Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79884 | Canola | nucleus, plastid | 94.15 | 93.58 |
| CDY14822 | Canola | nucleus | 77.54 | 73.04 |
| CDY47961 | Canola | nucleus | 77.85 | 72.7 |
| AT2G42280.3 | Thale cress | nucleus | 75.69 | 68.33 |
| Zm00001d023444_P001 | Maize | cytosol | 9.23 | 63.83 |
| Zm00001d051122_P001 | Maize | nucleus | 23.08 | 49.34 |
| CDY70200 | Canola | nucleus | 14.46 | 46.53 |
| KRH71888 | Soybean | nucleus, plastid | 50.15 | 43.12 |
| VIT_08s0007g07810.t01 | Wine grape | nucleus | 49.85 | 41.12 |
| KRH33007 | Soybean | nucleus, plastid | 48.0 | 40.62 |
| HORVU5Hr1G073170.5 | Barley | cytosol, nucleus, plastid | 22.77 | 40.44 |
| Solyc10g079050.1.1 | Tomato | nucleus | 47.08 | 40.26 |
| PGSC0003DMT400021062 | Potato | nucleus | 46.77 | 40.0 |
| KRG95337 | Soybean | nucleus | 43.69 | 37.08 |
| Zm00001d006578_P001 | Maize | nucleus | 41.85 | 37.06 |
| KRH67021 | Soybean | nucleus | 43.69 | 36.69 |
| CDY28415 | Canola | nucleus | 27.38 | 36.63 |
| CDY69278 | Canola | nucleus | 27.08 | 36.36 |
| HORVU7Hr1G050530.1 | Barley | cytosol | 29.85 | 36.06 |
| CDY41870 | Canola | nucleus | 26.77 | 35.66 |
| Zm00001d031441_P001 | Maize | nucleus | 41.54 | 35.53 |
| CDX91761 | Canola | nucleus | 26.77 | 35.37 |
| CDY61281 | Canola | nucleus | 26.77 | 34.66 |
| TraesCS7A01G245800.1 | Wheat | nucleus | 40.0 | 33.94 |
| TraesCS7D01G244300.1 | Wheat | nucleus, plastid | 40.0 | 33.68 |
| Os08t0506700-01 | Rice | nucleus | 41.23 | 33.58 |
| CDY42800 | Canola | nucleus | 20.92 | 33.5 |
| TraesCS7B01G145800.1 | Wheat | nucleus, plastid | 39.69 | 33.33 |
| CDX83499 | Canola | nucleus | 20.62 | 33.0 |
| Zm00001d021748_P001 | Maize | plastid | 37.54 | 32.62 |
| GSMUA_Achr7P20490_001 | Banana | nucleus | 35.08 | 32.48 |
| CDY25213 | Canola | nucleus | 35.69 | 31.87 |
| GSMUA_Achr5P22310_001 | Banana | nucleus | 37.85 | 31.78 |
| CDY22828 | Canola | nucleus | 35.08 | 31.58 |
| Zm00001d006022_P001 | Maize | nucleus, plastid | 39.38 | 31.53 |
| Os09t0487900-01 | Rice | nucleus | 38.46 | 31.17 |
| Zm00001d020932_P001 | Maize | nucleus | 38.46 | 30.64 |
| CDY51319 | Canola | nucleus, plastid | 33.54 | 30.28 |
| TraesCS5B01G264300.1 | Wheat | plastid | 38.15 | 30.24 |
| GSMUA_Achr3P11110_001 | Banana | nucleus | 36.62 | 30.2 |
| TraesCS5D01G272800.1 | Wheat | plastid | 38.46 | 30.12 |
| TraesCS5A01G264800.1 | Wheat | plastid | 37.54 | 29.83 |
| OQU80938 | Sorghum | nucleus | 42.46 | 29.68 |
| HORVU2Hr1G073240.1 | Barley | cytosol | 14.77 | 29.27 |
| CDY10149 | Canola | nucleus, plastid | 31.38 | 28.98 |
| GSMUA_Achr9P27780_001 | Banana | nucleus | 36.92 | 28.92 |
| KXG35904 | Sorghum | nucleus, plastid | 37.85 | 27.7 |
| CDY17944 | Canola | nucleus | 26.15 | 27.33 |
| CDY30384 | Canola | nucleus | 24.62 | 26.06 |
| HORVU7Hr1G047180.1 | Barley | plastid | 19.08 | 24.7 |
| CDY66632 | Canola | cytosol, nucleus, plastid | 11.38 | 22.42 |
| CDY10155 | Canola | nucleus, plastid | 16.0 | 18.44 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078IWX3 | UniProt:A0A078IWX3 | EnsemblPlants:CDY53498 | ProteinID:CDY53498 |
| ProteinID:CDY53498.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00010831001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR16223 | PANTHER:PTHR16223:SF67 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EACCA6 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaC04g02580DBnaC04g02580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IWX3]
Coordinates
chrLK033208:-:31667..33564
Molecular Weight (calculated)
36345.4 Da
IEP (calculated)
6.650
GRAVY (calculated)
-0.797
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSNTQNHLY DPNHVSSSSG SGLLRFRSAP SSVLAASVDD NDETVFNSNE FENKSPASYA ASPPPQQEPS SFLGLPPHYP KQSNGMMMMN TIGLDQFLSM
101: NNHHHTRPAE SHLLRQSSSP AGMFTNLSDQ NGYGYVGEEE EEEESPSLPN GLRRHSSLSS RPPSSLGMFS QIPEIDSESV QFSHWNDPSS FIDNLSSLKR
201: ETENDGKLFH GAQIMSHRLS LAKSASDVGS VDKYLQLQDS VPCKVRAKRG CATHPRSIAE RVRRTKISER MRKLQELVPN MDKQTNTSDM LDLAVDYIKD
301: LQRQYKILNE NRANCKCVNK EKNLI
101: NNHHHTRPAE SHLLRQSSSP AGMFTNLSDQ NGYGYVGEEE EEEESPSLPN GLRRHSSLSS RPPSSLGMFS QIPEIDSESV QFSHWNDPSS FIDNLSSLKR
201: ETENDGKLFH GAQIMSHRLS LAKSASDVGS VDKYLQLQDS VPCKVRAKRG CATHPRSIAE RVRRTKISER MRKLQELVPN MDKQTNTSDM LDLAVDYIKD
301: LQRQYKILNE NRANCKCVNK EKNLI
001: MDSNNHLYDP NPTGSGLLRF RSAPSSVLAA FVDDDKIGFD SDRLLSRFVT SNGVNGDLGS PKFEDKSPVS LTNTSVSYAA TLPPPPQLEP SSFLGLPPHY
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK ILNDNRANCK CMNKEKKSI
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK ILNDNRANCK CMNKEKKSI
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G42280]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.