Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d006022_P001 | Maize | nucleus, plastid | 88.48 | 88.92 |
| KXG35904 | Sorghum | nucleus, plastid | 87.99 | 80.86 |
| Os09t0487900-01 | Rice | nucleus | 67.89 | 69.08 |
| TraesCS5A01G264800.1 | Wheat | plastid | 66.67 | 66.5 |
| Zm00001d023444_P001 | Maize | cytosol | 7.6 | 65.96 |
| Zm00001d006578_P001 | Maize | nucleus | 59.31 | 65.94 |
| TraesCS5B01G264300.1 | Wheat | plastid | 65.93 | 65.61 |
| TraesCS5D01G272800.1 | Wheat | plastid | 65.69 | 64.58 |
| Zm00001d031441_P001 | Maize | nucleus | 56.62 | 60.79 |
| Zm00001d021748_P001 | Maize | plastid | 55.39 | 60.43 |
| Zm00001d051122_P001 | Maize | nucleus | 20.83 | 55.92 |
| KRH38466 | Soybean | nucleus | 11.03 | 53.57 |
| VIT_06s0004g01740.t01 | Wine grape | nucleus | 34.31 | 47.14 |
| HORVU5Hr1G073170.5 | Barley | cytosol, nucleus, plastid | 20.83 | 46.45 |
| VIT_08s0007g07810.t01 | Wine grape | nucleus | 41.67 | 43.15 |
| KRH23160 | Soybean | nucleus | 41.18 | 41.18 |
| GSMUA_Achr3P11110_001 | Banana | nucleus | 39.46 | 40.86 |
| KRH71888 | Soybean | nucleus, plastid | 37.25 | 40.21 |
| PGSC0003DMT400021062 | Potato | nucleus | 36.52 | 39.21 |
| Bra004678.1-P | Field mustard | nucleus, plastid | 31.13 | 38.96 |
| Solyc10g079050.1.1 | Tomato | nucleus | 36.03 | 38.68 |
| CDX79884 | Canola | nucleus, plastid | 30.88 | 38.53 |
| CDY53498 | Canola | nucleus, plastid | 30.64 | 38.46 |
| CDY14822 | Canola | nucleus | 32.35 | 38.26 |
| KRH33007 | Soybean | nucleus, plastid | 35.78 | 38.02 |
| CDY47961 | Canola | nucleus | 32.11 | 37.64 |
| Bra016886.1-P | Field mustard | nucleus | 31.86 | 37.36 |
| KRH24679 | Soybean | nucleus | 37.99 | 37.35 |
| VIT_13s0064g01290.t01 | Wine grape | nucleus, plastid | 35.05 | 37.34 |
| KRH29679 | Soybean | nucleus | 38.24 | 37.32 |
| KRG95337 | Soybean | nucleus | 34.8 | 37.08 |
| GSMUA_Achr9P27780_001 | Banana | nucleus | 37.5 | 36.87 |
| KRH67021 | Soybean | nucleus | 34.8 | 36.69 |
| AT2G42280.3 | Thale cress | nucleus | 31.86 | 36.11 |
| PGSC0003DMT400065029 | Potato | nucleus | 34.07 | 35.01 |
| AT1G51140.1 | Thale cress | nucleus | 31.86 | 34.3 |
| KRH10175 | Soybean | nucleus | 34.07 | 33.74 |
| CDY22828 | Canola | nucleus | 29.66 | 33.52 |
| Bra018896.1-P | Field mustard | nucleus | 29.66 | 33.52 |
| Solyc01g086870.2.1 | Tomato | nucleus | 33.33 | 33.42 |
| CDY25213 | Canola | nucleus | 29.66 | 33.24 |
| KRH27501 | Soybean | nucleus | 32.84 | 30.88 |
| KRH20846 | Soybean | nucleus | 33.09 | 30.82 |
| Zm00001d017138_P001 | Maize | nucleus | 24.51 | 30.77 |
| Solyc12g100140.1.1 | Tomato | nucleus | 33.09 | 30.0 |
| Zm00001d042482_P001 | Maize | nucleus | 26.23 | 29.56 |
| Solyc11g056650.1.1 | Tomato | nucleus | 31.86 | 29.48 |
| KRH43476 | Soybean | nucleus | 32.35 | 29.33 |
| PGSC0003DMT400056716 | Potato | nucleus | 31.62 | 29.25 |
| KRH13908 | Soybean | extracellular, nucleus | 31.13 | 27.85 |
| PGSC0003DMT400061284 | Potato | nucleus | 33.33 | 27.81 |
Protein Annotations
| EntrezGene:100284866 | MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:B6TY97 | ncoils:Coil | EMBL:EU969962 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | ProteinID:ONM55829.1 | ProteinID:ONM55830.1 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF55 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000182ED53 |
| EnsemblPlantsGene:Zm00001d020932 | EnsemblPlants:Zm00001d020932_P001 | EnsemblPlants:Zm00001d020932_T001 | InterPro:bHLH_dom | SEG:seg | : |
Description
bHLH-transcription factor 146Helix-loop-helix DNA-binding domain containing protein
Coordinates
chr7:+:136986209..136988745
Molecular Weight (calculated)
42599.3 Da
IEP (calculated)
8.779
GRAVY (calculated)
-0.509
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGAPLPKDL NLPAALPQPT RTPPQQQMGS PGLLRYRSAP STLLGEVMCG GDQDFPAAGG AGHGPPDHAA ADNVLARFLA GHHSETRDCK PPRPAAAAHF
101: MDEAAVASMA ASQQQQLMYQ SQQEQQMAAM EGLYRNVSSG GTEHGAAVGA GNNSLIRQSS SPAGFLNHLN MDNGYGSMLR VGMGGGGFRN GVSDARLKGQ
201: LSFSSRQGSV MSQISEVGSE ELDGGGGSGS PEAAGSNASG AARGYSGIPG YPMGGLASGA WPDEASPSPT SGAKRPRDSG PALQQPLAPQ LSLPSGKNKG
301: GRAASAEMAA IEKFLQFQDA VPCKIRAKRG CATHPRSIAE RVRRTKISER IRKLQELVPN MEKQTNTADM LDLAVDYIKD LQKQVKVLND GRASCTCSAG
401: ELQGQFTR
101: MDEAAVASMA ASQQQQLMYQ SQQEQQMAAM EGLYRNVSSG GTEHGAAVGA GNNSLIRQSS SPAGFLNHLN MDNGYGSMLR VGMGGGGFRN GVSDARLKGQ
201: LSFSSRQGSV MSQISEVGSE ELDGGGGSGS PEAAGSNASG AARGYSGIPG YPMGGLASGA WPDEASPSPT SGAKRPRDSG PALQQPLAPQ LSLPSGKNKG
301: GRAASAEMAA IEKFLQFQDA VPCKIRAKRG CATHPRSIAE RVRRTKISER IRKLQELVPN MEKQTNTADM LDLAVDYIKD LQKQVKVLND GRASCTCSAG
401: ELQGQFTR
001: MESEFQQHHF LLHDHQHQRP RNSGLIRYQS APSSYFSSFG ESIEEFLDRP TSPETERILS GFLQTTDTSD NVDSFLHHTF NSDGTEKKPP EVKTEDEDAE
101: IPVTATATAM EVVVSGDGEI SVNPEVSIGY VASVSRNKRP REKDDRTPVN NLARHNSSPA GLFSSIDVET AYAAVMKSMG GFGGSNVMST SNTEASSLTP
201: RSKLLPPTSR AMSPISEVDV KPGFSSRLPP RTLSGGFNRS FGNEGSASSK LTALARTQSG GLDQYKTKDE DSASRRPPLA HHMSLPKSLS DIEQLLSDSI
301: PCKIRAKRGC ATHPRSIAER VRRTKISERM RKLQDLVPNM DTQTNTADML DLAVQYIKDL QEQVKALEES RARCRCSSA
101: IPVTATATAM EVVVSGDGEI SVNPEVSIGY VASVSRNKRP REKDDRTPVN NLARHNSSPA GLFSSIDVET AYAAVMKSMG GFGGSNVMST SNTEASSLTP
201: RSKLLPPTSR AMSPISEVDV KPGFSSRLPP RTLSGGFNRS FGNEGSASSK LTALARTQSG GLDQYKTKDE DSASRRPPLA HHMSLPKSLS DIEQLLSDSI
301: PCKIRAKRGC ATHPRSIAER VRRTKISERM RKLQDLVPNM DTQTNTADML DLAVQYIKDL QEQVKALEES RARCRCSSA
Arabidopsis Description
BHLH122Transcription factor bHLH122 [Source:UniProtKB/Swiss-Prot;Acc:Q9C690]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.