Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400061284 | Potato | nucleus | 93.56 | 86.09 |
| Solyc11g056650.1.1 | Tomato | nucleus | 54.67 | 55.78 |
| Zm00001d023444_P001 | Maize | cytosol | 5.78 | 55.32 |
| VIT_06s0004g01740.t01 | Wine grape | nucleus | 34.44 | 52.19 |
| KRH38466 | Soybean | nucleus | 9.11 | 48.81 |
| Zm00001d051122_P001 | Maize | nucleus | 14.89 | 44.08 |
| KRH23160 | Soybean | nucleus | 36.67 | 40.44 |
| KRH24679 | Soybean | nucleus | 37.11 | 40.24 |
| GSMUA_Achr7P20490_001 | Banana | nucleus | 31.33 | 40.17 |
| HORVU5Hr1G073170.5 | Barley | cytosol, nucleus, plastid | 16.22 | 39.89 |
| KRH29679 | Soybean | nucleus | 36.44 | 39.23 |
| Solyc10g079050.1.1 | Tomato | nucleus | 32.89 | 38.95 |
| Zm00001d006578_P001 | Maize | nucleus | 31.11 | 38.15 |
| Zm00001d031441_P001 | Maize | nucleus | 32.0 | 37.89 |
| TraesCS7A01G245800.1 | Wheat | nucleus | 32.22 | 37.86 |
| TraesCS7B01G145800.1 | Wheat | nucleus, plastid | 32.44 | 37.73 |
| TraesCS7D01G244300.1 | Wheat | nucleus, plastid | 32.22 | 37.56 |
| HORVU7Hr1G050530.1 | Barley | cytosol | 22.44 | 37.55 |
| Solyc06g065040.2.1 | Tomato | nucleus | 20.67 | 36.61 |
| Os08t0506700-01 | Rice | nucleus | 32.22 | 36.34 |
| GSMUA_Achr5P22310_001 | Banana | nucleus | 30.89 | 35.92 |
| KRH10175 | Soybean | nucleus | 32.44 | 35.44 |
| Bra018896.1-P | Field mustard | nucleus | 28.22 | 35.18 |
| Solyc01g086870.2.1 | Tomato | nucleus | 31.78 | 35.14 |
| AT1G51140.1 | Thale cress | nucleus | 29.56 | 35.09 |
| CDY25213 | Canola | nucleus | 28.22 | 34.89 |
| CDY22828 | Canola | nucleus | 27.78 | 34.63 |
| Zm00001d021748_P001 | Maize | plastid | 28.67 | 34.49 |
| Zm00001d006022_P001 | Maize | nucleus, plastid | 30.0 | 33.25 |
| Os09t0487900-01 | Rice | nucleus | 29.56 | 33.17 |
| Zm00001d020932_P001 | Maize | nucleus | 30.0 | 33.09 |
| TraesCS5B01G264300.1 | Wheat | plastid | 29.78 | 32.68 |
| TraesCS5A01G264800.1 | Wheat | plastid | 29.56 | 32.52 |
| TraesCS5D01G272800.1 | Wheat | plastid | 29.78 | 32.29 |
| GSMUA_Achr9P27780_001 | Banana | nucleus | 29.56 | 32.05 |
| OQU80938 | Sorghum | nucleus | 32.67 | 31.61 |
| GSMUA_Achr3P11110_001 | Banana | nucleus | 27.33 | 31.22 |
| Solyc09g098110.2.1 | Tomato | nucleus, plastid | 24.44 | 30.81 |
| KXG35904 | Sorghum | nucleus, plastid | 30.0 | 30.41 |
| HORVU2Hr1G073240.1 | Barley | cytosol | 10.44 | 28.66 |
| HORVU7Hr1G047180.1 | Barley | plastid | 15.11 | 27.09 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | ncoils:Coil | GO:GO:0001046 | GO:GO:0001228 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006366 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | UniProt:K4DI35 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 |
| PANTHER:PTHR16223:SF69 | SMART:SM00353 | SUPFAM:SSF47459 | EnsemblPlantsGene:Solyc12g100140.1 | EnsemblPlants:Solyc12g100140.1.1 | UniParc:UPI000276AB6F |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr12:+:66980909..66983630
Molecular Weight (calculated)
49420.8 Da
IEP (calculated)
5.179
GRAVY (calculated)
-0.800
Length
450 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEKSMDHRS HQQQQMTSGL TRYRSAPSSY FTNLLSSNNP AGVSGGSGNC GYARDDFDQL LNPHASNSGI KQVFDRFVAN IGPQDSNPDG LIDDTQQNQN
101: PMSNMDVRSE VLAPMKQEHE AQMNYQCQEQ QSQNSQFVAP VKQEIAQQNS DYSLASQMNY QNHNATDFTS GMDNFGRYNR LNHTKMDGGF GTGSSDSNLT
201: RYNSSPAGFF ALVNIENEYG ALRGIGSYGA GSGTNAAGEV SFSNPSRFSS QTALPSGQPT SSGLLAPISE FGAKSIEESR RGHESFGKGH KSDESYMAGF
301: ALPSWDDSQI LTDDFLQVPE DDESGSFSNV NASDNQSSEG RARPPTLLSH LSLPQTSAEL SAMEKLLQDS VPCKVRAKRG CATHPRSIAE RVRRTRISER
401: MRKLQELVPN MDKQTNTADM LDFAADYIKE LETQVKALSE TRSKCTCLHE
101: PMSNMDVRSE VLAPMKQEHE AQMNYQCQEQ QSQNSQFVAP VKQEIAQQNS DYSLASQMNY QNHNATDFTS GMDNFGRYNR LNHTKMDGGF GTGSSDSNLT
201: RYNSSPAGFF ALVNIENEYG ALRGIGSYGA GSGTNAAGEV SFSNPSRFSS QTALPSGQPT SSGLLAPISE FGAKSIEESR RGHESFGKGH KSDESYMAGF
301: ALPSWDDSQI LTDDFLQVPE DDESGSFSNV NASDNQSSEG RARPPTLLSH LSLPQTSAEL SAMEKLLQDS VPCKVRAKRG CATHPRSIAE RVRRTRISER
401: MRKLQELVPN MDKQTNTADM LDFAADYIKE LETQVKALSE TRSKCTCLHE
001: MESEFQQHHF LLHDHQHQRP RNSGLIRYQS APSSYFSSFG ESIEEFLDRP TSPETERILS GFLQTTDTSD NVDSFLHHTF NSDGTEKKPP EVKTEDEDAE
101: IPVTATATAM EVVVSGDGEI SVNPEVSIGY VASVSRNKRP REKDDRTPVN NLARHNSSPA GLFSSIDVET AYAAVMKSMG GFGGSNVMST SNTEASSLTP
201: RSKLLPPTSR AMSPISEVDV KPGFSSRLPP RTLSGGFNRS FGNEGSASSK LTALARTQSG GLDQYKTKDE DSASRRPPLA HHMSLPKSLS DIEQLLSDSI
301: PCKIRAKRGC ATHPRSIAER VRRTKISERM RKLQDLVPNM DTQTNTADML DLAVQYIKDL QEQVKALEES RARCRCSSA
101: IPVTATATAM EVVVSGDGEI SVNPEVSIGY VASVSRNKRP REKDDRTPVN NLARHNSSPA GLFSSIDVET AYAAVMKSMG GFGGSNVMST SNTEASSLTP
201: RSKLLPPTSR AMSPISEVDV KPGFSSRLPP RTLSGGFNRS FGNEGSASSK LTALARTQSG GLDQYKTKDE DSASRRPPLA HHMSLPKSLS DIEQLLSDSI
301: PCKIRAKRGC ATHPRSIAER VRRTKISERM RKLQDLVPNM DTQTNTADML DLAVQYIKDL QEQVKALEES RARCRCSSA
Arabidopsis Description
BHLH122Transcription factor bHLH122 [Source:UniProtKB/Swiss-Prot;Acc:Q9C690]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.