Factsheet for Solyc06g065040.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400080418	Potato	mitochondrion, nucleus	92.91	90.77
KRH44925	Soybean	nucleus	35.83	57.96
VIT_18s0041g00690.t01	Wine grape	mitochondrion, nucleus	56.69	57.37
CDY41870	Canola	nucleus	54.72	56.97
CDX91761	Canola	nucleus	54.72	56.5
AT1G35460.1	Thale cress	nucleus	57.48	56.37
CDY69278	Canola	nucleus	53.15	55.79
AT4G09180.1	Thale cress	nucleus	57.09	55.34
CDY28415	Canola	nucleus	52.76	55.14
Bra034421.1-P	Field mustard	nucleus	52.76	55.14
CDY61281	Canola	nucleus	54.33	54.98
Bra036760.1-P	Field mustard	nucleus	51.57	54.81
Bra028088.1-P	Field mustard	nucleus	51.97	49.62
Solyc10g079050.1.1	Tomato	nucleus	38.98	26.05
Solyc01g086870.2.1	Tomato	nucleus	37.4	23.34
Solyc09g098110.2.1	Tomato	nucleus, plastid	31.89	22.69
Solyc12g100140.1.1	Tomato	nucleus	36.61	20.67
Solyc11g056650.1.1	Tomato	nucleus	35.83	20.63

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	ncoils:Coil	GO:GO:0001046	GO:GO:0001228	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006366	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045944	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	UniProt:K4C7D3	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR16223
PANTHER:PTHR16223:SF104	SMART:SM00353	SUPFAM:SSF47459	EnsemblPlantsGene:Solyc06g065040.2	EnsemblPlants:Solyc06g065040.2.1	UniParc:UPI00027672A1
InterPro:bHLH_dom	SEG:seg	:	:	:	:

Description

Transcription factor bHLH81 [Source:Projected from Arabidopsis thaliana (AT4G09180) UniProtKB/Swiss-Prot;Acc:Q9M0R0]

Coordinates

chr6:+:40556116..40560821

Molecular Weight (calculated)

27881.6 Da

IEP (calculated)

6.789

GRAVY (calculated)

-0.752

Length

254 amino acids

Sequence
(BLAST)

001: MQRGTTGDGG GGLSRFRSAP ATWLEALLES DTESEVILNP SSPILHTPNK PPPHPSTPKL KLETGGATRF TGDPGLFESG GSSNFLRQNS SPAEFLSHIS
101: SDGYFSNYGI PSSLDYLSPS VDVSQSAKRT RDDDSESSPR KLVSQLKGES SGQLHGSGGS LDAEMENLMD DLVPCKVRAK RGCATHPRSI AERVRRTRIS
201: DRIRKLQELV PNMDKQTNTA DMLEEAVEYV KFLQRQIQEL TEHQKKCTCS MKDQ

Best Arabidopsis Sequence Match ( AT4G09180.1 )
(BLAST)

001: MQPTSVGSSG GGDDGGGRGG GGGLSRSGLS RIRSAPATWL EALLEEDEEE SLKPNLGLTD LLTGNSNDLP TSRGSFEFPI PVEQGLYQQG GFHRQNSTPA
101: DFLSGSDGFI QSFGIQANYD YLSGNIDVSP GSKRSREMEA LFSSPEFTSQ MKGEQSSGQV PTGVSSMSDM NMENLMEDSV AFRVRAKRGC ATHPRSIAER
201: VRRTRISDRI RKLQELVPNM DKQTNTADML EEAVEYVKVL QRQIQELTEE QKRCTCIPKE EQ

Arabidopsis Description

BHLH81Transcription factor bHLH81 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.