Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G35460.1 | Thale cress | nucleus | 74.43 | 75.29 |
| KRH44925 | Soybean | nucleus | 38.55 | 64.33 |
| VIT_18s0041g00690.t01 | Wine grape | mitochondrion, nucleus | 56.11 | 58.57 |
| Solyc06g065040.2.1 | Tomato | nucleus | 55.34 | 57.09 |
| PGSC0003DMT400080418 | Potato | mitochondrion, nucleus | 53.44 | 53.85 |
| AT2G43140.2 | Thale cress | nucleus | 30.53 | 25.89 |
| AT1G05805.1 | Thale cress | nucleus, plastid | 33.59 | 24.31 |
| AT2G42280.3 | Thale cress | nucleus | 33.21 | 24.17 |
| AT1G51140.1 | Thale cress | nucleus | 29.77 | 20.58 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:826499 | UniProt:A0A178UYK3 | ProteinID:AEE82732.1 | EMBL:AF488613 |
| EMBL:AK230384 | ArrayExpress:AT4G09180 | EnsemblPlantsGene:AT4G09180 | RefSeq:AT4G09180 | TAIR:AT4G09180 | RefSeq:AT4G09180-TAIR-G |
| EnsemblPlants:AT4G09180.1 | TAIR:AT4G09180.1 | EMBL:BT010423 | ProteinID:CAB78042.1 | ncoils:Coil | GO:GO:0001046 |
| GO:GO:0001228 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006366 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| RefSeq:NP_192657.1 | ProteinID:OAO98695.1 | PFAM:PF00010 | PO:PO:0000293 | PFscan:PS50888 | PANTHER:PTHR16223 |
| PANTHER:PTHR16223:SF104 | UniProt:Q9M0R0 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00000A54D7 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BHLH81Transcription factor bHLH81 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R0]
Coordinates
chr4:+:5847312..5849763
Molecular Weight (calculated)
28692.5 Da
IEP (calculated)
4.683
GRAVY (calculated)
-0.703
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPTSVGSSG GGDDGGGRGG GGGLSRSGLS RIRSAPATWL EALLEEDEEE SLKPNLGLTD LLTGNSNDLP TSRGSFEFPI PVEQGLYQQG GFHRQNSTPA
101: DFLSGSDGFI QSFGIQANYD YLSGNIDVSP GSKRSREMEA LFSSPEFTSQ MKGEQSSGQV PTGVSSMSDM NMENLMEDSV AFRVRAKRGC ATHPRSIAER
201: VRRTRISDRI RKLQELVPNM DKQTNTADML EEAVEYVKVL QRQIQELTEE QKRCTCIPKE EQ
101: DFLSGSDGFI QSFGIQANYD YLSGNIDVSP GSKRSREMEA LFSSPEFTSQ MKGEQSSGQV PTGVSSMSDM NMENLMEDSV AFRVRAKRGC ATHPRSIAER
201: VRRTRISDRI RKLQELVPNM DKQTNTADML EEAVEYVKVL QRQIQELTEE QKRCTCIPKE EQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.