Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- mitochondrion 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10149 | Canola | nucleus, plastid | 89.72 | 71.88 |
| CDY51319 | Canola | nucleus, plastid | 91.13 | 71.39 |
| AT1G05805.1 | Thale cress | nucleus, plastid | 77.66 | 60.5 |
| VIT_05s0124g00240.t01 | Wine grape | plastid | 39.36 | 31.44 |
| KRG93108 | Soybean | extracellular | 29.08 | 28.67 |
| Solyc09g098110.2.1 | Tomato | nucleus, plastid | 34.4 | 27.17 |
| PGSC0003DMT400016793 | Potato | nucleus, plastid | 31.56 | 25.57 |
| CDY30384 | Canola | nucleus | 26.95 | 24.76 |
| CDY66632 | Canola | cytosol, nucleus, plastid | 13.83 | 23.64 |
| CDY17944 | Canola | nucleus | 25.89 | 23.47 |
| GSMUA_Achr1P27710_001 | Banana | nucleus | 27.66 | 23.28 |
| GSMUA_Achr8P01370_001 | Banana | nucleus | 25.89 | 22.6 |
| Zm00001d042482_P001 | Maize | nucleus | 27.3 | 21.27 |
| TraesCS6B01G244800.1 | Wheat | nucleus | 22.7 | 21.12 |
| TraesCS6D01G197500.1 | Wheat | nucleus | 22.7 | 20.78 |
| CDX83499 | Canola | nucleus | 14.89 | 20.69 |
| TraesCS6A01G214900.1 | Wheat | nucleus | 22.7 | 20.38 |
| CDY42800 | Canola | nucleus | 14.54 | 20.2 |
| HORVU6Hr1G054910.7 | Barley | nucleus | 22.7 | 19.75 |
| Os01t0900800-01 | Rice | nucleus | 26.6 | 19.38 |
| TraesCS3D01G388700.1 | Wheat | nucleus | 24.11 | 18.58 |
| TraesCS3A01G395000.1 | Wheat | nucleus | 24.11 | 18.33 |
| TraesCS3B01G426900.1 | Wheat | nucleus | 24.11 | 18.33 |
| HORVU3Hr1G089090.2 | Barley | nucleus | 24.47 | 18.25 |
| GSMUA_Achr8P32130_001 | Banana | mitochondrion | 26.95 | 18.01 |
| KXG33923 | Sorghum | plastid | 26.6 | 17.2 |
| Zm00001d017138_P001 | Maize | nucleus | 19.15 | 16.62 |
| GSMUA_Achr6P21220_001 | Banana | vacuole | 16.31 | 16.49 |
| Os02t0603600-01 | Rice | nucleus | 10.28 | 16.38 |
| CDY53498 | Canola | nucleus, plastid | 18.44 | 16.0 |
| CDY47961 | Canola | nucleus | 19.5 | 15.8 |
| Os04t0489600-02 | Rice | nucleus | 20.57 | 15.72 |
| EES05388 | Sorghum | nucleus | 18.79 | 15.68 |
| CDY14822 | Canola | nucleus | 19.15 | 15.65 |
| CDX79884 | Canola | nucleus, plastid | 17.73 | 15.29 |
| CDY28415 | Canola | nucleus | 13.12 | 15.23 |
| CDY69278 | Canola | nucleus | 12.41 | 14.46 |
| CDY41870 | Canola | nucleus | 12.41 | 14.34 |
| CDY61281 | Canola | nucleus | 12.77 | 14.34 |
| CDY22828 | Canola | nucleus | 17.38 | 13.57 |
| CDY25213 | Canola | nucleus | 17.38 | 13.46 |
| CDX91761 | Canola | nucleus | 11.7 | 13.41 |
| KXG26599 | Sorghum | nucleus | 8.51 | 11.88 |
| CDY70200 | Canola | nucleus | 2.84 | 7.92 |
Protein Annotations
| EnsemblPlants:CDY10155 | EnsemblPlantsGene:GSBRNA2T00031969001 | GO:A0A078F6Q5 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR16223 | PANTHER:PTHR16223:SF51 | ProteinID:CDY10155 | ProteinID:CDY10155.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EDCD6C | UniProt:A0A078F6Q5 | MapMan:35.1 | : | : | : |
Description
BnaC05g03980DBnaC05g03980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6Q5]
Coordinates
chrLK032001:+:306833..308620
Molecular Weight (calculated)
30179.4 Da
IEP (calculated)
6.877
GRAVY (calculated)
-0.578
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQSSSPTSS SSQRSSLPSG GAGLIRYGSA PGSLLNSMVD EVIGGSNGRD FNFPPPDNFL GDFFAGADSS SLRSESMTCG VNSSDGQKHL GSNNNNNNNN
101: NNKDLLLDRS YGGFNEISQH KINNHVGGGG SSSGSYSLAR QRSSPADFFS YLSGEKNNFS LNQPTSDYNQ QGGSNAGRGP SRLKSQLSFT SHDPLSRISE
201: VNETSVHDGS GHSFSAASFG AATDSWDDGS GSIGFTVTRP TKRPKDMNSG LFSQVNYFVL IWGYTVHYLI FCQRLIISYM LC
101: NNKDLLLDRS YGGFNEISQH KINNHVGGGG SSSGSYSLAR QRSSPADFFS YLSGEKNNFS LNQPTSDYNQ QGGSNAGRGP SRLKSQLSFT SHDPLSRISE
201: VNETSVHDGS GHSFSAASFG AATDSWDDGS GSIGFTVTRP TKRPKDMNSG LFSQVNYFVL IWGYTVHYLI FCQRLIISYM LC
001: MYQSSSSTSS SSQRSSLPGG GGLIRYGSAP GSFLNSVVDE VIGGGSSNAR DFTGYQPSSD NFIGNFFTGA ADSSSLRSDS TTCGVNNSSD GQKQLGNNNN
101: NNSNKDIFLD RSYGGFNEIS QQHKSNDIGG GNSSGSYSLA RQRSSPADFF TYLASDKNNF SLNQPTSDYS PQGGSNGGRG HSRLKSQLSF TNHDSLARIN
201: EVNETPVHDG SGHSFSAASF GAATTDSWDD GSGSIGFTVT RPSKRSKDMD SGLFSQYSLP SDTSMNYMDN FMQLPEDSVP CKIRAKRGCA THPRSIAERE
301: RRTRISGKLK KLQDLVPNMD KQTSYSDMLD LAVQHIKGLQ HQLQNLKKDQ ENCTCGCSEK PS
101: NNSNKDIFLD RSYGGFNEIS QQHKSNDIGG GNSSGSYSLA RQRSSPADFF TYLASDKNNF SLNQPTSDYS PQGGSNGGRG HSRLKSQLSF TNHDSLARIN
201: EVNETPVHDG SGHSFSAASF GAATTDSWDD GSGSIGFTVT RPSKRSKDMD SGLFSQYSLP SDTSMNYMDN FMQLPEDSVP CKIRAKRGCA THPRSIAERE
301: RRTRISGKLK KLQDLVPNMD KQTSYSDMLD LAVQHIKGLQ HQLQNLKKDQ ENCTCGCSEK PS
Arabidopsis Description
BHLH128Transcription factor bHLH128 [Source:UniProtKB/Swiss-Prot;Acc:Q8H102]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.