |
| KRH29679 | Soybean | nucleus | 41.05 | 37.32 |
| GSMUA_Achr9P27780_001 | Banana | nucleus | 40.53 | 37.11 |
| PGSC0003DMT400021062 | Potato | nucleus | 36.58 | 36.58 |
| VIT_13s0064g01290.t01 | Wine grape | nucleus, plastid | 36.84 | 36.55 |
| Solyc10g079050.1.1 | Tomato | nucleus | 36.05 | 36.05 |
| PGSC0003DMT400065029 | Potato | nucleus | 37.63 | 36.02 |
| KRH33007 | Soybean | nucleus, plastid | 36.05 | 35.68 |
| Solyc01g086870.2.1 | Tomato | nucleus | 36.32 | 33.91 |
| AT1G51140.1 | Thale cress | nucleus | 33.68 | 33.77 |
| Bra018896.1-P | Field mustard | nucleus | 31.84 | 33.52 |
| KRH67021 | Soybean | nucleus | 33.95 | 33.33 |
| CDY25213 | Canola | nucleus | 31.58 | 32.97 |
| CDY22828 | Canola | nucleus | 31.32 | 32.96 |
| KRG95337 | Soybean | nucleus | 33.16 | 32.9 |
| KRH10175 | Soybean | nucleus | 35.26 | 32.52 |
| Solyc12g100140.1.1 | Tomato | nucleus | 37.89 | 32.0 |
| Zm00001d042482_P001 | Maize | nucleus | 29.74 | 31.22 |
| PGSC0003DMT400056716 | Potato | nucleus | 35.26 | 30.39 |
| PGSC0003DMT400061284 | Potato | nucleus | 38.68 | 30.06 |
| Solyc11g056650.1.1 | Tomato | nucleus | 34.74 | 29.93 |
| KRH27501 | Soybean | nucleus | 33.95 | 29.72 |
| Zm00001d017138_P001 | Maize | nucleus | 25.0 | 29.23 |
| KRH20846 | Soybean | nucleus | 33.42 | 29.0 |
| KRH43476 | Soybean | nucleus | 32.11 | 27.11 |
| KRH13908 | Soybean | extracellular, nucleus | 31.32 | 26.1 |
Protein Annotations
| EntrezGene:100279237 | MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A1D6KIQ5 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | ProteinID:ONM02869.1 |
| ProteinID:ONM02871.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF55 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0001D64636 | EnsemblPlantsGene:Zm00001d031441 | EnsemblPlants:Zm00001d031441_P001 | EnsemblPlants:Zm00001d031441_T001 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
bHLH-transcription factor 112Transcription factor bHLH130
Coordinates
chr1:+:190232595..190235627
Molecular Weight (calculated)
40091.9 Da
IEP (calculated)
6.953
GRAVY (calculated)
-0.531
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGSPVSKDL NLPAQPPPMA SSGLLRYRSA PSAVLGGLCE DQLQLPAAAP SAADNVFSRF LPDHHIRDDK PSPAHFPSAA DMASHHQQEQ MMFHSQSQSQ
101: HQQETGRSGG GLYRTVSSGM EAGGTGVGAA SSLIRQSSSP AGFLDHFGMD NGYGAMLRAS MGMGFQDGGA SDSLAGGGGG SGRLGGQLSF SSRQGSLMSQ
201: ISEMDSQEDV VGASSPDAGG GGDAAYMPGY PMSSGGWDDS SSALLPDSLP ATNKRPRDSL EHGGGLAHQF SLPKTSSSEV AAIEKFLQFQ DAVPCKVRAK
301: RGCATHPRSI AERVRRTKIS ERIRKLQELV PDMDKQTNTS DMLDLAVDYI KDLQKQVKAL NESRASCTCP ASKHQQRFSG
101: HQQETGRSGG GLYRTVSSGM EAGGTGVGAA SSLIRQSSSP AGFLDHFGMD NGYGAMLRAS MGMGFQDGGA SDSLAGGGGG SGRLGGQLSF SSRQGSLMSQ
201: ISEMDSQEDV VGASSPDAGG GGDAAYMPGY PMSSGGWDDS SSALLPDSLP ATNKRPRDSL EHGGGLAHQF SLPKTSSSEV AAIEKFLQFQ DAVPCKVRAK
301: RGCATHPRSI AERVRRTKIS ERIRKLQELV PDMDKQTNTS DMLDLAVDYI KDLQKQVKAL NESRASCTCP ASKHQQRFSG
001: MDSNNHLYDP NPTGSGLLRF RSAPSSVLAA FVDDDKIGFD SDRLLSRFVT SNGVNGDLGS PKFEDKSPVS LTNTSVSYAA TLPPPPQLEP SSFLGLPPHY
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK ILNDNRANCK CMNKEKKSI
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK ILNDNRANCK CMNKEKKSI
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G42280]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.