Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42800 | Canola | nucleus | 72.73 | 59.11 |
| CDX83499 | Canola | nucleus | 72.12 | 58.62 |
| Bra004748.1-P | Field mustard | nucleus | 89.7 | 48.37 |
| CDY17944 | Canola | nucleus | 89.09 | 47.27 |
| CDY30384 | Canola | nucleus | 75.15 | 40.39 |
| AT2G43140.2 | Thale cress | nucleus | 74.55 | 39.81 |
| CDY70200 | Canola | nucleus | 24.24 | 39.6 |
| Os02t0603600-01 | Rice | nucleus | 25.45 | 23.73 |
| KRG93108 | Soybean | extracellular | 36.36 | 20.98 |
| VIT_05s0124g00240.t01 | Wine grape | plastid | 41.82 | 19.55 |
| KXG26599 | Sorghum | nucleus | 23.64 | 19.31 |
| GSMUA_Achr6P21220_001 | Banana | vacuole | 32.12 | 19.0 |
| PGSC0003DMT400016793 | Potato | nucleus, plastid | 38.18 | 18.1 |
| CDY51319 | Canola | nucleus, plastid | 39.39 | 18.06 |
| CDY10149 | Canola | nucleus, plastid | 37.58 | 17.61 |
| GSMUA_Achr1P27710_001 | Banana | nucleus | 35.76 | 17.61 |
| GSMUA_Achr8P01370_001 | Banana | nucleus | 33.33 | 17.03 |
| Solyc09g098110.2.1 | Tomato | nucleus, plastid | 35.76 | 16.53 |
| TraesCS6B01G244800.1 | Wheat | nucleus | 28.48 | 15.51 |
| TraesCS6D01G197500.1 | Wheat | nucleus | 28.48 | 15.26 |
| Zm00001d017138_P001 | Maize | nucleus | 29.7 | 15.08 |
| TraesCS6A01G214900.1 | Wheat | nucleus | 28.48 | 14.97 |
| HORVU6Hr1G054910.7 | Barley | nucleus | 29.09 | 14.81 |
| Os04t0489600-02 | Rice | nucleus | 32.73 | 14.63 |
| Zm00001d042482_P001 | Maize | nucleus | 30.91 | 14.09 |
| CDY28415 | Canola | nucleus | 20.61 | 13.99 |
| EES05388 | Sorghum | nucleus | 28.48 | 13.91 |
| CDY10155 | Canola | nucleus, plastid | 23.64 | 13.83 |
| Os01t0900800-01 | Rice | nucleus | 32.12 | 13.7 |
| CDY69278 | Canola | nucleus | 20.0 | 13.64 |
| TraesCS3D01G388700.1 | Wheat | nucleus | 29.7 | 13.39 |
| CDY41870 | Canola | nucleus | 19.39 | 13.11 |
| CDX91761 | Canola | nucleus | 19.39 | 13.01 |
| TraesCS3B01G426900.1 | Wheat | nucleus | 29.09 | 12.94 |
| GSMUA_Achr8P32130_001 | Banana | mitochondrion | 32.73 | 12.8 |
| CDY61281 | Canola | nucleus | 19.39 | 12.75 |
| CDX79884 | Canola | nucleus, plastid | 24.85 | 12.54 |
| HORVU3Hr1G089090.2 | Barley | nucleus | 28.48 | 12.43 |
| TraesCS3A01G395000.1 | Wheat | nucleus | 27.88 | 12.4 |
| CDY47961 | Canola | nucleus | 26.06 | 12.36 |
| CDY14822 | Canola | nucleus | 25.45 | 12.17 |
| KXG33923 | Sorghum | plastid | 30.3 | 11.47 |
| CDY53498 | Canola | nucleus, plastid | 22.42 | 11.38 |
| CDY22828 | Canola | nucleus | 24.24 | 11.08 |
| CDY25213 | Canola | nucleus | 24.24 | 10.99 |
Protein Annotations
| EnsemblPlants:CDY66632 | EnsemblPlantsGene:GSBRNA2T00054679001 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF51 | ProteinID:CDY66632 | ProteinID:CDY66632.1 |
| SEG:seg | UniParc:UPI0004EDDD71 | UniProt:A0A078JMN7 | MapMan:35.1 | : | : |
Description
BnaAnng22630DBnaAnng22630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMN7]
Coordinates
chrLK035370:+:13350..16253
Molecular Weight (calculated)
18038.1 Da
IEP (calculated)
6.113
GRAVY (calculated)
-0.614
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MDERTGFSLG RPNGGYGGGE RGPSGLKPEL RFSGGSSSSS HQERNSLQRI SEVEAAAAAI KGVPSTSMTF GNDHNNWDNS SSHISFTIDE PGKRSKTTDF
101: FTLETQFSMP QTSLEMARME SMMNIPEDSV PCRTRAKRGC ATHPRSIAER VSCILLFDII ITTEE
101: FTLETQFSMP QTSLEMARME SMMNIPEDSV PCRTRAKRGC ATHPRSIAER VSCILLFDII ITTEE
001: MEEGTGFSLG RPNGGYGGGG EQGPSRLKSE LRFSSGSSSH QEHNSLPRIS EVEAAAAARN GVASSSMSFG NNRTNNWDNS SSHISFTIDQ PGKRSKNSDF
101: FTLETQYSMP QTTLEMATME NLMNIPEDSV PCRARAKRGF ATHPRSIAER ERRTRISGKL KKLQELVPNM DKQTSYADML DLAVEHIKGL QHQVESLEKG
201: MERCTCGACK KR
101: FTLETQYSMP QTTLEMATME NLMNIPEDSV PCRARAKRGF ATHPRSIAER ERRTRISGKL KKLQELVPNM DKQTSYADML DLAVEHIKGL QHQVESLEKG
201: MERCTCGACK KR
Arabidopsis Description
Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IQ66]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.