Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra004678.1-P | Field mustard | nucleus, plastid | 96.02 | 96.32 |
CDY53498 | Canola | nucleus, plastid | 93.58 | 94.15 |
CDY47961 | Canola | nucleus | 80.12 | 75.29 |
CDY14822 | Canola | nucleus | 79.2 | 75.07 |
AT2G42280.3 | Thale cress | nucleus | 77.68 | 70.56 |
Zm00001d023444_P001 | Maize | cytosol | 9.17 | 63.83 |
Zm00001d051122_P001 | Maize | nucleus | 23.55 | 50.66 |
CDY70200 | Canola | nucleus | 14.98 | 48.51 |
KRH71888 | Soybean | nucleus, plastid | 49.85 | 43.12 |
VIT_08s0007g07810.t01 | Wine grape | nucleus | 50.15 | 41.62 |
KRH33007 | Soybean | nucleus, plastid | 48.62 | 41.41 |
HORVU5Hr1G073170.5 | Barley | cytosol, nucleus, plastid | 22.94 | 40.98 |
Solyc10g079050.1.1 | Tomato | nucleus | 46.79 | 40.26 |
PGSC0003DMT400021062 | Potato | nucleus | 46.48 | 40.0 |
KRG95337 | Soybean | nucleus | 44.65 | 38.12 |
KRH67021 | Soybean | nucleus | 44.95 | 37.98 |
HORVU7Hr1G050530.1 | Barley | cytosol | 30.28 | 36.8 |
Zm00001d006578_P001 | Maize | nucleus | 41.28 | 36.78 |
CDY28415 | Canola | nucleus | 26.91 | 36.21 |
CDY69278 | Canola | nucleus | 26.61 | 35.95 |
CDY41870 | Canola | nucleus | 26.3 | 35.25 |
CDY42800 | Canola | nucleus | 21.71 | 34.98 |
CDX91761 | Canola | nucleus | 26.3 | 34.96 |
Zm00001d031441_P001 | Maize | nucleus | 40.37 | 34.74 |
CDY61281 | Canola | nucleus | 26.61 | 34.66 |
CDX83499 | Canola | nucleus | 21.41 | 34.48 |
TraesCS7A01G245800.1 | Wheat | nucleus | 40.06 | 34.2 |
Os08t0506700-01 | Rice | nucleus | 41.59 | 34.09 |
TraesCS7D01G244300.1 | Wheat | nucleus, plastid | 40.06 | 33.94 |
GSMUA_Achr7P20490_001 | Banana | nucleus | 36.09 | 33.62 |
TraesCS7B01G145800.1 | Wheat | nucleus, plastid | 39.76 | 33.59 |
CDY25213 | Canola | nucleus | 36.7 | 32.97 |
CDY22828 | Canola | nucleus | 36.09 | 32.69 |
Zm00001d021748_P001 | Maize | plastid | 37.0 | 32.35 |
Zm00001d006022_P001 | Maize | nucleus, plastid | 39.76 | 32.02 |
GSMUA_Achr5P22310_001 | Banana | nucleus | 37.31 | 31.52 |
Os09t0487900-01 | Rice | nucleus | 38.23 | 31.17 |
Zm00001d020932_P001 | Maize | nucleus | 38.53 | 30.88 |
GSMUA_Achr3P11110_001 | Banana | nucleus | 37.0 | 30.71 |
CDY51319 | Canola | nucleus, plastid | 33.33 | 30.28 |
TraesCS5B01G264300.1 | Wheat | plastid | 37.92 | 30.24 |
TraesCS5D01G272800.1 | Wheat | plastid | 38.23 | 30.12 |
HORVU2Hr1G073240.1 | Barley | cytosol | 14.98 | 29.88 |
TraesCS5A01G264800.1 | Wheat | plastid | 37.31 | 29.83 |
GSMUA_Achr9P27780_001 | Banana | nucleus | 37.61 | 29.64 |
CDY10149 | Canola | nucleus, plastid | 31.5 | 29.26 |
OQU80938 | Sorghum | nucleus | 41.59 | 29.25 |
CDY17944 | Canola | nucleus | 26.61 | 27.97 |
KXG35904 | Sorghum | nucleus, plastid | 37.92 | 27.93 |
CDY30384 | Canola | nucleus | 25.08 | 26.71 |
HORVU7Hr1G047180.1 | Barley | plastid | 19.27 | 25.1 |
CDY66632 | Canola | cytosol, nucleus, plastid | 12.54 | 24.85 |
CDY10155 | Canola | nucleus, plastid | 15.29 | 17.73 |
Protein Annotations
MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078CV19 | EnsemblPlants:CDX79884 | ProteinID:CDX79884 | ProteinID:CDX79884.1 |
ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00132736001 |
InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 |
PANTHER:PTHR16223:SF67 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EF388A | InterPro:bHLH_dom | SEG:seg |
Description
BnaA05g02720D
Coordinates
chrLK031819:-:694606..696255
Molecular Weight (calculated)
36811.1 Da
IEP (calculated)
7.222
GRAVY (calculated)
-0.826
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSNTQNHLY DPNHVSSSSG SGLLRFRSAP SSVLAAFVDD NDKTVFNSNE FENKSRVSYA AAPPPQQEPS SFLGLPPHYP KQSNGMMMMN TIGLDQFLSM
101: NNHHTRPVES HLLRQSSSPA GMFTNEQNGY GSMRSYVGEE EEEEESPSHP NGLRRHSSLS SRPPSSLGML SQIPEIDSES VQYSHWNHPS TSFIDNLSSL
201: KRETEDDGKL FHGAQIMSHH LSLPKSASDM GSVDKYLQLQ DSVPCKVRAK RGCATHPRSI AERVRRTKIS ERMRKLQELV PNMDKQTNTS DMLDLAVDYI
301: KDLQRQYKIL NENRANCKCV NKEKNLI
101: NNHHTRPVES HLLRQSSSPA GMFTNEQNGY GSMRSYVGEE EEEEESPSHP NGLRRHSSLS SRPPSSLGML SQIPEIDSES VQYSHWNHPS TSFIDNLSSL
201: KRETEDDGKL FHGAQIMSHH LSLPKSASDM GSVDKYLQLQ DSVPCKVRAK RGCATHPRSI AERVRRTKIS ERMRKLQELV PNMDKQTNTS DMLDLAVDYI
301: KDLQRQYKIL NENRANCKCV NKEKNLI
001: MDSNNHLYDP NPTGSGLLRF RSAPSSVLAA FVDDDKIGFD SDRLLSRFVT SNGVNGDLGS PKFEDKSPVS LTNTSVSYAA TLPPPPQLEP SSFLGLPPHY
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK ILNDNRANCK CMNKEKKSI
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK ILNDNRANCK CMNKEKKSI
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G42280]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.