Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P20490_001 | Banana | nucleus | 56.33 | 62.11 |
| KRH38466 | Soybean | nucleus | 11.11 | 51.19 |
| VIT_06s0004g01740.t01 | Wine grape | nucleus | 38.76 | 50.51 |
| VIT_13s0064g01290.t01 | Wine grape | nucleus, plastid | 41.6 | 42.04 |
| VIT_08s0007g07810.t01 | Wine grape | nucleus | 42.38 | 41.62 |
| KRH71888 | Soybean | nucleus, plastid | 39.79 | 40.74 |
| KRH24679 | Soybean | nucleus | 43.41 | 40.48 |
| KRH23160 | Soybean | nucleus | 42.64 | 40.44 |
| KRH29679 | Soybean | nucleus | 43.67 | 40.43 |
| KRH33007 | Soybean | nucleus, plastid | 40.05 | 40.36 |
| PGSC0003DMT400021062 | Potato | nucleus | 38.24 | 38.95 |
| CDY14822 | Canola | nucleus | 34.37 | 38.55 |
| GSMUA_Achr3P11110_001 | Banana | nucleus | 39.02 | 38.32 |
| CDY47961 | Canola | nucleus | 34.37 | 38.22 |
| Solyc10g079050.1.1 | Tomato | nucleus | 37.47 | 38.16 |
| Bra016886.1-P | Field mustard | nucleus | 34.11 | 37.93 |
| GSMUA_Achr1P27710_001 | Banana | nucleus | 32.82 | 37.91 |
| CDY53498 | Canola | nucleus, plastid | 31.78 | 37.85 |
| Bra004678.1-P | Field mustard | nucleus, plastid | 31.52 | 37.42 |
| CDX79884 | Canola | nucleus, plastid | 31.52 | 37.31 |
| PGSC0003DMT400065029 | Potato | nucleus | 38.24 | 37.28 |
| AT2G42280.3 | Thale cress | nucleus | 34.37 | 36.94 |
| GSMUA_Achr6P21220_001 | Banana | vacuole | 26.61 | 36.92 |
| GSMUA_Achr9P27780_001 | Banana | nucleus | 39.28 | 36.63 |
| GSMUA_Achr8P01370_001 | Banana | nucleus | 30.49 | 36.53 |
| AT1G51140.1 | Thale cress | nucleus | 34.63 | 35.36 |
| Bra018896.1-P | Field mustard | nucleus | 32.82 | 35.18 |
| KRH67021 | Soybean | nucleus | 35.14 | 35.14 |
| KRG95337 | Soybean | nucleus | 34.37 | 34.73 |
| Solyc01g086870.2.1 | Tomato | nucleus | 36.43 | 34.64 |
| CDY22828 | Canola | nucleus | 32.3 | 34.63 |
| CDY25213 | Canola | nucleus | 32.3 | 34.34 |
| KRH10175 | Soybean | nucleus | 35.4 | 33.25 |
| PGSC0003DMT400056716 | Potato | nucleus | 35.66 | 31.29 |
| Solyc12g100140.1.1 | Tomato | nucleus | 35.92 | 30.89 |
| KRH27501 | Soybean | nucleus | 34.63 | 30.88 |
| Solyc11g056650.1.1 | Tomato | nucleus | 34.88 | 30.61 |
| KRH20846 | Soybean | nucleus | 34.37 | 30.37 |
| GSMUA_Achr8P32130_001 | Banana | mitochondrion | 32.04 | 29.38 |
| PGSC0003DMT400061284 | Potato | nucleus | 36.95 | 29.24 |
| KRH43476 | Soybean | nucleus | 33.85 | 29.11 |
| KRH13908 | Soybean | extracellular, nucleus | 32.3 | 27.41 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P22310_001 | EnsemblPlants:GSMUA_Achr5T22310_001 | EnsemblPlantsGene:GSMUA_Achr5G22310_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR16223 | PANTHER:PTHR16223:SF69 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI00029658FE | UniProt:M0T0Q6 | MapMan:15.5.32 | : | : |
Description
Putative Transcription factor bHLH130 [Source:GMGC_GENE;Acc:GSMUA_Achr5G22310_001]
Coordinates
chr5:-:24397558..24399649
Molecular Weight (calculated)
41840.1 Da
IEP (calculated)
6.717
GRAVY (calculated)
-0.640
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGSPSGRPS EDLNLPYPPA GPSGLLRYRS APSSLLGEVC EDFLSVRASS PETETMLARF LAPDLRDETQ DGPSGGAATA SGQSSPHFPP PQLPPSAQEQ
101: QRQMPNHSSS ESPFRAVMGS LTMEAAQLKH GDFGSSSNLI RHSSSPAGLF SHLNVDEEDL KICAIGYGMR RGTSGFMMDA TDRSKGQISF SSRQNSVMSQ
201: ISEMESDDMD GSSSPKDGGG GGRSYIPGFP VGSWDDSSPF NNNSLSGLKG SRDGEEKMVT GLSPLELPQN GEVRNHGLGL FSLPRSTSEI ATIEKFLQFH
301: DAVPCKIRAK RGCATHPRSI AERVRRTRIS ERMKKLQELV PNMDKQTNTA DMLDLAVDYI KDLQKQVKAL SESRASCSCS AGRQKPY
101: QRQMPNHSSS ESPFRAVMGS LTMEAAQLKH GDFGSSSNLI RHSSSPAGLF SHLNVDEEDL KICAIGYGMR RGTSGFMMDA TDRSKGQISF SSRQNSVMSQ
201: ISEMESDDMD GSSSPKDGGG GGRSYIPGFP VGSWDDSSPF NNNSLSGLKG SRDGEEKMVT GLSPLELPQN GEVRNHGLGL FSLPRSTSEI ATIEKFLQFH
301: DAVPCKIRAK RGCATHPRSI AERVRRTRIS ERMKKLQELV PNMDKQTNTA DMLDLAVDYI KDLQKQVKAL SESRASCSCS AGRQKPY
001: MDSNNHLYDP NPTGSGLLRF RSAPSSVLAA FVDDDKIGFD SDRLLSRFVT SNGVNGDLGS PKFEDKSPVS LTNTSVSYAA TLPPPPQLEP SSFLGLPPHY
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK ILNDNRANCK CMNKEKKSI
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK ILNDNRANCK CMNKEKKSI
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G42280]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.