Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G264800.1 | Wheat | plastid | 92.93 | 93.15 |
| TraesCS5D01G272800.1 | Wheat | plastid | 93.17 | 92.05 |
| Os09t0487900-01 | Rice | nucleus | 64.63 | 66.08 |
| Zm00001d020932_P001 | Maize | nucleus | 65.61 | 65.93 |
| Zm00001d006022_P001 | Maize | nucleus, plastid | 62.68 | 63.3 |
| TraesCS7B01G145800.1 | Wheat | nucleus, plastid | 57.56 | 60.98 |
| KXG35904 | Sorghum | nucleus, plastid | 64.15 | 59.23 |
| HORVU5Hr1G073170.5 | Barley | cytosol, nucleus, plastid | 23.17 | 51.91 |
| KRH38466 | Soybean | nucleus | 9.76 | 47.62 |
| VIT_06s0004g01740.t01 | Wine grape | nucleus | 31.71 | 43.77 |
| GSMUA_Achr3P11110_001 | Banana | nucleus | 36.83 | 38.32 |
| CDY53498 | Canola | nucleus, plastid | 30.24 | 38.15 |
| Bra004678.1-P | Field mustard | nucleus, plastid | 30.24 | 38.04 |
| CDX79884 | Canola | nucleus, plastid | 30.24 | 37.92 |
| VIT_08s0007g07810.t01 | Wine grape | nucleus | 35.85 | 37.31 |
| VIT_13s0064g01290.t01 | Wine grape | nucleus, plastid | 34.39 | 36.81 |
| KRH71888 | Soybean | nucleus, plastid | 33.9 | 36.77 |
| KRH23160 | Soybean | nucleus | 36.59 | 36.76 |
| AT2G42280.3 | Thale cress | nucleus | 31.95 | 36.39 |
| PGSC0003DMT400021062 | Potato | nucleus | 33.66 | 36.32 |
| CDY14822 | Canola | nucleus | 30.24 | 35.94 |
| Solyc10g079050.1.1 | Tomato | nucleus | 33.17 | 35.79 |
| CDY47961 | Canola | nucleus | 30.24 | 35.63 |
| KRH24679 | Soybean | nucleus | 35.85 | 35.42 |
| Bra016886.1-P | Field mustard | nucleus | 30.0 | 35.34 |
| GSMUA_Achr9P27780_001 | Banana | nucleus | 35.61 | 35.18 |
| KRH33007 | Soybean | nucleus, plastid | 32.68 | 34.9 |
| KRH29679 | Soybean | nucleus | 35.37 | 34.69 |
| KRH67021 | Soybean | nucleus | 32.68 | 34.63 |
| PGSC0003DMT400065029 | Potato | nucleus | 33.41 | 34.51 |
| KRG95337 | Soybean | nucleus | 31.71 | 33.94 |
| Solyc01g086870.2.1 | Tomato | nucleus | 32.68 | 32.92 |
| AT1G51140.1 | Thale cress | nucleus | 30.0 | 32.45 |
| TraesCS6B01G244800.1 | Wheat | nucleus | 23.9 | 32.34 |
| CDY22828 | Canola | nucleus | 28.29 | 32.13 |
| Bra018896.1-P | Field mustard | nucleus | 28.29 | 32.13 |
| CDY25213 | Canola | nucleus | 28.05 | 31.59 |
| KRH10175 | Soybean | nucleus | 31.46 | 31.31 |
| KRH27501 | Soybean | nucleus | 31.71 | 29.95 |
| Solyc12g100140.1.1 | Tomato | nucleus | 32.68 | 29.78 |
| KRH20846 | Soybean | nucleus | 31.46 | 29.45 |
| PGSC0003DMT400056716 | Potato | nucleus | 30.98 | 28.8 |
| Solyc11g056650.1.1 | Tomato | nucleus | 30.49 | 28.34 |
| TraesCS3B01G426900.1 | Wheat | nucleus | 25.37 | 28.03 |
| PGSC0003DMT400061284 | Potato | nucleus | 33.41 | 28.02 |
| KRH43476 | Soybean | nucleus | 30.49 | 27.78 |
| KRH13908 | Soybean | extracellular, nucleus | 29.51 | 26.54 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G264300.1 | EnsemblPlantsGene:TraesCS5B01G264300 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR16223 | PANTHER:PTHR16223:SF55 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | TIGR:cd00083 | MapMan:15.5.32 | : | : | : |
Description
No Description!
Coordinates
chr5B:+:448465268..448467854
Molecular Weight (calculated)
43087.8 Da
IEP (calculated)
8.928
GRAVY (calculated)
-0.557
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGAPLSKDL NLPVQHQPAA NGVRTPPQMS SPGLLRYRSA PSAMFGDVCG DFLPASAGAG VGHRQGSPDH AADTGFARLL SGHHTQHQPE MRDKPPRPAA
101: SHFAEDAAAS MASQQQQLMY QSQQQMAAME GLFRTASSGA TDPVATGGGN DSLLRQSSSP AGFLNHLNMD NGYGSMLRAG MGGAAGGGGY RNGDTRLKGQ
201: LSFSSRQGSV MSQISEMVSE ELGDGDSGDD EAGSNGAGYG GIPGYPVVAP SAGAGWDEPS PSPSPSLLTS DGLPGPAAKR RPRDGPANGA ARQLKPQFSL
301: PVGSKPSPEI AAIEKFLQFQ DSVPCKIRAK RGCATHPRSI AERVRRTKIS ERIRKLQELV PNMEKQTNTS DMLDLAVDYI KELQMQVKVM KDGRASCTCA
401: AGRPPRSFAS
101: SHFAEDAAAS MASQQQQLMY QSQQQMAAME GLFRTASSGA TDPVATGGGN DSLLRQSSSP AGFLNHLNMD NGYGSMLRAG MGGAAGGGGY RNGDTRLKGQ
201: LSFSSRQGSV MSQISEMVSE ELGDGDSGDD EAGSNGAGYG GIPGYPVVAP SAGAGWDEPS PSPSPSLLTS DGLPGPAAKR RPRDGPANGA ARQLKPQFSL
301: PVGSKPSPEI AAIEKFLQFQ DSVPCKIRAK RGCATHPRSI AERVRRTKIS ERIRKLQELV PNMEKQTNTS DMLDLAVDYI KELQMQVKVM KDGRASCTCA
401: AGRPPRSFAS
001: MDSNNHLYDP NPTGSGLLRF RSAPSSVLAA FVDDDKIGFD SDRLLSRFVT SNGVNGDLGS PKFEDKSPVS LTNTSVSYAA TLPPPPQLEP SSFLGLPPHY
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK ILNDNRANCK CMNKEKKSI
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK ILNDNRANCK CMNKEKKSI
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G42280]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.