CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23160	Soybean	nucleus	82.77	83.58
KRH38466	Soybean	nucleus	15.29	75.0
KRH24679	Soybean	nucleus	58.01	57.59
KRH29679	Soybean	nucleus	58.25	57.42
VIT_06s0004g01740.t01	Wine grape	nucleus	33.5	46.46
Zm00001d051122_P001	Maize	nucleus	15.53	42.11
TraesCS7B01G145800.1	Wheat	nucleus, plastid	36.41	38.76
TraesCS7A01G245800.1	Wheat	nucleus	35.68	38.38
TraesCS7D01G244300.1	Wheat	nucleus, plastid	35.68	38.08
Zm00001d006578_P001	Maize	nucleus	33.74	37.87
HORVU7Hr1G050530.1	Barley	cytosol	24.27	37.17
KRH71888	Soybean	nucleus, plastid	33.98	37.04
KRH44925	Soybean	nucleus	13.84	36.31
KRH33007	Soybean	nucleus, plastid	33.5	35.94
Os08t0506700-01	Rice	nucleus	34.47	35.59
GSMUA_Achr5P22310_001	Banana	nucleus	33.25	35.4
GSMUA_Achr7P20490_001	Banana	nucleus	30.1	35.33
Zm00001d031441_P001	Maize	nucleus	32.52	35.26
HORVU5Hr1G073170.5	Barley	cytosol, nucleus, plastid	15.53	34.97
Zm00001d006022_P001	Maize	nucleus, plastid	33.98	34.48
Bra018896.1-P	Field mustard	nucleus	30.1	34.35
CDY22828	Canola	nucleus	29.85	34.07
Zm00001d020932_P001	Maize	nucleus	33.74	34.07
CDY25213	Canola	nucleus	29.61	33.52
Zm00001d021748_P001	Maize	plastid	30.1	33.16
AT1G51140.1	Thale cress	nucleus	30.34	32.98
KRG95337	Soybean	nucleus	30.58	32.9
Solyc12g100140.1.1	Tomato	nucleus	35.44	32.44
KRH67021	Soybean	nucleus	29.85	31.78
KXG35904	Sorghum	nucleus, plastid	34.22	31.76
KRG93108	Soybean	extracellular	21.84	31.47
TraesCS5B01G264300.1	Wheat	plastid	31.31	31.46
Os09t0487900-01	Rice	nucleus	30.58	31.42
TraesCS5A01G264800.1	Wheat	plastid	30.83	31.05
Solyc11g056650.1.1	Tomato	nucleus	33.01	30.84
PGSC0003DMT400056716	Potato	nucleus	33.01	30.84
TraesCS5D01G272800.1	Wheat	plastid	30.83	30.6
OQU80938	Sorghum	nucleus	34.22	30.32
PGSC0003DMT400061284	Potato	nucleus	35.68	30.06
GSMUA_Achr3P11110_001	Banana	nucleus	28.4	29.7
GSMUA_Achr9P27780_001	Banana	nucleus	29.85	29.64
KRH20846	Soybean	nucleus	29.13	27.4
KRH43476	Soybean	nucleus	29.85	27.33
KRH13908	Soybean	extracellular, nucleus	29.61	26.75
KRH27501	Soybean	nucleus	28.16	26.73
HORVU7Hr1G047180.1	Barley	plastid	11.41	18.73
HORVU2Hr1G073240.1	Barley	cytosol	7.28	18.29
Zm00001d023444_P001	Maize	cytosol	1.7	14.89

Protein Annotations

EMBL:ACUP02009121	EnsemblPlants:KRH10175	EnsemblPlantsGene:GLYMA_15G032700	EntrezGene:100806368	Gene3D:4.10.280.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638
InterPro:bHLH_dom	PANTHER:PTHR16223	PANTHER:PTHR16223:SF69	PFscan:PS50888	ProteinID:KRH10175	ProteinID:KRH10175.1
SEG:seg	SUPFAM:SSF47459	UniParc:UPI0003DEA366	UniProt:A0A0R0G6P4	MapMan:15.5.32	:

Description

hypothetical protein

Coordinates

chr15:-:2617841..2620783

Molecular Weight (calculated)

45762.7 Da

IEP (calculated)

7.774

GRAVY (calculated)

-0.820

Length

412 amino acids

Sequence
(BLAST)

001: MESDLEQQPQ VNSSGLTRYR SAPSSYFSNI IDREFYEHVF NRPSSPETER VFSRFVNSLN SEEEDSLHHK LSTDSSSSAA VKEEVNQQDQ GINEEHVAVA
101: ALQQSNNNIN NYNNNNNNNY SASHNFYQSS SSKPPLPNQN PNLPSAMEQG SFSMGLRHSG NNSNLTRHSS SPAGLFSQIN IENVYAGVRG MGSLGAVNNS
201: IEDAKFSSSR RLKNQPNYSS SGRMSSIAEI GDKGYRESSP DSEAFADGND FMAGFQVGHW DDTAMMSDNV GGLKRFSEED SKPFSGLNAV ETQNETGQTH
301: APLAHQLSLP NTSAEMAAIE KFLQFSDSVP CKIRAKRGCA THPRSIAERV RRTKISERMR KLQDLVPNMD KTFKSKFRHF QIVMQSVRVH TRSNNNGKKG
401: RLVDLACVSI SR

Best Arabidopsis Sequence Match ( AT1G51140.1 )
(BLAST)

001: MESEFQQHHF LLHDHQHQRP RNSGLIRYQS APSSYFSSFG ESIEEFLDRP TSPETERILS GFLQTTDTSD NVDSFLHHTF NSDGTEKKPP EVKTEDEDAE
101: IPVTATATAM EVVVSGDGEI SVNPEVSIGY VASVSRNKRP REKDDRTPVN NLARHNSSPA GLFSSIDVET AYAAVMKSMG GFGGSNVMST SNTEASSLTP
201: RSKLLPPTSR AMSPISEVDV KPGFSSRLPP RTLSGGFNRS FGNEGSASSK LTALARTQSG GLDQYKTKDE DSASRRPPLA HHMSLPKSLS DIEQLLSDSI
301: PCKIRAKRGC ATHPRSIAER VRRTKISERM RKLQDLVPNM DTQTNTADML DLAVQYIKDL QEQVKALEES RARCRCSSA

Arabidopsis Description

BHLH122Transcription factor bHLH122 [Source:UniProtKB/Swiss-Prot;Acc:Q9C690]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.