Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- mitochondrion 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51319 | Canola | nucleus, plastid | 94.6 | 92.5 |
| CDY10155 | Canola | nucleus, plastid | 71.88 | 89.72 |
| AT1G05805.1 | Thale cress | nucleus, plastid | 82.95 | 80.66 |
| CDY70200 | Canola | nucleus | 17.05 | 59.41 |
| KRG93108 | Soybean | extracellular | 40.34 | 49.65 |
| CDX83499 | Canola | nucleus | 27.56 | 47.78 |
| VIT_05s0124g00240.t01 | Wine grape | plastid | 47.73 | 47.59 |
| CDY42800 | Canola | nucleus | 27.27 | 47.29 |
| Solyc09g098110.2.1 | Tomato | nucleus, plastid | 42.9 | 42.3 |
| CDY17944 | Canola | nucleus | 36.93 | 41.8 |
| PGSC0003DMT400016793 | Potato | nucleus, plastid | 40.91 | 41.38 |
| CDY30384 | Canola | nucleus | 36.08 | 41.37 |
| TraesCS6B01G244800.1 | Wheat | nucleus | 34.09 | 39.6 |
| GSMUA_Achr1P27710_001 | Banana | nucleus | 37.5 | 39.4 |
| TraesCS6D01G197500.1 | Wheat | nucleus | 34.09 | 38.96 |
| TraesCS6A01G214900.1 | Wheat | nucleus | 34.09 | 38.22 |
| GSMUA_Achr8P01370_001 | Banana | nucleus | 34.66 | 37.77 |
| CDY66632 | Canola | cytosol, nucleus, plastid | 17.61 | 37.58 |
| HORVU6Hr1G054910.7 | Barley | nucleus | 34.09 | 37.04 |
| GSMUA_Achr6P21220_001 | Banana | vacuole | 28.98 | 36.56 |
| Zm00001d042482_P001 | Maize | nucleus | 36.08 | 35.08 |
| KXG26599 | Sorghum | nucleus | 19.89 | 34.65 |
| CDY28415 | Canola | nucleus | 23.3 | 33.74 |
| Zm00001d017138_P001 | Maize | nucleus | 30.97 | 33.54 |
| CDY41870 | Canola | nucleus | 23.01 | 33.2 |
| CDY69278 | Canola | nucleus | 22.73 | 33.06 |
| Os01t0900800-01 | Rice | nucleus | 35.8 | 32.56 |
| EES05388 | Sorghum | nucleus | 31.25 | 32.54 |
| CDY61281 | Canola | nucleus | 23.01 | 32.27 |
| CDX91761 | Canola | nucleus | 22.44 | 32.11 |
| TraesCS3D01G388700.1 | Wheat | nucleus | 33.24 | 31.97 |
| TraesCS3B01G426900.1 | Wheat | nucleus | 33.24 | 31.54 |
| TraesCS3A01G395000.1 | Wheat | nucleus | 33.24 | 31.54 |
| CDX79884 | Canola | nucleus, plastid | 29.26 | 31.5 |
| CDY53498 | Canola | nucleus, plastid | 28.98 | 31.38 |
| HORVU3Hr1G089090.2 | Barley | nucleus | 33.52 | 31.22 |
| GSMUA_Achr8P32130_001 | Banana | mitochondrion | 36.65 | 30.57 |
| CDY47961 | Canola | nucleus | 30.11 | 30.46 |
| CDY14822 | Canola | nucleus | 29.83 | 30.43 |
| Os02t0603600-01 | Rice | nucleus | 14.77 | 29.38 |
| Os04t0489600-02 | Rice | nucleus | 30.4 | 29.0 |
| KXG33923 | Sorghum | plastid | 35.8 | 28.9 |
| CDY22828 | Canola | nucleus | 27.56 | 26.87 |
| CDY25213 | Canola | nucleus | 27.56 | 26.65 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078FAU6 | UniProt:A0A078FAU6 | EnsemblPlants:CDY10149 | ProteinID:CDY10149 |
| ProteinID:CDY10149.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00031962001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 |
| PANTHER:PTHR16223:SF51 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE489C | InterPro:bHLH_dom | SEG:seg |
Description
BnaC05g03920DBnaC05g03920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAU6]
Coordinates
chrLK032001:+:273146..277418
Molecular Weight (calculated)
37982.6 Da
IEP (calculated)
9.145
GRAVY (calculated)
-0.759
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQSSSSTSS SSQRSSLPGG GGGGAGLIRY GSAPGSLLNS MVDEVIGGSN GRDFNYPPPD NFLGDFFAGA DSSSLRSESM TCGVNSSDGQ KHLVNNNNNN
101: SNKDLLLDRS YGGFNEISQH KINNHVGGGG SSSGSYSLAR QRSSPADFFS YLSGEKNNFS SNQPTSDYNQ QGGSNAGRGP SRLKSQLSFT SHDPLARISE
201: VNETSVHYGS GHSFSAASFG AATDSWDDGS GSTGFTVTRP TKRPKDMNSG LFSQYSLPSD TSMNYMDNYM QLPEDSVPCK VRAKRGFATH PRSIAERERR
301: TRISGRLKKL QDLVPNMDKQ TSYSDMLDLA VQHIKGLQHQ LQVPYKTINR LI
101: SNKDLLLDRS YGGFNEISQH KINNHVGGGG SSSGSYSLAR QRSSPADFFS YLSGEKNNFS SNQPTSDYNQ QGGSNAGRGP SRLKSQLSFT SHDPLARISE
201: VNETSVHYGS GHSFSAASFG AATDSWDDGS GSTGFTVTRP TKRPKDMNSG LFSQYSLPSD TSMNYMDNYM QLPEDSVPCK VRAKRGFATH PRSIAERERR
301: TRISGRLKKL QDLVPNMDKQ TSYSDMLDLA VQHIKGLQHQ LQVPYKTINR LI
001: MYQSSSSTSS SSQRSSLPGG GGLIRYGSAP GSFLNSVVDE VIGGGSSNAR DFTGYQPSSD NFIGNFFTGA ADSSSLRSDS TTCGVNNSSD GQKQLGNNNN
101: NNSNKDIFLD RSYGGFNEIS QQHKSNDIGG GNSSGSYSLA RQRSSPADFF TYLASDKNNF SLNQPTSDYS PQGGSNGGRG HSRLKSQLSF TNHDSLARIN
201: EVNETPVHDG SGHSFSAASF GAATTDSWDD GSGSIGFTVT RPSKRSKDMD SGLFSQYSLP SDTSMNYMDN FMQLPEDSVP CKIRAKRGCA THPRSIAERE
301: RRTRISGKLK KLQDLVPNMD KQTSYSDMLD LAVQHIKGLQ HQLQNLKKDQ ENCTCGCSEK PS
101: NNSNKDIFLD RSYGGFNEIS QQHKSNDIGG GNSSGSYSLA RQRSSPADFF TYLASDKNNF SLNQPTSDYS PQGGSNGGRG HSRLKSQLSF TNHDSLARIN
201: EVNETPVHDG SGHSFSAASF GAATTDSWDD GSGSIGFTVT RPSKRSKDMD SGLFSQYSLP SDTSMNYMDN FMQLPEDSVP CKIRAKRGCA THPRSIAERE
301: RRTRISGKLK KLQDLVPNMD KQTSYSDMLD LAVQHIKGLQ HQLQNLKKDQ ENCTCGCSEK PS
Arabidopsis Description
BHLH128Transcription factor bHLH128 [Source:UniProtKB/Swiss-Prot;Acc:Q8H102]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.