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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018896.1-P Field mustard nucleus 81.27 85.32
CDY25213 Canola nucleus 81.79 85.16
CDY22828 Canola nucleus 80.74 84.76
Zm00001d023444_P001 Maize cytosol 7.12 57.45
Zm00001d051122_P001 Maize nucleus 17.94 44.74
VIT_06s0004g01740.t01 Wine grape nucleus 33.25 42.42
KRH38466 Soybean nucleus 9.23 41.67
HORVU5Hr1G073170.5 Barley cytosol, nucleus, plastid 18.73 38.8
HORVU7Hr1G050530.1 Barley cytosol 25.59 36.06
KRH23160 Soybean nucleus 38.26 35.54
KRH29679 Soybean nucleus 38.79 35.17
GSMUA_Achr5P22310_001 Banana nucleus 35.36 34.63
GSMUA_Achr7P20490_001 Banana nucleus 31.93 34.47
KRH24679 Soybean nucleus 37.47 34.22
AT2G42280.3 Thale cress nucleus 32.45 34.17
Zm00001d031441_P001 Maize nucleus 33.77 33.68
TraesCS7A01G245800.1 Wheat nucleus 34.04 33.68
TraesCS7D01G244300.1 Wheat nucleus, plastid 34.04 33.42
TraesCS7B01G145800.1 Wheat nucleus, plastid 34.04 33.33
Zm00001d006578_P001 Maize nucleus 32.19 33.24
Os08t0506700-01 Rice nucleus 34.04 32.33
Zm00001d020932_P001 Maize nucleus 34.3 31.86
Zm00001d006022_P001 Maize nucleus, plastid 33.77 31.53
GSMUA_Achr3P11110_001 Banana nucleus 32.72 31.47
AT1G35460.1 Thale cress nucleus 21.37 31.27
Os09t0487900-01 Rice nucleus 32.98 31.17
KRH10175 Soybean nucleus 32.98 30.34
TraesCS5B01G264300.1 Wheat plastid 32.45 30.0
Zm00001d021748_P001 Maize plastid 29.55 29.95
TraesCS5D01G272800.1 Wheat plastid 32.72 29.88
TraesCS5A01G264800.1 Wheat plastid 32.19 29.83
AT4G09180.1 Thale cress nucleus 20.58 29.77
Solyc12g100140.1.1 Tomato nucleus 35.09 29.56
AT2G43140.2 Thale cress nucleus 24.01 29.45
AT1G05805.1 Thale cress nucleus, plastid 27.97 29.28
OQU80938 Sorghum nucleus 34.83 28.39
KXG35904 Sorghum nucleus, plastid 33.25 28.38
GSMUA_Achr9P27780_001 Banana nucleus 30.87 28.19
PGSC0003DMT400056716 Potato nucleus 32.72 28.12
Solyc11g056650.1.1 Tomato nucleus 32.19 27.66
PGSC0003DMT400061284 Potato nucleus 34.83 26.99
HORVU2Hr1G073240.1 Barley cytosol 11.08 25.61
HORVU7Hr1G047180.1 Barley plastid 14.51 21.91
Protein Annotations
MapMan:15.5.32Gene3D:4.10.280.10EntrezGene:841537UniProt:A0A178WHN7ProteinID:AAG50543.1ProteinID:AEE32626.1
ArrayExpress:AT1G51140EnsemblPlantsGene:AT1G51140RefSeq:AT1G51140TAIR:AT1G51140RefSeq:AT1G51140-TAIR-GEnsemblPlants:AT1G51140.1
TAIR:AT1G51140.1EMBL:AY034941EMBL:AY063120Unigene:At.19155ncoils:CoilGO:GO:0000003
GO:GO:0001046GO:GO:0001228GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0006366GO:GO:0007275GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009628GO:GO:0009791GO:GO:0009987GO:GO:0010119
GO:GO:0042335GO:GO:0045944GO:GO:0046983GO:GO:0048573InterPro:HLH_DNA-bd_sfInterPro:IPR011598
InterPro:IPR036638RefSeq:NP_564583.1ProteinID:OAP16612.1PFAM:PF00010PO:PO:0000013PO:PO:0000037
PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PFscan:PS50888PANTHER:PTHR16223
PANTHER:PTHR16223:SF29UniProt:Q9C690SMART:SM00353SUPFAM:SSF47459UniParc:UPI00000AA2A6InterPro:bHLH_dom
SEG:seg:::::
Description
BHLH122Transcription factor bHLH122 [Source:UniProtKB/Swiss-Prot;Acc:Q9C690]
Coordinates
chr1:-:18943447..18945812
Molecular Weight (calculated)
41718.7 Da
IEP (calculated)
6.913
GRAVY (calculated)
-0.679
Length
379 amino acids
Sequence
(BLAST)
001: MESEFQQHHF LLHDHQHQRP RNSGLIRYQS APSSYFSSFG ESIEEFLDRP TSPETERILS GFLQTTDTSD NVDSFLHHTF NSDGTEKKPP EVKTEDEDAE
101: IPVTATATAM EVVVSGDGEI SVNPEVSIGY VASVSRNKRP REKDDRTPVN NLARHNSSPA GLFSSIDVET AYAAVMKSMG GFGGSNVMST SNTEASSLTP
201: RSKLLPPTSR AMSPISEVDV KPGFSSRLPP RTLSGGFNRS FGNEGSASSK LTALARTQSG GLDQYKTKDE DSASRRPPLA HHMSLPKSLS DIEQLLSDSI
301: PCKIRAKRGC ATHPRSIAER VRRTKISERM RKLQDLVPNM DTQTNTADML DLAVQYIKDL QEQVKALEES RARCRCSSA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.