Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051122_P001 | Maize | nucleus | 41.67 | 23.03 |
| KRH24679 | Soybean | nucleus | 92.86 | 18.8 |
| KRH29679 | Soybean | nucleus | 92.86 | 18.66 |
| HORVU5Hr1G073170.5 | Barley | cytosol, nucleus, plastid | 40.48 | 18.58 |
| HORVU7Hr1G050530.1 | Barley | cytosol | 54.76 | 17.1 |
| VIT_06s0004g01740.t01 | Wine grape | nucleus | 59.52 | 16.84 |
| KRH10175 | Soybean | nucleus | 75.0 | 15.29 |
| KRH23160 | Soybean | nucleus | 73.81 | 15.2 |
| KRH44925 | Soybean | nucleus | 25.0 | 13.38 |
| KRH71888 | Soybean | nucleus, plastid | 55.95 | 12.43 |
| TraesCS7A01G245800.1 | Wheat | nucleus | 55.95 | 12.27 |
| GSMUA_Achr7P20490_001 | Banana | nucleus | 51.19 | 12.25 |
| KRH33007 | Soybean | nucleus, plastid | 55.95 | 12.24 |
| KRG93108 | Soybean | extracellular | 41.67 | 12.24 |
| TraesCS7D01G244300.1 | Wheat | nucleus, plastid | 55.95 | 12.18 |
| TraesCS7B01G145800.1 | Wheat | nucleus, plastid | 55.95 | 12.14 |
| Os08t0506700-01 | Rice | nucleus | 57.14 | 12.03 |
| Zm00001d006578_P001 | Maize | nucleus | 51.19 | 11.72 |
| Zm00001d006022_P001 | Maize | nucleus, plastid | 55.95 | 11.58 |
| GSMUA_Achr5P22310_001 | Banana | nucleus | 51.19 | 11.11 |
| Zm00001d031441_P001 | Maize | nucleus | 50.0 | 11.05 |
| Zm00001d020932_P001 | Maize | nucleus | 53.57 | 11.03 |
| KRH67021 | Soybean | nucleus | 48.81 | 10.59 |
| KXG35904 | Sorghum | nucleus, plastid | 55.95 | 10.59 |
| Os09t0487900-01 | Rice | nucleus | 50.0 | 10.47 |
| KRG95337 | Soybean | nucleus | 47.62 | 10.44 |
| OQU80938 | Sorghum | nucleus | 57.14 | 10.32 |
| GSMUA_Achr9P27780_001 | Banana | nucleus | 48.81 | 9.88 |
| TraesCS5B01G264300.1 | Wheat | plastid | 47.62 | 9.76 |
| Bra018896.1-P | Field mustard | nucleus | 41.67 | 9.7 |
| CDY22828 | Canola | nucleus | 41.67 | 9.7 |
| TraesCS5D01G272800.1 | Wheat | plastid | 47.62 | 9.64 |
| CDY25213 | Canola | nucleus | 41.67 | 9.62 |
| GSMUA_Achr3P11110_001 | Banana | nucleus | 44.05 | 9.39 |
| TraesCS5A01G264800.1 | Wheat | plastid | 45.24 | 9.29 |
| AT1G51140.1 | Thale cress | nucleus | 41.67 | 9.23 |
| Solyc12g100140.1.1 | Tomato | nucleus | 48.81 | 9.11 |
| KRH43476 | Soybean | nucleus | 48.81 | 9.11 |
| KRH13908 | Soybean | extracellular, nucleus | 46.43 | 8.55 |
| KRH27501 | Soybean | nucleus | 42.86 | 8.29 |
| KRH20846 | Soybean | nucleus | 42.86 | 8.22 |
| PGSC0003DMT400061284 | Potato | nucleus | 47.62 | 8.18 |
| Zm00001d021748_P001 | Maize | plastid | 34.52 | 7.75 |
| Solyc11g056650.1.1 | Tomato | nucleus | 40.48 | 7.71 |
| PGSC0003DMT400056716 | Potato | nucleus | 40.48 | 7.71 |
| HORVU7Hr1G047180.1 | Barley | plastid | 20.24 | 6.77 |
| HORVU2Hr1G073240.1 | Barley | cytosol | 11.9 | 6.1 |
| Zm00001d023444_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02005818 | EnsemblPlants:KRH38466 | EnsemblPlantsGene:GLYMA_09G137400 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF69 | ProteinID:KRH38466 |
| ProteinID:KRH38466.1 | UniParc:UPI0006EDE5E0 | UniProt:A0A0R0IBY5 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr9:-:34033000..34033363
Molecular Weight (calculated)
9253.0 Da
IEP (calculated)
10.116
GRAVY (calculated)
-0.586
Length
84 amino acids
Sequence
(BLAST)
(BLAST)
1: MTGLKRFRDE DVKPFSGLNA PESQNEIRGQ QPSSSALAHQ LSLPNTSAEM TAIEKFLQLS DFVPSKIRAK RGCATHPRSI AEKV
001: MDSNNHLYDP NPTGSGLLRF RSAPSSVLAA FVDDDKIGFD SDRLLSRFVT SNGVNGDLGS PKFEDKSPVS LTNTSVSYAA TLPPPPQLEP SSFLGLPPHY
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVTSPS
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVTSPS
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G42280]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.