Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 4
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g065040.2.1 | Tomato | nucleus | 90.77 | 92.91 |
| KRH44925 | Soybean | nucleus | 33.85 | 56.05 |
| CDY41870 | Canola | nucleus | 52.31 | 55.74 |
| Bra036760.1-P | Field mustard | nucleus | 51.15 | 55.65 |
| CDX91761 | Canola | nucleus | 52.31 | 55.28 |
| AT1G35460.1 | Thale cress | nucleus | 55.0 | 55.21 |
| VIT_18s0041g00690.t01 | Wine grape | mitochondrion, nucleus | 53.08 | 54.98 |
| CDY69278 | Canola | nucleus | 50.77 | 54.55 |
| CDY28415 | Canola | nucleus | 50.38 | 53.91 |
| Bra034421.1-P | Field mustard | nucleus | 50.38 | 53.91 |
| AT4G09180.1 | Thale cress | nucleus | 53.85 | 53.44 |
| CDY61281 | Canola | nucleus | 51.54 | 53.39 |
| Bra028088.1-P | Field mustard | nucleus | 50.77 | 49.62 |
| PGSC0003DMT400021062 | Potato | nucleus | 36.92 | 25.26 |
| PGSC0003DMT400016793 | Potato | nucleus, plastid | 30.77 | 22.99 |
| PGSC0003DMT400065029 | Potato | nucleus | 35.0 | 22.92 |
| PGSC0003DMT400056716 | Potato | nucleus | 33.08 | 19.5 |
| PGSC0003DMT400061284 | Potato | nucleus | 33.46 | 17.79 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400080418 | EnsemblPlantsGene:PGSC0003DMG400031314 | EntrezGene:102596464 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR16223 | PANTHER:PTHR16223:SF104 | PFAM:PF00010 | PFscan:PS50888 | PGSC:PGSC0003DMG400031314 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000294F6C4 | UniProt:M1D3H4 | MapMan:15.5.32 | : |
Description
BHLH transcription factor MYC4 [Source:PGSC_GENE;Acc:PGSC0003DMG400031314]
Coordinates
chr6:-:47019193..47028012
Molecular Weight (calculated)
28513.6 Da
IEP (calculated)
8.248
GRAVY (calculated)
-0.662
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MQRGTAGAGG GGLSRFRSAP ATWLEALLES DTENEVILNP SSTILHTPNK PPPHPSTPKL PELKLETGGA TRFTGDPGLF ESGGSSNFLR QNSSPAEFLS
101: HISSDGYFSN YGIPSSLDYL SPSVDVSQSA KRTRDGDSES SPRKLASQLK GESSGQLHGS GGSLDAEMEN LMDDLVPCKV RAKRGCATHP RSIAERVRRT
201: RISDRIRKLQ ELVPNMDKQT NTADMLEEAV EYVKFLQKQI QVIHEFTPVI EHPKTLWKRK
101: HISSDGYFSN YGIPSSLDYL SPSVDVSQSA KRTRDGDSES SPRKLASQLK GESSGQLHGS GGSLDAEMEN LMDDLVPCKV RAKRGCATHP RSIAERVRRT
201: RISDRIRKLQ ELVPNMDKQT NTADMLEEAV EYVKFLQKQI QVIHEFTPVI EHPKTLWKRK
001: MQSTHISGGS SGGGGGGGGE VSRSGLSRIR SAPATWIETL LEEDEEEGLK PNLCLTELLT GNNNSGGVIT SRDDSFEFLS SVEQGLYNHH QGGGFHRQNS
101: SPADFLSGSG SGTDGYFSNF GIPANYDYLS TNVDISPTKR SRDMETQFSS QLKEEQMSGG ISGMMDMNMD KIFEDSVPCR VRAKRGCATH PRSIAERVRR
201: TRISDRIRRL QELVPNMDKQ TNTADMLEEA VEYVKALQSQ IQELTEQQKR CKCKPKEEQ
101: SPADFLSGSG SGTDGYFSNF GIPANYDYLS TNVDISPTKR SRDMETQFSS QLKEEQMSGG ISGMMDMNMD KIFEDSVPCR VRAKRGCATH PRSIAERVRR
201: TRISDRIRRL QELVPNMDKQ TNTADMLEEA VEYVKALQSQ IQELTEQQKR CKCKPKEEQ
Arabidopsis Description
BHLH80Transcription factor bHLH80 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8P8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.