Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra015456.1-P | Field mustard | nucleus, plastid | 84.81 | 85.28 |
CDY51319 | Canola | nucleus, plastid | 84.53 | 85.0 |
CDY10149 | Canola | nucleus, plastid | 80.66 | 82.95 |
CDY10155 | Canola | nucleus, plastid | 60.5 | 77.66 |
KRG93108 | Soybean | extracellular | 42.54 | 53.85 |
VIT_05s0124g00240.t01 | Wine grape | plastid | 50.28 | 51.56 |
AT2G43140.2 | Thale cress | nucleus | 40.06 | 46.93 |
Solyc09g098110.2.1 | Tomato | nucleus, plastid | 46.13 | 46.78 |
PGSC0003DMT400016793 | Potato | nucleus, plastid | 43.37 | 45.11 |
GSMUA_Achr1P27710_001 | Banana | nucleus | 38.67 | 41.79 |
TraesCS6B01G244800.1 | Wheat | nucleus | 33.43 | 39.93 |
GSMUA_Achr6P21220_001 | Banana | vacuole | 30.39 | 39.43 |
TraesCS6D01G197500.1 | Wheat | nucleus | 33.43 | 39.29 |
GSMUA_Achr8P01370_001 | Banana | nucleus | 34.53 | 38.7 |
KXG26599 | Sorghum | nucleus | 21.55 | 38.61 |
TraesCS6A01G214900.1 | Wheat | nucleus | 33.43 | 38.53 |
HORVU6Hr1G054910.7 | Barley | nucleus | 32.6 | 36.42 |
Os01t0900800-01 | Rice | nucleus | 37.85 | 35.4 |
Zm00001d042482_P001 | Maize | nucleus | 35.36 | 35.36 |
TraesCS3D01G388700.1 | Wheat | nucleus | 34.25 | 33.88 |
Zm00001d017138_P001 | Maize | nucleus | 30.39 | 33.85 |
AT4G09180.1 | Thale cress | nucleus | 24.31 | 33.59 |
TraesCS3A01G395000.1 | Wheat | nucleus | 34.25 | 33.42 |
TraesCS3B01G426900.1 | Wheat | nucleus | 34.25 | 33.42 |
AT1G35460.1 | Thale cress | nucleus | 23.76 | 33.2 |
HORVU3Hr1G089090.2 | Barley | nucleus | 34.53 | 33.07 |
EES05388 | Sorghum | nucleus | 30.66 | 32.84 |
GSMUA_Achr8P32130_001 | Banana | mitochondrion | 37.29 | 31.99 |
Os04t0489600-02 | Rice | nucleus | 31.22 | 30.62 |
AT2G42280.3 | Thale cress | nucleus | 29.56 | 29.72 |
KXG33923 | Sorghum | plastid | 35.64 | 29.59 |
Os02t0603600-01 | Rice | nucleus | 14.09 | 28.81 |
AT1G51140.1 | Thale cress | nucleus | 29.28 | 27.97 |
Protein Annotations
MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:837090 | UniProt:A0A178W6Y0 | ProteinID:AAF29386.1 | ProteinID:AEE27896.1 |
ArrayExpress:AT1G05805 | EnsemblPlantsGene:AT1G05805 | RefSeq:AT1G05805 | TAIR:AT1G05805 | RefSeq:AT1G05805-TAIR-G | EnsemblPlants:AT1G05805.1 |
TAIR:AT1G05805.1 | EMBL:AY086106 | EMBL:BT000954 | ncoils:Coil | GO:GO:0001046 | GO:GO:0001228 |
GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 |
GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006366 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010119 | GO:GO:0044212 | GO:GO:0045944 | GO:GO:0046983 |
InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | RefSeq:NP_563749.1 | ProteinID:OAP13481.1 | PFAM:PF00010 |
PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
PO:PO:0025281 | PFscan:PS50888 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF51 | UniProt:Q8H102 | SMART:SM00353 |
SUPFAM:SSF47459 | UniParc:UPI00000ADB1D | InterPro:bHLH_dom | SEG:seg | : | : |
Description
BHLH128Transcription factor bHLH128 [Source:UniProtKB/Swiss-Prot;Acc:Q8H102]
Coordinates
chr1:+:1744444..1747734
Molecular Weight (calculated)
38953.3 Da
IEP (calculated)
7.529
GRAVY (calculated)
-0.831
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQSSSSTSS SSQRSSLPGG GGLIRYGSAP GSFLNSVVDE VIGGGSSNAR DFTGYQPSSD NFIGNFFTGA ADSSSLRSDS TTCGVNNSSD GQKQLGNNNN
101: NNSNKDIFLD RSYGGFNEIS QQHKSNDIGG GNSSGSYSLA RQRSSPADFF TYLASDKNNF SLNQPTSDYS PQGGSNGGRG HSRLKSQLSF TNHDSLARIN
201: EVNETPVHDG SGHSFSAASF GAATTDSWDD GSGSIGFTVT RPSKRSKDMD SGLFSQYSLP SDTSMNYMDN FMQLPEDSVP CKIRAKRGCA THPRSIAERE
301: RRTRISGKLK KLQDLVPNMD KQTSYSDMLD LAVQHIKGLQ HQLQNLKKDQ ENCTCGCSEK PS
101: NNSNKDIFLD RSYGGFNEIS QQHKSNDIGG GNSSGSYSLA RQRSSPADFF TYLASDKNNF SLNQPTSDYS PQGGSNGGRG HSRLKSQLSF TNHDSLARIN
201: EVNETPVHDG SGHSFSAASF GAATTDSWDD GSGSIGFTVT RPSKRSKDMD SGLFSQYSLP SDTSMNYMDN FMQLPEDSVP CKIRAKRGCA THPRSIAERE
301: RRTRISGKLK KLQDLVPNMD KQTSYSDMLD LAVQHIKGLQ HQLQNLKKDQ ENCTCGCSEK PS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.