Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023444_P001 | Maize | cytosol | 11.23 | 89.36 |
| Zm00001d006578_P001 | Maize | nucleus | 83.42 | 85.01 |
| Zm00001d031441_P001 | Maize | nucleus | 70.05 | 68.95 |
| Zm00001d020932_P001 | Maize | nucleus | 60.43 | 55.39 |
| Zm00001d006022_P001 | Maize | nucleus, plastid | 59.36 | 54.68 |
| Zm00001d051122_P001 | Maize | nucleus | 20.59 | 50.66 |
| VIT_06s0004g01740.t01 | Wine grape | nucleus | 34.22 | 43.1 |
| CDY53498 | Canola | nucleus, plastid | 32.62 | 37.54 |
| VIT_08s0007g07810.t01 | Wine grape | nucleus | 39.3 | 37.31 |
| Bra004678.1-P | Field mustard | nucleus, plastid | 32.35 | 37.12 |
| CDX79884 | Canola | nucleus, plastid | 32.35 | 37.0 |
| KRH23160 | Soybean | nucleus | 39.84 | 36.52 |
| CDY47961 | Canola | nucleus | 33.42 | 35.92 |
| KRH71888 | Soybean | nucleus, plastid | 36.1 | 35.71 |
| CDY14822 | Canola | nucleus | 32.89 | 35.65 |
| Bra016886.1-P | Field mustard | nucleus | 33.16 | 35.63 |
| AT2G42280.3 | Thale cress | nucleus | 34.22 | 35.56 |
| GSMUA_Achr3P11110_001 | Banana | nucleus | 37.43 | 35.53 |
| PGSC0003DMT400021062 | Potato | nucleus | 35.29 | 34.74 |
| KRH29679 | Soybean | nucleus | 38.77 | 34.69 |
| KRH38466 | Soybean | nucleus | 7.75 | 34.52 |
| VIT_13s0064g01290.t01 | Wine grape | nucleus, plastid | 35.29 | 34.46 |
| KRH24679 | Soybean | nucleus | 38.24 | 34.46 |
| Solyc10g079050.1.1 | Tomato | nucleus | 34.76 | 34.21 |
| KRH33007 | Soybean | nucleus, plastid | 35.03 | 34.11 |
| GSMUA_Achr9P27780_001 | Banana | nucleus | 37.17 | 33.49 |
| PGSC0003DMT400065029 | Potato | nucleus | 35.29 | 33.25 |
| KRH67021 | Soybean | nucleus | 32.89 | 31.78 |
| KRG95337 | Soybean | nucleus | 32.09 | 31.33 |
| Solyc01g086870.2.1 | Tomato | nucleus | 33.69 | 30.96 |
| KRH10175 | Soybean | nucleus | 33.16 | 30.1 |
| AT1G51140.1 | Thale cress | nucleus | 29.95 | 29.55 |
| Bra018896.1-P | Field mustard | nucleus | 28.34 | 29.36 |
| Solyc11g056650.1.1 | Tomato | nucleus | 34.22 | 29.02 |
| CDY25213 | Canola | nucleus | 28.07 | 28.85 |
| CDY22828 | Canola | nucleus | 27.81 | 28.81 |
| Solyc12g100140.1.1 | Tomato | nucleus | 34.49 | 28.67 |
| PGSC0003DMT400056716 | Potato | nucleus | 33.69 | 28.57 |
| KRH27501 | Soybean | nucleus | 32.62 | 28.11 |
| KRH20846 | Soybean | nucleus | 32.89 | 28.08 |
| HORVU2Hr1G073240.1 | Barley | cytosol | 12.03 | 27.44 |
| Zm00001d042482_P001 | Maize | nucleus | 26.2 | 27.07 |
| PGSC0003DMT400061284 | Potato | nucleus | 34.76 | 26.58 |
| Zm00001d017138_P001 | Maize | nucleus | 22.73 | 26.15 |
| KRH43476 | Soybean | nucleus | 31.28 | 26.0 |
| KRH13908 | Soybean | extracellular, nucleus | 31.02 | 25.44 |
| HORVU7Hr1G047180.1 | Barley | plastid | 16.31 | 24.3 |
Protein Annotations
| EntrezGene:100282357 | MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A1D6IF18 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | ProteinID:ONM58269.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF55 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0008436BF6 | EnsemblPlantsGene:Zm00001d021748 | EnsemblPlants:Zm00001d021748_P001 | EnsemblPlants:Zm00001d021748_T001 | InterPro:bHLH_dom | SEG:seg |
Description
bHLH-transcription factor 90DNA binding protein
Coordinates
chr7:-:162167457..162170381
Molecular Weight (calculated)
39720.3 Da
IEP (calculated)
4.963
GRAVY (calculated)
-0.475
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGSPVSKDL NLPVQPPMAS SGLLRYRSAP STVLGDLCED FLSSAPRAAS PDAGADNVFS RFLADHHIRD DKPSPLASAA VHFPTETDTA SQQQQQQMMF
101: HSQQQQEMVS AKSGLYRTVN SGVETAAAAG AGGASSSDNA SNLIRQSSSP AGFLDHLNME NGYGAMLRAG MATADSLAGG GSRLKGQLSF SSRQGSLMSQ
201: ISEMDSEEVG GSSPEASGGG GRGYIPGYPM GSGWEDSSAL LSDNLSGVKR PRDSSEPGQS GLTHQFSVPK TSSEMATIEK FLQFQDAVPC FESAVEGLAD
301: DVLVCGAQVR RTKISERIRK LQELVPNMDK QTNTSDMLDL AVDYIKDLQK QVKVLKESQD NCTCSASKNQ QHSC
101: HSQQQQEMVS AKSGLYRTVN SGVETAAAAG AGGASSSDNA SNLIRQSSSP AGFLDHLNME NGYGAMLRAG MATADSLAGG GSRLKGQLSF SSRQGSLMSQ
201: ISEMDSEEVG GSSPEASGGG GRGYIPGYPM GSGWEDSSAL LSDNLSGVKR PRDSSEPGQS GLTHQFSVPK TSSEMATIEK FLQFQDAVPC FESAVEGLAD
301: DVLVCGAQVR RTKISERIRK LQELVPNMDK QTNTSDMLDL AVDYIKDLQK QVKVLKESQD NCTCSASKNQ QHSC
001: MDSNNHLYDP NPTGSGLLRF RSAPSSVLAA FVDDDKIGFD SDRLLSRFVT SNGVNGDLGS PKFEDKSPVS LTNTSVSYAA TLPPPPQLEP SSFLGLPPHY
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK ILNDNRANCK CMNKEKKSI
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK ILNDNRANCK CMNKEKKSI
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G42280]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.