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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 3
  • plastid 3
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra015456.1-P Field mustard nucleus, plastid 84.81 85.28
CDY51319 Canola nucleus, plastid 84.53 85.0
CDY10149 Canola nucleus, plastid 80.66 82.95
CDY10155 Canola nucleus, plastid 60.5 77.66
KRG93108 Soybean extracellular 42.54 53.85
VIT_05s0124g00240.t01 Wine grape plastid 50.28 51.56
AT2G43140.2 Thale cress nucleus 40.06 46.93
Solyc09g098110.2.1 Tomato nucleus, plastid 46.13 46.78
PGSC0003DMT400016793 Potato nucleus, plastid 43.37 45.11
GSMUA_Achr1P27710_001 Banana nucleus 38.67 41.79
TraesCS6B01G244800.1 Wheat nucleus 33.43 39.93
GSMUA_Achr6P21220_001 Banana vacuole 30.39 39.43
TraesCS6D01G197500.1 Wheat nucleus 33.43 39.29
GSMUA_Achr8P01370_001 Banana nucleus 34.53 38.7
KXG26599 Sorghum nucleus 21.55 38.61
TraesCS6A01G214900.1 Wheat nucleus 33.43 38.53
HORVU6Hr1G054910.7 Barley nucleus 32.6 36.42
Os01t0900800-01 Rice nucleus 37.85 35.4
Zm00001d042482_P001 Maize nucleus 35.36 35.36
TraesCS3D01G388700.1 Wheat nucleus 34.25 33.88
Zm00001d017138_P001 Maize nucleus 30.39 33.85
AT4G09180.1 Thale cress nucleus 24.31 33.59
TraesCS3A01G395000.1 Wheat nucleus 34.25 33.42
TraesCS3B01G426900.1 Wheat nucleus 34.25 33.42
AT1G35460.1 Thale cress nucleus 23.76 33.2
HORVU3Hr1G089090.2 Barley nucleus 34.53 33.07
EES05388 Sorghum nucleus 30.66 32.84
GSMUA_Achr8P32130_001 Banana mitochondrion 37.29 31.99
Os04t0489600-02 Rice nucleus 31.22 30.62
AT2G42280.3 Thale cress nucleus 29.56 29.72
KXG33923 Sorghum plastid 35.64 29.59
Os02t0603600-01 Rice nucleus 14.09 28.81
AT1G51140.1 Thale cress nucleus 29.28 27.97
Protein Annotations
MapMan:15.5.32Gene3D:4.10.280.10EntrezGene:837090UniProt:A0A178W6Y0ProteinID:AAF29386.1ProteinID:AEE27896.1
ArrayExpress:AT1G05805EnsemblPlantsGene:AT1G05805RefSeq:AT1G05805TAIR:AT1G05805RefSeq:AT1G05805-TAIR-GEnsemblPlants:AT1G05805.1
TAIR:AT1G05805.1EMBL:AY086106EMBL:BT000954ncoils:CoilGO:GO:0001046GO:GO:0001228
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005829
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0006366GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0010119GO:GO:0044212GO:GO:0045944GO:GO:0046983
InterPro:HLH_DNA-bd_sfInterPro:IPR011598InterPro:IPR036638RefSeq:NP_563749.1ProteinID:OAP13481.1PFAM:PF00010
PO:PO:0000005PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PO:PO:0025281PFscan:PS50888PANTHER:PTHR16223PANTHER:PTHR16223:SF51UniProt:Q8H102SMART:SM00353
SUPFAM:SSF47459UniParc:UPI00000ADB1DInterPro:bHLH_domSEG:seg::
Description
BHLH128Transcription factor bHLH128 [Source:UniProtKB/Swiss-Prot;Acc:Q8H102]
Coordinates
chr1:+:1744444..1747734
Molecular Weight (calculated)
38953.3 Da
IEP (calculated)
7.529
GRAVY (calculated)
-0.831
Length
362 amino acids
Sequence
(BLAST)
001: MYQSSSSTSS SSQRSSLPGG GGLIRYGSAP GSFLNSVVDE VIGGGSSNAR DFTGYQPSSD NFIGNFFTGA ADSSSLRSDS TTCGVNNSSD GQKQLGNNNN
101: NNSNKDIFLD RSYGGFNEIS QQHKSNDIGG GNSSGSYSLA RQRSSPADFF TYLASDKNNF SLNQPTSDYS PQGGSNGGRG HSRLKSQLSF TNHDSLARIN
201: EVNETPVHDG SGHSFSAASF GAATTDSWDD GSGSIGFTVT RPSKRSKDMD SGLFSQYSLP SDTSMNYMDN FMQLPEDSVP CKIRAKRGCA THPRSIAERE
301: RRTRISGKLK KLQDLVPNMD KQTSYSDMLD LAVQHIKGLQ HQLQNLKKDQ ENCTCGCSEK PS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.