Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020932_P001 | Maize | nucleus | 88.92 | 88.48 |
| KXG35904 | Sorghum | nucleus, plastid | 87.44 | 79.95 |
| Os09t0487900-01 | Rice | nucleus | 66.75 | 67.58 |
| Zm00001d023444_P001 | Maize | cytosol | 7.64 | 65.96 |
| Zm00001d006578_P001 | Maize | nucleus | 58.13 | 64.31 |
| TraesCS5B01G264300.1 | Wheat | plastid | 63.3 | 62.68 |
| TraesCS5A01G264800.1 | Wheat | plastid | 63.05 | 62.59 |
| TraesCS5D01G272800.1 | Wheat | plastid | 63.05 | 61.69 |
| Zm00001d021748_P001 | Maize | plastid | 54.68 | 59.36 |
| Zm00001d031441_P001 | Maize | nucleus | 55.42 | 59.21 |
| KRH38466 | Soybean | nucleus | 11.58 | 55.95 |
| Zm00001d051122_P001 | Maize | nucleus | 20.94 | 55.92 |
| HORVU5Hr1G073170.5 | Barley | cytosol, nucleus, plastid | 21.43 | 47.54 |
| VIT_06s0004g01740.t01 | Wine grape | nucleus | 33.74 | 46.13 |
| VIT_08s0007g07810.t01 | Wine grape | nucleus | 41.38 | 42.64 |
| KRH23160 | Soybean | nucleus | 41.63 | 41.42 |
| KRH71888 | Soybean | nucleus, plastid | 38.18 | 41.01 |
| Bra004678.1-P | Field mustard | nucleus, plastid | 32.02 | 39.88 |
| CDX79884 | Canola | nucleus, plastid | 32.02 | 39.76 |
| GSMUA_Achr3P11110_001 | Banana | nucleus | 38.42 | 39.59 |
| CDY53498 | Canola | nucleus, plastid | 31.53 | 39.38 |
| PGSC0003DMT400021062 | Potato | nucleus | 36.7 | 39.21 |
| KRH33007 | Soybean | nucleus, plastid | 36.21 | 38.28 |
| CDY14822 | Canola | nucleus | 32.51 | 38.26 |
| CDY47961 | Canola | nucleus | 32.76 | 38.22 |
| Solyc10g079050.1.1 | Tomato | nucleus | 35.71 | 38.16 |
| Bra016886.1-P | Field mustard | nucleus | 32.51 | 37.93 |
| KRH24679 | Soybean | nucleus | 38.67 | 37.83 |
| KRH29679 | Soybean | nucleus | 38.92 | 37.8 |
| VIT_13s0064g01290.t01 | Wine grape | nucleus, plastid | 35.47 | 37.6 |
| AT2G42280.3 | Thale cress | nucleus | 33.0 | 37.22 |
| GSMUA_Achr9P27780_001 | Banana | nucleus | 37.44 | 36.63 |
| KRG95337 | Soybean | nucleus | 34.24 | 36.29 |
| KRH67021 | Soybean | nucleus | 34.48 | 36.18 |
| PGSC0003DMT400065029 | Potato | nucleus | 34.48 | 35.26 |
| KRH10175 | Soybean | nucleus | 34.48 | 33.98 |
| AT1G51140.1 | Thale cress | nucleus | 31.53 | 33.77 |
| Solyc01g086870.2.1 | Tomato | nucleus | 33.5 | 33.42 |
| CDY22828 | Canola | nucleus | 29.31 | 32.96 |
| Bra018896.1-P | Field mustard | nucleus | 29.31 | 32.96 |
| CDY25213 | Canola | nucleus | 29.31 | 32.69 |
| KRH27501 | Soybean | nucleus | 33.0 | 30.88 |
| KRH20846 | Soybean | nucleus | 33.25 | 30.82 |
| Solyc12g100140.1.1 | Tomato | nucleus | 33.25 | 30.0 |
| Zm00001d017138_P001 | Maize | nucleus | 23.89 | 29.85 |
| KRH43476 | Soybean | nucleus | 32.02 | 28.89 |
| Solyc11g056650.1.1 | Tomato | nucleus | 31.28 | 28.8 |
| PGSC0003DMT400056716 | Potato | nucleus | 31.28 | 28.8 |
| Zm00001d042482_P001 | Maize | nucleus | 25.62 | 28.73 |
| PGSC0003DMT400061284 | Potato | nucleus | 33.5 | 27.81 |
| KRH13908 | Soybean | extracellular, nucleus | 30.79 | 27.41 |
Protein Annotations
| EntrezGene:103647540 | MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A1D6ES35 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| ProteinID:ONM22548.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF55 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0004DE86BF | EnsemblPlantsGene:Zm00001d006022 | EnsemblPlants:Zm00001d006022_P001 | EnsemblPlants:Zm00001d006022_T001 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
bHLH-transcription factor 6Transcription factor bHLH130
Coordinates
chr2:+:195425336..195428897
Molecular Weight (calculated)
42359.9 Da
IEP (calculated)
8.575
GRAVY (calculated)
-0.568
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGAPVPKDL NLPAALPQPT RAGARTPPQQ QQQMSSAGLL RYRSAPSTLL GEVMCGDQDF PATDGGGGHG PPDHAATDNV LALFLAGHHS EARDCKPPRP
101: AAAAHFMDEA AASQQQQLMY QSQQQQQMAA MEGLYHNVSS GGTEHGAGVG AGNNSLIRQS SSPAGFLTNG YGGMLRAGMG MAGGFRNGVS DARLKGQLSF
201: PSRQGSVMSQ ISEVGSEELD GGGGGSPEAA GSNASGAPRG YVGIPGYPMG GGTSGAWSDE PSPSPTSGAK RRPRDSGPAP QNVQQQPLAP QLSLPSGGKP
301: ASAEMAAIEK FLQFQDAVPC KIRAKRGCAT HPRSIAERVR RTKISERIRK LQELVPNMEK QTNTADMLDL AVDYIKDLQK QVKVLNDGRA NCTCSGGGKL
401: QDPFTS
101: AAAAHFMDEA AASQQQQLMY QSQQQQQMAA MEGLYHNVSS GGTEHGAGVG AGNNSLIRQS SSPAGFLTNG YGGMLRAGMG MAGGFRNGVS DARLKGQLSF
201: PSRQGSVMSQ ISEVGSEELD GGGGGSPEAA GSNASGAPRG YVGIPGYPMG GGTSGAWSDE PSPSPTSGAK RRPRDSGPAP QNVQQQPLAP QLSLPSGGKP
301: ASAEMAAIEK FLQFQDAVPC KIRAKRGCAT HPRSIAERVR RTKISERIRK LQELVPNMEK QTNTADMLDL AVDYIKDLQK QVKVLNDGRA NCTCSGGGKL
401: QDPFTS
001: MESEFQQHHF LLHDHQHQRP RNSGLIRYQS APSSYFSSFG ESIEEFLDRP TSPETERILS GFLQTTDTSD NVDSFLHHTF NSDGTEKKPP EVKTEDEDAE
101: IPVTATATAM EVVVSGDGEI SVNPEVSIGY VASVSRNKRP REKDDRTPVN NLARHNSSPA GLFSSIDVET AYAAVMKSMG GFGGSNVMST SNTEASSLTP
201: RSKLLPPTSR AMSPISEVDV KPGFSSRLPP RTLSGGFNRS FGNEGSASSK LTALARTQSG GLDQYKTKDE DSASRRPPLA HHMSLPKSLS DIEQLLSDSI
301: PCKIRAKRGC ATHPRSIAER VRRTKISERM RKLQDLVPNM DTQTNTADML DLAVQYIKDL QEQVKALEES RARCRCSSA
101: IPVTATATAM EVVVSGDGEI SVNPEVSIGY VASVSRNKRP REKDDRTPVN NLARHNSSPA GLFSSIDVET AYAAVMKSMG GFGGSNVMST SNTEASSLTP
201: RSKLLPPTSR AMSPISEVDV KPGFSSRLPP RTLSGGFNRS FGNEGSASSK LTALARTQSG GLDQYKTKDE DSASRRPPLA HHMSLPKSLS DIEQLLSDSI
301: PCKIRAKRGC ATHPRSIAER VRRTKISERM RKLQDLVPNM DTQTNTADML DLAVQYIKDL QEQVKALEES RARCRCSSA
Arabidopsis Description
BHLH122Transcription factor bHLH122 [Source:UniProtKB/Swiss-Prot;Acc:Q9C690]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.